Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34175 Trifolium pratense HOM05D006511 ORTHO05D007567 1.3e-160 569.7 297 100.0
Psat7g227400 Pisum sativum HOM05D006511 ORTHO05D007567 8.3e-115 417.5 288 79.5
Ca_13616_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 5.8e-92 341.7 309 66.0
Ca_30187_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 5.8e-92 341.7 309 66.0
Phvul.011G215700 Phaseolus vulgaris HOM05D006511 ORTHO05D007567 6.4e-91 338.2 291 66.0
Lj3g0014137 Lotus japonicus HOM05D006511 ORTHO05D007567 5.5e-82 308.5 288 62.5
arahy.Tifrunner.gnm1.ann1.HN79E8 Arachis hypogaea HOM05D006511 ORTHO05D007567 2.1e-81 306.6 333 54.7
Glyma.12G241400 Glycine max HOM05D006511 ORTHO05D007567 1.1e-79 300.8 274 62.0
VMungo1127G0740 Vigna mungo HOM05D006511 ORTHO05D007567 5.3e-77 292.0 288 60.8
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 1.9e-71 273.5 290 54.1
RcHm_v2.0_Chr6g0249621 Rosa chinensis HOM05D006511 ORTHO05D007567 5.7e-71 271.9 290 51.7
CiPaw.03G012800 Carya illinoinensis HOM05D006511 ORTHO05D007567 6.3e-70 268.5 290 52.8
FAN24G0692 Fragaria x ananassa HOM05D006511 ORTHO05D007567 6.3e-70 268.5 290 51.4
FAN19G0686 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.8e-69 266.9 289 51.6
FvH4_2g00330 Fragaria vesca HOM05D006511 ORTHO05D007567 5.3e-69 265.4 290 50.7
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 5.3e-69 265.4 289 50.9
Thecc.08G168400 Theobroma cacao HOM05D006511 ORTHO05D007567 1.4e-66 257.3 288 50.7
CANSAT56G0749 Cannabis sativa HOM05D006511 ORTHO05D007567 5.5e-66 255.4 285 51.2
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 7.2e-66 255.0 290 49.7
MD05G1006300 Malus domestica HOM05D006511 ORTHO05D007567 1.8e-64 250.4 278 51.1
FAN20G0885 Fragaria x ananassa HOM05D006511 ORTHO05D007567 5.1e-64 248.8 297 47.8
Manes.18G109250 Manihot esculenta HOM05D006511 ORTHO05D007567 2.5e-63 246.5 289 51.2
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 7.4e-63 245.0 288 50.0
Sed0008597 Sechium edule HOM05D006511 ORTHO05D007567 1.7e-62 243.8 302 48.3
Prupe.8G003600 Prunus persica HOM05D006511 ORTHO05D007567 3.7e-62 242.7 269 51.3
Sabra13G0081400 Salix brachista HOM05D006511 ORTHO05D007567 3.7e-62 242.7 289 48.8
Cfa008039 Carpinus fangiana HOM05D006511 ORTHO05D007567 1.2e-60 237.7 288 49.3
TAR636G2957 Trochodendron aralioides HOM05D006511 ORTHO05D007567 3.4e-60 236.1 290 49.7
HanXRQChr04g0102481 Helianthus annuus HOM05D006511 ORTHO05D007567 3.8e-59 232.6 288 45.1
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 5.0e-59 232.3 290 46.2
Gohir.D08G249200 Gossypium hirsutum HOM05D006511 ORTHO05D007567 1.1e-58 231.1 287 48.4
Gorai.004G265800 Gossypium raimondii HOM05D006511 ORTHO05D007567 1.1e-58 231.1 287 48.4
TWI12G0802 Tripterygium wilfordii HOM05D006511 ORTHO05D007567 7.2e-58 228.4 270 48.9
PSO384G4286 Papaver somniferum HOM05D006511 ORTHO05D007567 2.1e-57 226.9 290 46.6
Hund17299 Selenicereus undatus HOM05D006511 ORTHO05D007567 2.1e-57 226.9 285 46.3
THA.LOC104815798 Tarenaya hassleriana HOM05D006511 ORTHO05D007567 1.1e-55 221.1 286 45.1
CARHR032940 Cardamine hirsuta HOM05D006511 ORTHO05D007567 2.0e-55 220.3 287 45.3
Medtr1g067710 Medicago truncatula HOM05D006511 ORTHO05D007567 2.0e-55 220.3 131 87.0
Sc01g0000050 Simmondsia chinensis HOM05D006511 ORTHO05D007567 2.6e-55 219.9 286 44.1
HanXRQChr04g0102471 Helianthus annuus HOM05D006511 ORTHO05D007567 4.4e-55 219.2 281 44.1
Lsat_1_v5_gn_1_24541 Lactuca sativa HOM05D006511 ORTHO05D007567 4.4e-55 219.2 291 44.7
