Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34020 Trifolium pratense HOM05D000211 ORTHO05D002682 8.0e-200 700.3 367 100.0
Medtr4g083360 Medicago truncatula HOM05D000211 ORTHO05D002682 4.9e-141 505.0 318 83.3
Psat7g133280 Pisum sativum HOM05D000211 ORTHO05D002682 1.0e-130 470.7 309 83.2
Lj4g0015151 Lotus japonicus HOM05D000211 ORTHO05D002682 5.3e-127 458.4 309 82.2
Lalb_Chr16g0385411 Lupinus albus HOM05D000211 ORTHO05D002682 1.0e-122 444.1 308 75.3
RcHm_v2.0_Chr5g0084021 Rosa chinensis HOM05D000211 ORTHO05D002682 4.5e-118 428.7 310 72.3
arahy.Tifrunner.gnm1.ann1.NBIC4D Arachis hypogaea HOM05D000211 ORTHO05D002682 8.4e-117 424.5 311 71.4
arahy.Tifrunner.gnm1.ann1.GBZS02 Arachis hypogaea HOM05D000211 ORTHO05D002682 1.4e-116 423.7 311 73.3
MD11G1001700 Malus domestica HOM05D000211 ORTHO05D002682 4.2e-116 422.2 308 70.1
Glyma.07G224600 Glycine max HOM05D000211 ORTHO05D002682 7.1e-116 421.4 322 71.1
MD03G1001800 Malus domestica HOM05D000211 ORTHO05D002682 3.5e-115 419.1 311 68.8
CiPaw.13G179000 Carya illinoinensis HOM05D000211 ORTHO05D002682 6.0e-115 418.3 311 70.1
Cfa009535 Carpinus fangiana HOM05D000211 ORTHO05D002682 1.0e-114 417.5 313 70.6
FAN16G2463 Fragaria x ananassa HOM05D000211 ORTHO05D002682 1.1e-113 414.1 310 67.4
FAN11G1410 Fragaria x ananassa HOM05D000211 ORTHO05D002682 4.3e-113 412.1 310 66.8
Phvul.002G101100 Phaseolus vulgaris HOM05D000211 ORTHO05D002682 6.3e-112 408.3 317 69.1
GSVIVG01025503001 Vitis vinifera HOM05D000211 ORTHO05D002682 6.3e-112 408.3 308 67.5
CANSAT11G1344 Cannabis sativa HOM05D000211 ORTHO05D002682 1.1e-111 407.5 325 63.7
Glyma.20G024500 Glycine max HOM05D000211 ORTHO05D002682 3.1e-111 406.0 317 71.3
FvH4_3g45911 Fragaria vesca HOM05D000211 ORTHO05D002682 4.1e-111 405.6 310 66.1
PSO339G3993 Papaver somniferum HOM05D000211 ORTHO05D002682 2.0e-110 403.3 309 65.0
Dinv13488 Davidia involucrata HOM05D000211 ORTHO05D002682 2.6e-110 402.9 309 65.4
TWI34G0611 Tripterygium wilfordii HOM05D000211 ORTHO05D002682 1.3e-109 400.6 308 67.5
Haze_22924 Corylus avellana HOM05D000211 ORTHO05D002682 1.7e-109 400.2 336 66.4
Lalb_Chr05g0219841 Lupinus albus HOM05D000211 ORTHO05D002682 3.8e-109 399.1 308 73.1
QL01p007953 Quercus lobata HOM05D000211 ORTHO05D002682 6.5e-109 398.3 309 68.6
Ca_18790_v3 Cicer arietinum L. HOM05D000211 ORTHO05D002682 1.4e-108 397.1 309 76.7
ClCG02G024450 Citrullus lanatus HOM05D000211 ORTHO05D002682 9.3e-108 394.4 304 66.1
COL.COLO4_35073 Corchorus olitorius HOM05D000211 ORTHO05D002682 2.3e-106 389.8 313 65.5
FAN25G3011 Fragaria x ananassa HOM05D000211 ORTHO05D002682 2.3e-106 389.8 289 67.5
