Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33996 Trifolium pratense HOM05D007613 ORTHO05D009344 4.0e-69 264.6 130 100.0
Psat6g165400 Pisum sativum HOM05D007613 ORTHO05D009344 2.7e-65 251.9 130 93.8
Medtr1g088460 Medicago truncatula HOM05D007613 ORTHO05D009344 3.1e-58 228.4 130 86.2
VMungo0720G1265 Vigna mungo HOM05D007613 ORTHO05D009344 1.6e-54 216.1 129 80.6
Phvul.007G146700 Phaseolus vulgaris HOM05D007613 ORTHO05D009344 2.8e-54 215.3 129 79.8
Ca_10334_v3 Cicer arietinum L. HOM05D007613 ORTHO05D009344 6.1e-54 214.2 130 83.1
Lj5g0017580 Lotus japonicus HOM05D007613 ORTHO05D009344 2.8e-51 205.3 131 77.1
QL12p028448 Quercus lobata HOM05D007613 ORTHO05D009344 3.7e-51 204.9 129 74.4
Eucgr.H01109 Eucalyptus grandis HOM05D007613 ORTHO05D009344 8.3e-51 203.8 129 75.2
CiPaw.07G109200 Carya illinoinensis HOM05D007613 ORTHO05D009344 1.4e-50 203.0 129 74.4
Manes.01G219200 Manihot esculenta HOM05D007613 ORTHO05D009344 1.3e-48 196.4 129 72.9
Potri.014G128900 Populus trichocarpa HOM05D007613 ORTHO05D009344 5.0e-48 194.5 129 72.9
MELO3C016000.2 Cucumis melo HOM05D007613 ORTHO05D009344 6.6e-48 194.1 129 69.8
TAR636G2501 Trochodendron aralioides HOM05D007613 ORTHO05D009344 8.6e-48 193.7 129 71.3
Ciclev10022836m.g Citrus clementina HOM05D007613 ORTHO05D009344 1.9e-47 192.6 129 70.5
CsaV3_7G029280 Cucumis sativus L. HOM05D007613 ORTHO05D009344 1.9e-47 192.6 129 69.0
arahy.Tifrunner.gnm1.ann1.7MAL8N Arachis hypogaea HOM05D007613 ORTHO05D009344 5.6e-47 191.0 129 69.8
Glyma.10G018300 Glycine max HOM05D007613 ORTHO05D009344 5.6e-47 191.0 131 72.5
arahy.Tifrunner.gnm1.ann1.BW40YJ Arachis hypogaea HOM05D007613 ORTHO05D009344 9.5e-47 190.3 129 69.8
Duzib133G0913 Durio zibethinus HOM05D007613 ORTHO05D009344 4.7e-46 188.0 129 69.0
Actinidia24821 Actinidia chinensis HOM05D007613 ORTHO05D009344 2.3e-45 185.7 129 69.8
Lalb_Chr06g0166471 Lupinus albus HOM05D007613 ORTHO05D009344 5.2e-45 184.5 128 67.2
PGR119G2478 Punica granatum HOM05D007613 ORTHO05D009344 8.9e-45 183.7 127 70.1
GSVIVG01028017001 Vitis vinifera HOM05D007613 ORTHO05D009344 5.8e-44 181.0 126 72.2
AT3G62880 Arabidopsis thaliana HOM05D007613 ORTHO05D009344 4.6e-41 171.4 129 63.6
vmacro15014 Vaccinium macrocarpon HOM05D007613 ORTHO05D009344 7.8e-41 170.6 134 60.4
Lalb_Chr02g0146351 Lupinus albus HOM05D007613 ORTHO05D009344 1.0e-40 170.2 129 62.0
MD03G1288400 Malus domestica HOM05D007613 ORTHO05D009344 1.0e-40 170.2 128 63.3
AL5G45650 Arabidopsis lyrata HOM05D007613 ORTHO05D009344 1.7e-40 169.5 129 62.0
Prupe.8G261600 Prunus persica HOM05D007613 ORTHO05D009344 2.3e-40 169.1 129 64.3
Thecc.01G300700 Theobroma cacao HOM05D007613 ORTHO05D009344 3.0e-40 168.7 109 71.6
Aa31LG10G16510 Aethionema arabicum HOM05D007613 ORTHO05D009344 5.0e-40 167.9 129 61.2
Cpa.g.sc9.260 Carica papaya HOM05D000286 ORTHO05D000170 5.0e-40 167.9 116 68.1
Atru.chr5.1146 Acer truncatum HOM05D007613 ORTHO05D009344 4.3e-39 164.9 126 61.9