DCAR_014062 Daucus carota HOM05D006511 ORTHO05D007567 5.7e-55 218.8 290 46.2
Medtr1g067720 Medicago truncatula HOM05D006511 ORTHO05D007567 7.4e-55 218.4 128 92.2
Nn5g27238 Nelumbo nucifera HOM05D006511 ORTHO05D007567 1.3e-54 217.6 292 42.8
Carub.0001s3169 Capsella rubella HOM05D006511 ORTHO05D007567 6.3e-54 215.3 288 44.4
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 8.2e-54 214.9 271 46.9
AT1G33500 Arabidopsis thaliana HOM05D006511 ORTHO05D007567 2.4e-53 213.4 288 43.8
BcaB03g13696 Brassica carinata HOM05D006511 ORTHO05D007567 2.6e-52 209.9 287 42.9
BcaC05g27802 Brassica carinata HOM05D006511 ORTHO05D007567 2.6e-52 209.9 287 43.2
Sp1g28980 Schrenkiella parvula HOM05D006511 ORTHO05D007567 2.6e-52 209.9 288 43.8
Haze_13990 Corylus avellana HOM05D006511 ORTHO05D007567 2.2e-51 206.8 269 47.6
Gohir.A08G228900 Gossypium hirsutum HOM05D006511 ORTHO05D007567 3.8e-51 206.1 287 44.9
SGA_v2.0_scaffold118G32636 Striga asiatica HOM05D006511 ORTHO05D007567 4.2e-50 202.6 288 41.3
ECA247G1184 Erigeron canadensis HOM05D006511 ORTHO05D007567 1.2e-49 201.1 281 42.7
MBI15_g27824_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 1.6e-49 200.7 292 43.5
BraA05t21311Z Brassica rapa HOM05D006511 ORTHO05D007567 2.1e-49 200.3 302 40.7
BolC5t32531H Brassica oleracea HOM05D006511 ORTHO05D007567 3.6e-49 199.5 312 40.1
Migut.C01397 Erythranthe guttata HOM05D006511 ORTHO05D007567 4.7e-49 199.1 288 41.3
C05p38000 Brassica napus HOM05D006511 ORTHO05D007567 3.9e-48 196.1 312 39.7
AUR62038542 Chenopodium quinoa HOM05D006511 ORTHO05D007567 2.6e-47 193.4 267 44.2
MELO3C008102.2 Cucumis melo HOM05D006511 ORTHO05D007567 5.7e-47 192.2 289 42.2
MBI15_g27821_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 9.7e-47 191.4 289 42.2
Solyc11g045100.2 Solanum lycopersicum HOM05D006511 ORTHO05D007567 9.7e-47 191.4 289 40.5
Sopen11g020540 Solanum pennellii HOM05D006511 ORTHO05D007567 3.7e-46 189.5 289 40.5
ClCG11G008290 Citrullus lanatus HOM05D006511 ORTHO05D007567 4.1e-45 186.0 361 37.7
FvH4_2g04930 Fragaria vesca HOM05D006511 ORTHO05D007567 1.0e-43 181.4 229 46.3
Aa31LG6G7970 Aethionema arabicum HOM05D006511 ORTHO05D007567 1.3e-43 181.0 317 38.2
FAN24G3334 Fragaria x ananassa HOM05D006511 ORTHO05D007567 2.2e-43 180.3 229 46.3
SalBow7G4276 Salvia bowleyana HOM05D006511 ORTHO05D007567 2.7e-41 173.3 336 34.2
Atru.chr13.2578 Acer truncatum HOM05D006511 ORTHO05D007567 6.1e-41 172.2 285 38.9
Thhalv10008295m.g Eutrema salsugineum HOM05D006511 ORTHO05D007567 2.3e-40 170.2 324 36.7
arahy.Tifrunner.gnm1.ann1.VJ45CS Arachis hypogaea HOM05D006511 ORTHO05D007567 5.2e-40 169.1 129 69.8
EL10Ac1g01283 Beta vulgaris HOM05D006511 ORTHO05D007567 2.0e-39 167.2 286 38.1
PGSC0003DMG401019059 Solanum tuberosum HOM05D006511 ORTHO05D007567 1.3e-38 164.5 271 39.1
CsaV3_2G033310 Cucumis sativus L. HOM05D006511 ORTHO05D007567 4.8e-38 162.5 295 38.0
Hma1.2p1_1405F.1_g281380 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 8.3e-38 161.8 128 66.4
arahy.Tifrunner.gnm1.ann1.FKD4F4 Arachis hypogaea HOM05D006511 ORTHO05D007567 2.4e-37 160.2 114 71.9
FAN20G1821 Fragaria x ananassa HOM05D006511 ORTHO05D007567 5.3e-37 159.1 218 43.6
COL.COLO4_05796 Corchorus olitorius HOM05D006511 ORTHO05D007567 4.5e-36 156.0 361 33.8
PGR004G0115 Punica granatum HOM05D006511 ORTHO05D007567 2.2e-35 153.7 253 39.1
Lalb_Chr19g0131901 Lupinus albus HOM05D006511 ORTHO05D007567 2.9e-35 153.3 114 66.7
Sc01g0000180 Simmondsia chinensis HOM05D006511 ORTHO05D007567 6.5e-35 152.1 129 61.2