Thecc.09G197900 Theobroma cacao HOM05D000211 ORTHO05D002682 3.0e-106 389.4 312 66.7
Aqoxy6G00336 Aquilegia oxysepala HOM05D000211 ORTHO05D002682 4.8e-104 382.1 313 64.2
vmacro04275 Vaccinium macrocarpon HOM05D000211 ORTHO05D002682 8.2e-104 381.3 317 65.9
Nn4g24948 Nelumbo nucifera HOM05D000211 ORTHO05D002682 6.9e-103 378.3 308 62.0
Gorai.004G020200 Gossypium raimondii HOM05D000211 ORTHO05D002682 9.1e-103 377.9 308 69.5
Gohir.D08G024800 Gossypium hirsutum HOM05D000211 ORTHO05D002682 3.4e-102 375.9 308 69.2
AUR62022805 Chenopodium quinoa HOM05D000211 ORTHO05D002682 7.7e-102 374.8 311 65.9
Hund16025 Selenicereus undatus HOM05D000211 ORTHO05D002682 7.7e-102 374.8 304 65.8
AUR62012168 Chenopodium quinoa HOM05D000211 ORTHO05D002682 1.3e-101 374.0 311 65.6
Gohir.A08G014300 Gossypium hirsutum HOM05D000211 ORTHO05D002682 1.3e-101 374.0 308 68.8
Manes.17G052400 Manihot esculenta HOM05D000211 ORTHO05D002682 1.7e-101 373.6 317 61.2
Duzib150G0667 Durio zibethinus HOM05D000211 ORTHO05D002682 1.4e-100 370.5 312 66.7
SalBow3G3948 Salvia bowleyana HOM05D000211 ORTHO05D002682 5.5e-100 368.6 310 65.5
Dinv03796 Davidia involucrata HOM05D000211 ORTHO05D002682 9.4e-100 367.9 307 61.9
Peaxi162Scf00745g00321 Petunia axillaris HOM05D000211 ORTHO05D002682 1.0e-98 364.4 307 60.9
MBI13_g37424_MAGBIO Magnolia biondii HOM05D000211 ORTHO05D002682 5.1e-98 362.1 330 62.7
Ah.16g102820 Amaranthus hybridus HOM05D000211 ORTHO05D002682 1.5e-97 360.5 306 65.7
Eucgr.B03587 Eucalyptus grandis HOM05D000211 ORTHO05D002682 5.7e-97 358.6 330 57.3
Sabra03G0165900 Salix brachista HOM05D000211 ORTHO05D002682 9.7e-97 357.8 309 63.8
Cc01_g00300 Coffea canephora HOM05D000211 ORTHO05D002682 2.2e-96 356.7 311 65.9
MELO3C014731.2 Cucumis melo HOM05D000211 ORTHO05D002682 2.2e-96 356.7 316 60.8
PGR119G2498 Punica granatum HOM05D000211 ORTHO05D002682 2.2e-96 356.7 312 59.6
Sed0010489 Sechium edule HOM05D000211 ORTHO05D002682 4.8e-96 355.5 301 65.8
Gorai.013G245500 Gossypium raimondii HOM05D000211 ORTHO05D002682 1.4e-95 354.0 312 60.9
PSO384G4567 Papaver somniferum HOM05D000211 ORTHO05D002682 1.4e-95 354.0 306 64.4
TWI60G0518 Tripterygium wilfordii HOM05D000211 ORTHO05D002682 1.4e-95 354.0 306 64.7
Atru.chr3.2061 Acer truncatum HOM05D000211 ORTHO05D002682 3.1e-95 352.8 318 59.7
Gohir.D13G215200 Gossypium hirsutum HOM05D000211 ORTHO05D002682 4.1e-95 352.4 312 59.0
CsaV3_4G017580 Cucumis sativus L. HOM05D000211 ORTHO05D002682 6.9e-95 351.7 312 60.6
Ciclev10014526m.g Citrus clementina HOM05D000211 ORTHO05D002682 9.1e-95 351.3 317 63.1
Prupe.6G001700 Prunus persica HOM05D000211 ORTHO05D002682 1.5e-94 350.5 310 61.0