Gohir.D12G134100 Gossypium hirsutum HOM05D007613 ORTHO05D009344 5.6e-39 164.5 126 64.3
Gorai.008G145100 Gossypium raimondii HOM05D007613 ORTHO05D009344 5.6e-39 164.5 126 64.3
THA.LOC104798831 Tarenaya hassleriana HOM05D007613 ORTHO05D009344 5.6e-39 164.5 129 63.6
EL10Ac7g17473 Beta vulgaris HOM05D007613 ORTHO05D009344 1.6e-38 162.9 129 61.2
HanXRQChr13g0413041 Helianthus annuus HOM05D007613 ORTHO05D009344 2.1e-38 162.5 120 60.8
Lsat_1_v5_gn_5_191040 Lactuca sativa HOM05D007613 ORTHO05D009344 2.1e-38 162.5 119 62.2
Thhalv10006304m.g Eutrema salsugineum HOM05D007613 ORTHO05D009344 2.8e-38 162.2 129 59.7
CARHR173140 Cardamine hirsuta HOM05D007613 ORTHO05D009344 1.1e-37 160.2 129 58.9
ECA248G1192 Erigeron canadensis HOM05D007613 ORTHO05D009344 1.4e-37 159.8 127 59.1
Peaxi162Scf00140g01222 Petunia axillaris HOM05D007613 ORTHO05D009344 1.4e-37 159.8 128 60.2
Sp5g00640 Schrenkiella parvula HOM05D007613 ORTHO05D009344 1.8e-37 159.5 129 57.4
MSTRG.18147 Avicennia marina HOM05D007613 ORTHO05D009344 2.3e-37 159.1 129 56.6
Solyc06g084550.3 Solanum lycopersicum HOM05D007613 ORTHO05D009344 2.3e-37 159.1 128 59.4
Sopen06g035930 Solanum pennellii HOM05D007613 ORTHO05D009344 3.1e-37 158.7 128 59.4
Nitab4.5_0019054g0010 Nicotiana tabacum HOM05D007613 ORTHO05D009344 2.0e-36 156.0 128 59.4
BraA04t15767Z Brassica rapa HOM05D007613 ORTHO05D009344 2.6e-36 155.6 129 55.0
BcaB02g08092 Brassica carinata HOM05D007613 ORTHO05D009344 4.4e-36 154.8 129 55.0
Nitab4.5_0002820g0060 Nicotiana tabacum HOM05D007613 ORTHO05D009344 4.4e-36 154.8 128 59.4
TWI59G0030 Tripterygium wilfordii HOM05D007613 ORTHO05D009344 3.7e-35 151.8 129 53.5
CAN.G1209.25 Capsicum annuum HOM05D007613 ORTHO05D009344 4.9e-35 151.4 128 57.0
RcHm_v2.0_Chr6g0294031 Rosa chinensis HOM05D007613 ORTHO05D009344 4.9e-35 151.4 128 58.6
DCAR_018332 Daucus carota HOM05D007613 ORTHO05D009344 6.4e-35 151.0 126 54.8
C04p30380 Brassica napus HOM05D007613 ORTHO05D009344 2.4e-34 149.1 129 54.3
BolC4t24569H Brassica oleracea HOM05D007613 ORTHO05D009344 2.4e-34 149.1 129 54.3
PSO170G2016 Papaver somniferum HOM05D007613 ORTHO05D009344 1.6e-33 146.4 128 55.5
Ah.08g213430 Amaranthus hybridus HOM05D000286 ORTHO05D000170 4.6e-33 144.8 126 54.8
Hma1.2p1_0491F.1_g164570 Hydrangea macrophylla HOM05D007613 ORTHO05D009344 4.6e-33 144.8 130 54.6
CDE08G0198 Ceratophyllum demersum HOM05D007613 ORTHO05D009344 7.8e-33 144.1 125 56.0
ClCG09G005860 Citrullus lanatus HOM05D007613 ORTHO05D009344 1.5e-31 139.8 137 55.5
Migut.D00222 Erythranthe guttata HOM05D007613 ORTHO05D009344 3.3e-31 138.7 127 52.8
Oeu048336.2 Olea europaea HOM05D007613 ORTHO05D009344 3.3e-31 138.7 129 51.2
Cc01_g20860 Coffea canephora HOM05D007613 ORTHO05D009344 1.6e-30 136.3 125 53.6
Sed0015913 Sechium edule HOM05D007613 ORTHO05D009344 4.0e-29 131.7 97 59.8
Nn3g21498 Nelumbo nucifera HOM05D007613 ORTHO05D009344 2.0e-28 129.4 86 65.1