Aqoxy6G00041 Aquilegia oxysepala HOM05D006511 ORTHO05D007567 1.9e-34 150.6 289 36.0
COL.COLO4_05044 Corchorus olitorius HOM05D006511 ORTHO05D007567 1.2e-33 147.9 215 45.6
HPP92_003819 Vanilla planifolia HOM05D006511 ORTHO05D007567 6.1e-33 145.6 287 33.4
AUR62013391 Chenopodium quinoa HOM05D006511 ORTHO05D007567 8.0e-33 145.2 239 40.6
Ah.13g067720 Amaranthus hybridus HOM05D006511 ORTHO05D007567 3.0e-32 143.3 306 32.4
CDE10G1127 Ceratophyllum demersum HOM05D006511 ORTHO05D007567 4.4e-31 139.4 289 32.5
Ciclev10023919m.g Citrus clementina HOM05D006511 ORTHO05D007567 7.0e-29 132.1 142 52.8
Eucgr.F04079 Eucalyptus grandis HOM05D006511 ORTHO05D007567 7.0e-29 132.1 121 57.9
AL1G47890 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 2.0e-28 130.6 208 38.5
Cc10_g16070 Coffea canephora HOM05D006511 ORTHO05D007567 6.6e-27 125.6 217 35.9
Peaxi162Scf00078g01026 Petunia axillaris HOM05D006511 ORTHO05D007567 1.1e-26 124.8 291 30.6
ATR1204G001 Amborella trichopoda HOM05D006511 ORTHO05D007567 4.7e-25 119.4 202 37.1
Lj8A308G12 Lonicera japonica HOM05D006511 ORTHO05D007567 1.4e-24 117.9 268 35.4
unitig_749.g13868 Utricularia gibba HOM05D006511 ORTHO05D007567 8.9e-24 115.2 285 31.2
Nitab4.5_0001489g0030 Nicotiana tabacum HOM05D006511 ORTHO05D007567 1.3e-22 111.3 267 31.8
Hma1.2p1_1476F.1_g285820 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 3.7e-22 109.8 170 42.4
Zm00001eb028220 Zea mays HOM05D006511 ORTHO05D007567 6.3e-22 109.0 241 31.5
Cpa.g.sc142.8 Carica papaya HOM05D006511 ORTHO05D007567 2.4e-21 107.1 204 36.3
MSTRG.1607 Avicennia marina HOM05D006511 ORTHO05D007567 3.2e-21 106.7 199 32.7
Haze_13992 Corylus avellana HOM05D006511 ORTHO05D007567 4.1e-21 106.3 81 69.1
Lalb_Chr19g0131891 Lupinus albus HOM05D006511 ORTHO05D007567 5.4e-21 105.9 106 59.4
Eucgr.F04078 Eucalyptus grandis HOM05D006511 ORTHO05D007567 5.9e-20 102.4 111 47.7
AL1G48040 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 7.8e-20 102.1 108 48.1
Os08g0320300 Oryza sativa ssp. japonica HOM05D006511 ORTHO05D007567 2.9e-19 100.1 128 42.2
Nitab4.5_0000009g0490 Nicotiana tabacum HOM05D006511 ORTHO05D007567 1.3e-14 84.7 288 26.7
Sc01g0000190 Simmondsia chinensis HOM05D006511 ORTHO05D007567 3.7e-14 83.2 96 42.7
Nn5g27242 Nelumbo nucifera HOM05D006511 ORTHO05D007567 4.9e-14 82.8 84 51.2
vmacro11027 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 4.9e-14 82.8 170 32.9
Ciclev10023084m.g Citrus clementina HOM05D006511 ORTHO05D007567 3.2e-13 80.1 102 44.1
COL.COLO4_36458 Corchorus olitorius HOM05D006511 ORTHO05D007567 4.6e-12 76.3 80 52.5
SMO137G0232 Selaginella moellendorffii HOM05D006511 ORTHO05D007567 5.0e-11 72.8 125 30.4
Haze_13997 Corylus avellana HOM05D006511 ORTHO05D007567 6.6e-11 72.4 63 55.6
Duzib116G0864 Durio zibethinus HOM05D006511 ORTHO05D007567 3.3e-10 70.1 129 36.4
Lalb_Chr19g0131881 Lupinus albus HOM05D006511 ORTHO05D007567 5.6e-10 69.3 44 75.0
Hma1.2p1_1476F.1_g285810 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 7.3e-10 68.9 52 61.5
Haze_13999 Corylus avellana HOM05D006511 ORTHO05D007567 4.7e-09 66.2 55 61.8
AagrBONN_evm.TU.Sc2ySwM_362.2028 Anthoceros agrestis HOM05D006511 ORTHO05D007567 9.8e-07 58.5 131 27.5
vmacro11028 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 9.8e-07 58.5 56 46.4
Lsat_1_v5_gn_0_19000 Lactuca sativa HOM05D006511 ORTHO05D007567 2.9e-06 57.0 122 33.6
Mapoly0161s0026 Marchantia polymorpha HOM05D006511 ORTHO05D007567 8.3e-06 55.5 286 19.9


User provided reference genes

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