CDE04G2707 Ceratophyllum demersum HOM05D000211 ORTHO05D002682 2.6e-94 349.7 371 51.5
Gohir.A13G211300 Gossypium hirsutum HOM05D000211 ORTHO05D002682 4.5e-94 349.0 309 58.6
Eucgr.J01751 Eucalyptus grandis HOM05D000211 ORTHO05D002682 5.9e-94 348.6 317 59.0
PGSC0003DMG400004640 Solanum tuberosum HOM05D000211 ORTHO05D002682 5.9e-94 348.6 317 57.7
MSTRG.12804 Avicennia marina HOM05D000211 ORTHO05D002682 2.9e-93 346.3 311 63.3
Manes.16G035100 Manihot esculenta HOM05D000211 ORTHO05D002682 8.5e-93 344.7 311 63.0
THA.LOC104811714 Tarenaya hassleriana HOM05D000211 ORTHO05D002682 1.9e-92 343.6 310 62.9
Sopen12g034320 Solanum pennellii HOM05D000211 ORTHO05D002682 3.2e-92 342.8 321 59.2
Potri.003G223000 Populus trichocarpa HOM05D000211 ORTHO05D002682 7.2e-92 341.7 309 63.4
PGR102G3379 Punica granatum HOM05D000211 ORTHO05D002682 9.4e-92 341.3 315 62.9
Nn3g18641 Nelumbo nucifera HOM05D000211 ORTHO05D002682 1.6e-91 340.5 308 62.7
SGA_v2.0_scaffold6G03328 Striga asiatica HOM05D000211 ORTHO05D002682 6.1e-91 338.6 311 59.8
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 6.1e-91 338.6 309 56.0
Solyc12g099660.2 Solanum lycopersicum HOM05D000211 ORTHO05D002682 7.9e-91 338.2 324 55.9
C09p47860 Brassica napus HOM05D000211 ORTHO05D002682 1.4e-90 337.4 314 58.6
Nitab4.5_0004741g0050 Nicotiana tabacum HOM05D000211 ORTHO05D002682 2.3e-90 336.7 336 57.4
AL8G32010 Arabidopsis lyrata HOM05D000211 ORTHO05D002682 5.2e-90 335.5 311 58.8
Zm00001eb332690 Zea mays HOM05D000211 ORTHO05D002682 5.2e-90 335.5 324 59.6
Thhalv10012928m.g Eutrema salsugineum HOM05D000211 ORTHO05D002682 6.7e-90 335.1 312 57.4
Oeu060906.1 Olea europaea HOM05D000211 ORTHO05D002682 8.8e-90 334.7 312 59.6
HPP92_014369 Vanilla planifolia HOM05D000211 ORTHO05D002682 8.8e-90 334.7 304 59.2
BraA03t10657Z Brassica rapa HOM05D000211 ORTHO05D002682 2.0e-89 333.6 311 57.2
Sc06g0004170 Simmondsia chinensis HOM05D000211 ORTHO05D002682 2.0e-89 333.6 304 60.5
BcaB01g04396 Brassica carinata HOM05D000211 ORTHO05D002682 3.3e-89 332.8 311 57.6
BolC9t57624H Brassica oleracea HOM05D000211 ORTHO05D002682 3.3e-89 332.8 307 59.3
Carub.0008s1671 Capsella rubella HOM05D000211 ORTHO05D002682 3.3e-89 332.8 311 58.8
Sp6g18190 Schrenkiella parvula HOM05D000211 ORTHO05D002682 3.3e-89 332.8 315 56.8
FAN21G3711 Fragaria x ananassa HOM05D000211 ORTHO05D002682 1.7e-88 330.5 310 57.7
C03p15800 Brassica napus HOM05D000211 ORTHO05D002682 2.2e-88 330.1 311 57.6
BolC3t14011H Brassica oleracea HOM05D000211 ORTHO05D002682 2.8e-88 329.7 311 57.6
ECA238G0311 Erigeron canadensis HOM05D000211 ORTHO05D002682 6.3e-88 328.6 308 57.8
Aa31LG3G12270 Aethionema arabicum HOM05D000211 ORTHO05D002682 1.4e-87 327.4 318 60.4