A04p00480 Brassica napus HOM05D007613 ORTHO05D009344 9.9e-28 127.1 105 52.4
Sabra14G0095700 Salix brachista HOM05D007613 ORTHO05D009344 2.2e-27 125.9 129 56.6
FvH4_2g25740 Fragaria vesca HOM05D007613 ORTHO05D009344 2.9e-27 125.6 127 48.8
CSS0026666 Camellia sinensis var. sinensis HOM05D007613 ORTHO05D009344 3.7e-27 125.2 78 71.8
COL.COLO4_23344 Corchorus olitorius HOM05D007613 ORTHO05D009344 4.9e-27 124.8 90 62.2
Haze_04939 Corylus avellana HOM05D007613 ORTHO05D009344 1.4e-26 123.2 103 57.3
FAN20G1450 Fragaria x ananassa HOM05D007613 ORTHO05D009344 1.3e-24 116.7 147 44.2
PGSC0003DMG400024046 Solanum tuberosum HOM05D007613 ORTHO05D009344 1.3e-24 116.7 151 43.0
Rhsim01G0285300 Rhododendron simsii HOM05D007613 ORTHO05D009344 5.1e-24 114.8 101 53.5
Migut.B01150 Erythranthe guttata HOM05D007613 ORTHO05D009344 3.3e-23 112.1 108 50.0
Aqoxy2G02939 Aquilegia oxysepala HOM05D007613 ORTHO05D009344 7.3e-23 110.9 118 43.2
ATR0706G141 Amborella trichopoda HOM05D007613 ORTHO05D009344 2.6e-20 102.4 119 40.3
Cfa005911 Carpinus fangiana HOM05D007613 ORTHO05D009344 1.3e-19 100.1 132 50.8
HanXRQChr13g0413071 Helianthus annuus HOM05D007613 ORTHO05D009344 1.7e-19 99.8 69 62.3
FAN27G2766 Fragaria x ananassa HOM05D007613 ORTHO05D009344 6.4e-19 97.8 87 55.2
BcaC02g10319 Brassica carinata HOM05D007613 ORTHO05D009344 2.1e-17 92.8 77 54.5
Gohir.A12G130300 Gossypium hirsutum HOM05D007613 ORTHO05D009344 1.0e-16 90.5 126 43.7
AUR62008666 Chenopodium quinoa HOM05D007613 ORTHO05D009344 1.7e-16 89.7 77 55.8
Pp3c19_22480 Physcomitrium patens HOM05D007613 ORTHO05D009344 2.3e-16 89.4 119 37.8
SMO347G0100 Selaginella moellendorffii HOM05D007613 ORTHO05D009344 2.3e-16 89.4 119 37.8
MD11G1309700 Malus domestica HOM05D007613 ORTHO05D009344 3.9e-16 88.6 65 60.0
Hund18170 Selenicereus undatus HOM05D007613 ORTHO05D009344 4.3e-15 85.1 68 57.4
Actinidia21047 Actinidia chinensis HOM05D007613 ORTHO05D009344 5.6e-15 84.7 57 70.2
Mapoly0048s0107 Marchantia polymorpha HOM05D007613 ORTHO05D009344 4.0e-13 78.6 95 43.2
SGA_v2.0_scaffold1G00364 Striga asiatica HOM05D001636 ORTHO05D003817 4.0e-13 78.6 70 52.9
SalBow3G3757 Salvia bowleyana HOM05D007613 ORTHO05D009344 2.9e-11 72.4 63 50.8
AUR62033103 Chenopodium quinoa HOM05D007613 ORTHO05D009344 4.9e-11 71.6 129 34.9
SHI15147 Sapria himalayana HOM05D007613 ORTHO05D009344 1.4e-10 70.1 63 50.8
Carub.0005s2952 Capsella rubella HOM05D001675 ORTHO05D001808 9.3e-10 67.4 47 61.7
FAN15G1907 Fragaria x ananassa HOM05D007613 ORTHO05D009344 9.3e-10 67.4 87 39.1
FAN24G3183 Fragaria x ananassa HOM05D007613 ORTHO05D009344 1.2e-09 67.0 64 43.8
Dinv33054 Davidia involucrata HOM05D000286 ORTHO05D000170 3.3e-07 58.9 36 83.3
Glyma.02G017851 Glycine max HOM05D007613 ORTHO05D009344 9.6e-07 57.4 48 66.7
FAN16G0236 Fragaria x ananassa HOM05D002174 ORTHO05D005941 6.2e-06 54.7 97 33.0


User provided reference genes

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