Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 2.6e-59 231.9 121 100.0
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 5.0e-58 227.6 121 98.3
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 2.1e-56 222.2 121 95.0
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 2.7e-56 221.9 121 95.0
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 2.3e-55 218.8 121 94.2
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 8.2e-53 210.3 121 90.9
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 3.5e-51 204.9 121 88.4
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 1.3e-50 203.0 121 87.6
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 5.0e-50 201.1 115 91.3
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 1.5e-49 199.5 117 88.9
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 1.5e-49 199.5 115 90.4
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 5.2e-47 191.0 112 88.4
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 2.6e-46 188.7 115 79.1
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 5.7e-46 187.6 114 85.1
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 5.7e-46 187.6 115 78.3
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 2.8e-45 185.3 121 76.0
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 3.7e-45 184.9 117 81.2
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 6.3e-45 184.1 121 75.2
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 8.3e-45 183.7 114 87.7
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 5.4e-44 181.0 121 76.0
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 5.4e-44 181.0 104 91.3
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 9.1e-44 180.3 121 72.7
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 2.7e-43 178.7 121 72.7
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 2.7e-43 178.7 121 71.9
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 2.2e-42 175.6 121 71.1
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 2.2e-42 175.6 121 73.6
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 2.9e-42 175.3 117 76.9
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 3.8e-42 174.9 104 88.5
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 5.0e-42 174.5 115 76.5
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 8.5e-42 173.7 114 76.3
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 1.1e-41 173.3 121 72.7
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 1.1e-41 173.3 121 71.9
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.5e-41 172.9 121 69.4
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.5e-41 172.9 123 72.4
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 2.5e-41 172.2 121 71.1
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 3.2e-41 171.8 117 75.2
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 3.2e-41 171.8 121 71.1
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 5.5e-41 171.0 121 71.1
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 5.5e-41 171.0 121 71.1
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 5.5e-41 171.0 115 74.8
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 7.2e-41 170.6 121 67.8
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 7.2e-41 170.6 113 74.3
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 7.2e-41 170.6 121 71.9
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 1.2e-40 169.9 121 70.2
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 1.2e-40 169.9 121 71.1
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 1.2e-40 169.9 121 67.8
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 1.2e-40 169.9 114 71.9
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 1.6e-40 169.5 121 69.4
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 1.6e-40 169.5 122 70.5
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 1.6e-40 169.5 121 75.2
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 6.1e-40 167.5 114 70.2
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 8.0e-40 167.2 112 75.9
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 1.0e-39 166.8 121 68.6
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 1.0e-39 166.8 114 71.9
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 1.0e-39 166.8 121 68.6
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 1.0e-39 166.8 112 75.0
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 5.2e-39 164.5 121 66.1
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 6.8e-39 164.1 121 70.2
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 8.8e-39 163.7 121 67.8
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 1.2e-38 163.3 117 70.9
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 2.0e-38 162.5 114 71.9
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 2.6e-38 162.2 112 74.1
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 3.4e-38 161.8 121 66.9
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 3.4e-38 161.8 99 78.8
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 5.7e-38 161.0 115 70.4
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 7.5e-38 160.6 114 70.2
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 7.5e-38 160.6 121 68.6
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 2.8e-37 158.7 113 69.9
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 3.7e-37 158.3 114 70.2
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 4.9e-37 157.9 114 69.3
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 4.9e-37 157.9 114 68.4
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 6.3e-37 157.5 114 69.3
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 6.3e-37 157.5 114 70.2
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 8.3e-37 157.1 146 58.9
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 1.1e-36 156.8 112 72.3
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 1.1e-36 156.8 121 66.1
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 1.1e-36 156.8 109 67.0
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 1.4e-36 156.4 114 69.3
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 1.8e-36 156.0 114 69.3
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 2.4e-36 155.6 117 68.4
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 2.4e-36 155.6 117 68.4
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 2.4e-36 155.6 117 68.4
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 2.4e-36 155.6 121 65.3
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 3.1e-36 155.2 114 69.3
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 4.1e-36 154.8 114 68.4
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 4.1e-36 154.8 100 76.0
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 9.2e-36 153.7 121 67.8
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 1.6e-35 152.9 115 69.6
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 1.6e-35 152.9 111 66.7
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 2.0e-35 152.5 112 67.9
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 2.0e-35 152.5 111 66.7
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 3.5e-35 151.8 104 73.1
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 3.5e-35 151.8 108 71.3
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 5.9e-35 151.0 108 71.3
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 5.9e-35 151.0 114 64.9
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 7.8e-35 150.6 104 73.1
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 1.0e-34 150.2 108 68.5
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 1.9e-33 146.0 89 77.5
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 1.9e-33 146.0 103 68.9
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 1.9e-33 146.0 96 74.0
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 2.5e-33 145.6 107 68.2
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 3.3e-33 145.2 89 78.7
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 9.5e-33 143.7 104 70.2
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 1.2e-32 143.3 103 69.9
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 3.6e-32 141.7 98 73.5
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 4.7e-32 141.4 112 64.3
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 4.7e-32 141.4 104 67.3
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 6.1e-32 141.0 103 64.1
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 8.0e-32 140.6 100 73.0
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 1.4e-31 139.8 104 68.3
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 3.0e-31 138.7 80 80.0
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 4.0e-31 138.3 110 64.5
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 6.8e-31 137.5 98 70.4
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 8.9e-31 137.1 98 69.4
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 8.9e-31 137.1 110 65.5
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 1.2e-30 136.7 86 75.6
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 2.0e-30 136.0 104 65.4
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 2.6e-30 135.6 98 72.4
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 3.4e-30 135.2 111 59.5
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 3.2e-28 128.6 126 57.1
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 7.0e-28 127.5 104 58.7
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 9.2e-28 127.1 103 66.0
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 2.0e-27 125.9 109 59.6
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 7.8e-27 124.0 99 59.6
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 1.3e-26 123.2 101 60.4
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 1.0e-23 113.6 75 76.0
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 2.3e-23 112.5 93 61.3
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 3.1e-23 112.1 105 65.7
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 3.4e-22 108.6 111 48.6
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 1.3e-21 106.7 109 51.4
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 3.5e-19 98.6 70 65.7
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 3.9e-18 95.1 62 79.0
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.1e-17 93.6 79 57.0
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 2.3e-15 85.9 81 61.7
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 5.2e-15 84.7 66 63.6
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 4.9e-13 78.2 109 39.4
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 3.9e-10 68.6 52 57.7
MCO06G009 Micromonas commoda HOM05D005560 ORTHO05D006862 3.3e-09 65.5 108 34.3
Cre14.g614250 Chlamydomonas reinhardtii HOM05D005560 ORTHO05D006862 8.1e-08 60.8 99 33.3


User provided reference genes

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