AT5G56360 Arabidopsis thaliana HOM05D000211 ORTHO05D002682 1.4e-87 327.4 300 59.7
CARHR269800 Cardamine hirsuta HOM05D000211 ORTHO05D002682 1.4e-87 327.4 300 59.0
BcaC01g06420 Brassica carinata HOM05D000211 ORTHO05D002682 3.1e-87 326.2 311 60.8
CAN.G484.26 Capsicum annuum HOM05D000211 ORTHO05D002682 1.6e-86 323.9 313 56.9
Oeu023969.1 Olea europaea HOM05D000211 ORTHO05D002682 2.0e-86 323.6 286 61.9
TAR633G1501 Trochodendron aralioides HOM05D000211 ORTHO05D002682 4.5e-86 322.4 268 66.8
Os01g0276800 Oryza sativa ssp. japonica HOM05D000211 ORTHO05D002682 5.9e-86 322.0 325 53.2
Peaxi162Scf00086g00328 Petunia axillaris HOM05D000211 ORTHO05D002682 5.9e-86 322.0 328 53.7
unitig_52.g17523 Utricularia gibba HOM05D000211 ORTHO05D002682 1.3e-85 320.9 308 55.2
DCAR_023822 Daucus carota HOM05D000211 ORTHO05D002682 8.5e-85 318.2 308 56.8
SGA_v2.0_scaffold3G01698 Striga asiatica HOM05D000211 ORTHO05D002682 8.5e-85 318.2 323 55.4
HanXRQChr07g0186541 Helianthus annuus HOM05D000211 ORTHO05D002682 9.4e-84 314.7 307 55.4
A03p13510 Brassica napus HOM05D000211 ORTHO05D002682 1.6e-83 313.9 311 58.8
THA.LOC104813476 Tarenaya hassleriana HOM05D000211 ORTHO05D002682 2.7e-83 313.2 283 60.8
A10p13680 Brassica napus HOM05D000211 ORTHO05D002682 1.0e-82 311.2 312 59.3
BraA10t43467Z Brassica rapa HOM05D000211 ORTHO05D002682 1.0e-82 311.2 312 59.3
HanXRQChr14g0437141 Helianthus annuus HOM05D000211 ORTHO05D002682 5.7e-81 305.4 296 53.4
Migut.N00534 Erythranthe guttata HOM05D000211 ORTHO05D002682 7.5e-81 305.1 310 54.2
Nitab4.5_0004438g0080 Nicotiana tabacum HOM05D000211 ORTHO05D002682 1.1e-79 301.2 272 57.4
TAR636G1134 Trochodendron aralioides HOM05D000211 ORTHO05D002682 1.1e-79 301.2 251 66.1
Zm00001eb128910 Zea mays HOM05D000211 ORTHO05D002682 4.1e-79 299.3 303 58.7
MBI19_g09314_MAGBIO Magnolia biondii HOM05D000211 ORTHO05D002682 1.2e-78 297.7 307 53.1
Thecc.05G254600 Theobroma cacao HOM05D000211 ORTHO05D002682 1.2e-78 297.7 314 51.9
ATR0068G094 Amborella trichopoda HOM05D003450 ORTHO05D004150 2.0e-78 297.0 290 55.9
Nitab4.5_0000570g0080 Nicotiana tabacum HOM05D000211 ORTHO05D002682 3.2e-76 289.7 328 51.8
BcaC04g20099 Brassica carinata HOM05D000211 ORTHO05D002682 2.1e-75 287.0 314 53.2
CDE02G3536 Ceratophyllum demersum HOM05D000211 ORTHO05D002682 2.1e-75 287.0 306 51.0
Gohir.A13G101215 Gossypium hirsutum HOM05D000211 ORTHO05D002682 2.7e-75 286.6 309 47.6
Duzib106G1428 Durio zibethinus HOM05D000211 ORTHO05D002682 8.8e-74 281.6 320 53.1
CSS0039902 Camellia sinensis var. sinensis HOM05D000211 ORTHO05D002682 9.8e-73 278.1 308 56.2
