Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 9.9e-50 199.9 107 100.0
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 1.5e-37 159.5 107 81.3
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 1.9e-37 159.1 107 76.6
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 1.8e-35 152.5 107 75.7
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 9.0e-35 150.2 107 74.8
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 1.5e-34 149.4 107 73.8
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 2.0e-34 149.1 107 72.9
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 9.9e-34 146.7 107 71.0
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 2.2e-33 145.6 105 70.5
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 9.3e-32 140.2 103 70.9
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 9.3e-32 140.2 103 70.9
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 3.5e-31 138.3 105 72.4
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 4.6e-31 137.9 107 71.0
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 1.3e-30 136.3 107 72.0
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 1.7e-30 136.0 105 70.5
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 1.7e-30 136.0 105 68.6
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 2.3e-30 135.6 105 71.4
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 3.0e-30 135.2 100 73.0
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 3.9e-30 134.8 105 70.5
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 5.1e-30 134.4 107 70.1
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 6.6e-30 134.0 102 72.5
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 1.5e-29 132.9 100 72.0
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.5e-29 132.9 100 72.0
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.9e-29 132.5 100 72.0
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 1.9e-29 132.5 102 71.6
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 2.5e-29 132.1 105 68.6
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 5.6e-29 131.0 103 67.0
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 9.6e-29 130.2 103 68.9
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.3e-28 129.8 100 71.0
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 1.6e-28 129.4 107 65.4
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 1.6e-28 129.4 107 65.4
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 1.6e-28 129.4 99 72.7
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 2.8e-28 128.6 105 63.8
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 2.8e-28 128.6 105 64.8
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 3.6e-28 128.3 103 67.0
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 4.8e-28 127.9 104 67.3
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 4.8e-28 127.9 103 67.0
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 4.8e-28 127.9 102 69.6
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 8.1e-28 127.1 104 66.3
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 8.1e-28 127.1 102 68.6
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 1.1e-27 126.7 107 64.5
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 1.1e-27 126.7 104 65.4
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 1.1e-27 126.7 105 65.7
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 1.1e-27 126.7 105 66.7
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 1.8e-27 125.9 105 63.8
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 1.8e-27 125.9 107 63.6
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 1.8e-27 125.9 103 66.0
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 1.8e-27 125.9 105 67.6
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 2.4e-27 125.6 105 65.7
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 4.0e-27 124.8 103 65.0
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 4.0e-27 124.8 101 68.3
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 5.3e-27 124.4 103 65.0
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 5.3e-27 124.4 103 65.0
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 6.9e-27 124.0 105 64.8
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 6.9e-27 124.0 101 66.3
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 6.9e-27 124.0 103 65.0
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 9.0e-27 123.6 103 67.0
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 9.0e-27 123.6 103 64.1
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 2.0e-26 122.5 99 66.7
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 3.4e-26 121.7 102 63.7
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 3.4e-26 121.7 103 63.1
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 3.4e-26 121.7 103 64.1
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 4.5e-26 121.3 101 64.4
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 7.6e-26 120.6 101 65.3
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 7.6e-26 120.6 101 64.4
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 7.6e-26 120.6 101 64.4
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 9.9e-26 120.2 102 63.7
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 1.3e-25 119.8 100 65.0
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 1.7e-25 119.4 95 67.4
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 2.2e-25 119.0 104 60.6
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 2.2e-25 119.0 104 62.5
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 2.2e-25 119.0 103 62.1
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 2.2e-25 119.0 101 64.4
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 4.9e-25 117.9 101 63.4
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 4.9e-25 117.9 103 60.2
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 6.4e-25 117.5 104 60.6
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 6.4e-25 117.5 100 63.0
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 6.4e-25 117.5 104 59.6
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 1.1e-24 116.7 104 57.7
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 1.4e-24 116.3 104 59.6
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 1.4e-24 116.3 104 59.6
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 1.4e-24 116.3 104 59.6
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 1.4e-24 116.3 104 59.6
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 1.9e-24 115.9 103 59.2
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 2.4e-24 115.5 104 59.6
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 3.2e-24 115.2 103 60.2
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 4.2e-24 114.8 101 61.4
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 5.4e-24 114.4 103 60.2
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 5.4e-24 114.4 119 58.0
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 9.3e-24 113.6 103 59.2
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 2.1e-23 112.5 103 59.2
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 4.6e-23 111.3 104 57.7
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 6.0e-23 110.9 104 57.7
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 6.0e-23 110.9 86 69.8
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 1.3e-22 109.8 102 58.8
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 8.7e-22 107.1 103 58.3
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 8.7e-22 107.1 101 57.4
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 2.5e-21 105.5 101 56.4
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 9.6e-21 103.6 99 57.6
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 1.6e-20 102.8 103 56.3
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 2.8e-20 102.1 156 46.8
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 4.8e-20 101.3 101 56.4
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 1.1e-19 100.1 75 73.3
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 1.8e-19 99.4 75 72.0
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 1.5e-18 96.3 72 72.2
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 4.5e-18 94.7 99 52.5
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 4.5e-18 94.7 101 52.5
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 2.9e-17 92.0 76 65.8
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 2.9e-17 92.0 75 64.0
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 3.8e-17 91.7 99 51.5
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 8.4e-17 90.5 82 62.2
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 1.1e-16 90.1 74 66.2
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.4e-16 89.7 85 60.0
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 3.2e-16 88.6 69 68.1
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 2.7e-15 85.5 176 35.8
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 3.0e-14 82.0 76 55.3
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 1.3e-12 76.6 79 59.5
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 1.6e-12 76.3 92 45.7
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 1.1e-11 73.6 75 56.0
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 4.0e-11 71.6 93 43.0
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 5.8e-10 67.8 50 72.0
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 1.0e-09 67.0 95 41.1
PSO832G3862 Papaver somniferum HOM05D001297 ORTHO05D001135 7.9e-07 57.4 88 38.6
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 6.7e-06 54.3 50 52.0


User provided reference genes

Program Settings