COL.COLO4_36028 Corchorus olitorius HOM05D000211 ORTHO05D002682 4.1e-71 272.7 338 45.0
Rhsim13G0234500 Rhododendron simsii HOM05D000211 ORTHO05D002682 9.5e-68 261.5 368 48.9
Sabra13G0053500 Salix brachista HOM05D000211 ORTHO05D002682 9.5e-68 261.5 296 47.6
Lsat_1_v5_gn_6_56060 Lactuca sativa HOM05D000211 ORTHO05D002682 1.4e-66 257.7 269 50.2
ECA233G3904 Erigeron canadensis HOM05D000211 ORTHO05D002682 1.3e-64 251.1 308 51.0
Potri.013G060332 Populus trichocarpa HOM05D000211 ORTHO05D002682 3.7e-64 249.6 188 61.7
SEGI_17374 Sequoiadendron giganteum HOM05D000211 ORTHO05D002682 2.1e-59 233.8 320 48.1
Pp3c22_18260 Physcomitrium patens HOM05D000211 ORTHO05D002682 1.0e-58 231.5 300 45.3
Nitab4.5_0002741g0040 Nicotiana tabacum HOM05D000211 ORTHO05D002682 1.4e-58 231.1 312 47.8
Lsat_1_v5_gn_2_50861 Lactuca sativa HOM05D000211 ORTHO05D002682 6.8e-58 228.8 248 53.6
Mapoly0057s0106 Marchantia polymorpha HOM05D000211 ORTHO05D002682 5.4e-55 219.2 306 44.1
Peaxi162Scf00004g02724 Petunia axillaris HOM05D000211 ORTHO05D002682 7.8e-54 215.3 309 42.7
SMO133G0027 Selaginella moellendorffii HOM05D000211 ORTHO05D002682 3.6e-51 206.5 167 59.3
Cpa.g.sc119.26 Carica papaya HOM05D000211 ORTHO05D002682 4.4e-49 199.5 115 78.3
AagrBONN_evm.TU.Sc2ySwM_344.2520 Anthoceros agrestis HOM05D000211 ORTHO05D002682 9.8e-49 198.4 307 40.1
Potri.001G001700 Populus trichocarpa HOM05D000211 ORTHO05D002682 2.1e-43 180.6 200 55.0
Gorai.013G117500 Gossypium raimondii HOM05D000211 ORTHO05D002682 3.9e-37 159.8 221 40.7
Gohir.D13G104718 Gossypium hirsutum HOM05D000211 ORTHO05D002682 1.1e-36 158.3 221 41.6
Lj6A294G9 Lonicera japonica HOM05D000211 ORTHO05D002682 3.6e-35 153.3 198 51.5
Lsat_1_v5_gn_4_29281 Lactuca sativa HOM05D000211 ORTHO05D002682 2.1e-27 127.5 73 72.6
Hund13814 Selenicereus undatus HOM05D000211 ORTHO05D002682 6.2e-27 125.9 248 36.7
Cre17.g725350 Chlamydomonas reinhardtii HOM05D000211 ORTHO05D002682 1.1e-23 115.2 134 40.3
CBR_g20370 Chara braunii HOM05D000019 ORTHO05D000353 1.3e-21 108.2 373 28.2
MCO06G050 Micromonas commoda HOM05D000211 ORTHO05D002682 1.9e-20 104.4 166 36.1
PRCOL_00001420 Prasinoderma coloniale HOM05D000211 ORTHO05D002682 5.1e-13 79.7 321 25.5
SMO081G0002 Selaginella moellendorffii HOM05D000211 ORTHO05D002682 9.6e-12 75.5 72 48.6
Actinidia00915 Actinidia chinensis HOM05D000211 ORTHO05D002682 2.8e-11 73.9 145 40.7
PRCOL_00005414 Prasinoderma coloniale HOM05D000211 ORTHO05D002682 2.8e-11 73.9 146 32.9
Cfa026088 Carpinus fangiana HOM05D000211 ORTHO05D002682 3.1e-10 70.5 309 26.2
Lsat_1_v5_gn_4_87481 Lactuca sativa HOM05D000211 ORTHO05D002682 4.9e-08 63.2 68 47.1


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