Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33865 Trifolium pratense HOM05D006972 ORTHO05D008519 1.9e-104 382.5 193 100.0
Psat2g148200 Pisum sativum HOM05D006972 ORTHO05D008519 3.2e-99 365.2 193 96.4
Ca_24981_v3 Cicer arietinum L. HOM05D006972 ORTHO05D008519 4.3e-96 354.8 193 92.7
Lalb_Chr16g0380011 Lupinus albus HOM05D006972 ORTHO05D008519 2.5e-91 339.0 193 87.6
Glyma.01G158800 Glycine max HOM05D006972 ORTHO05D008519 3.3e-88 328.6 193 85.5
Phvul.002G116601 Phaseolus vulgaris HOM05D006972 ORTHO05D008519 4.8e-87 324.7 193 85.0
VMungo1215G1992 Vigna mungo HOM05D006972 ORTHO05D008519 2.6e-85 318.9 193 83.9
Lj2g0018473 Lotus japonicus HOM05D006972 ORTHO05D008519 6.5e-84 314.3 177 91.5
Cfa007077 Carpinus fangiana HOM05D006972 ORTHO05D008519 3.2e-83 312.0 193 79.8
RcHm_v2.0_Chr2g0097181 Rosa chinensis HOM05D006972 ORTHO05D008519 1.2e-82 310.1 193 79.8
TAR628G0904 Trochodendron aralioides HOM05D006972 ORTHO05D008519 1.6e-82 309.7 193 78.2
Atru.chr3.134 Acer truncatum HOM05D006972 ORTHO05D008519 3.5e-82 308.5 192 80.2
CiPaw.08G181600 Carya illinoinensis HOM05D006972 ORTHO05D008519 7.9e-82 307.4 193 78.8
Prupe.7G182900 Prunus persica HOM05D006972 ORTHO05D008519 7.9e-82 307.4 193 80.8
Manes.01G155400 Manihot esculenta HOM05D006972 ORTHO05D008519 1.8e-81 306.2 191 79.6
GSVIVG01026641001 Vitis vinifera HOM05D006972 ORTHO05D008519 1.8e-81 306.2 193 80.3
Haze_03655 Corylus avellana HOM05D006972 ORTHO05D008519 2.3e-81 305.8 190 78.9
QL06p052953 Quercus lobata HOM05D006972 ORTHO05D008519 3.0e-81 305.4 213 73.2
TWI73G0968 Tripterygium wilfordii HOM05D006972 ORTHO05D008519 1.1e-80 303.5 192 77.6
Potri.005G101501 Populus trichocarpa HOM05D006972 ORTHO05D008519 2.5e-80 302.4 183 80.9
Sed0027466 Sechium edule HOM05D006972 ORTHO05D008519 5.7e-80 301.2 189 76.7
Ciclev10026547m.g Citrus clementina HOM05D006972 ORTHO05D008519 1.6e-79 299.7 192 77.1
Cpa.g.sc365.5 Carica papaya HOM05D006972 ORTHO05D008519 3.7e-79 298.5 189 76.7
MSTRG.3630 Avicennia marina HOM05D006972 ORTHO05D008519 4.8e-79 298.1 193 75.1
FAN19G2622 Fragaria x ananassa HOM05D006972 ORTHO05D008519 8.2e-79 297.4 185 80.0
Medtr5g024200 Medicago truncatula HOM05D006972 ORTHO05D008519 1.8e-78 296.2 160 93.1
Eucgr.I02225 Eucalyptus grandis HOM05D006972 ORTHO05D008519 2.4e-78 295.8 193 77.7
Oeu012451.1 Olea europaea HOM05D006972 ORTHO05D008519 4.1e-78 295.0 193 74.1
Rhsim10G0195900 Rhododendron simsii HOM05D006972 ORTHO05D008519 4.1e-78 295.0 192 77.6
SalBow5G0785 Salvia bowleyana HOM05D006972 ORTHO05D008519 5.3e-78 294.7 193 74.1
CANSAT25G3183 Cannabis sativa HOM05D006972 ORTHO05D008519 9.0e-78 293.9 190 76.8
Migut.L00961 Erythranthe guttata HOM05D006972 ORTHO05D008519 1.2e-77 293.5 194 74.7
CSS0043244 Camellia sinensis var. sinensis HOM05D006972 ORTHO05D008519 2.0e-77 292.7 193 74.6
ClCG10G000270 Citrullus lanatus HOM05D006972 ORTHO05D008519 2.6e-77 292.4 188 75.5
Nitab4.5_0005297g0020 Nicotiana tabacum HOM05D006972 ORTHO05D008519 4.5e-77 291.6 191 77.0
Duzib147G0479 Durio zibethinus HOM05D006972 ORTHO05D008519 5.9e-77 291.2 191 72.8
Nitab4.5_0000495g0120 Nicotiana tabacum HOM05D006972 ORTHO05D008519 7.7e-77 290.8 191 75.4
Actinidia17360 Actinidia chinensis HOM05D006972 ORTHO05D008519 1.0e-76 290.4 193 75.1
MELO3C013724.2 Cucumis melo HOM05D006972 ORTHO05D008519 1.3e-76 290.0 189 73.5
vmacro20633 Vaccinium macrocarpon HOM05D006972 ORTHO05D008519 1.7e-76 289.7 192 74.5
Solyc03g032120.3 Solanum lycopersicum HOM05D006972 ORTHO05D008519 3.8e-76 288.5 191 74.9
Thecc.01G005600 Theobroma cacao HOM05D006972 ORTHO05D008519 3.8e-76 288.5 191 71.7
HanXRQChr14g0442531 Helianthus annuus HOM05D006972 ORTHO05D008519 1.9e-75 286.2 190 75.3
Cc07_g11850 Coffea canephora HOM05D006972 ORTHO05D008519 5.5e-75 284.6 190 75.3
arahy.Tifrunner.gnm1.ann1.B19VPR Arachis hypogaea HOM05D006972 ORTHO05D008519 1.2e-74 283.5 166 84.3
arahy.Tifrunner.gnm1.ann1.K20VQB Arachis hypogaea HOM05D006972 ORTHO05D008519 1.2e-74 283.5 166 84.3
Aqoxy5G01011 Aquilegia oxysepala HOM05D006972 ORTHO05D008519 2.1e-74 282.7 193 73.6
CsaV3_3G000300 Cucumis sativus L. HOM05D006972 ORTHO05D008519 2.1e-74 282.7 189 72.5
Lsat_1_v5_gn_2_73640 Lactuca sativa HOM05D006972 ORTHO05D008519 7.9e-74 280.8 190 73.7
Nn5g30989 Nelumbo nucifera HOM05D006972 ORTHO05D008519 7.9e-74 280.8 235 63.8
ECA238G2655 Erigeron canadensis HOM05D006972 ORTHO05D008519 1.4e-73 280.0 190 75.8
AL8G45620 Arabidopsis lyrata HOM05D006972 ORTHO05D008519 1.8e-73 279.6 193 70.5
THA.LOC104826441 Tarenaya hassleriana HOM05D006972 ORTHO05D008519 6.7e-73 277.7 193 71.5
Gohir.A07G171100 Gossypium hirsutum HOM05D006972 ORTHO05D008519 1.1e-72 276.9 181 70.7
Gohir.D07G177900 Gossypium hirsutum HOM05D006972 ORTHO05D008519 4.3e-72 275.0 191 67.0
Gorai.001G199000 Gossypium raimondii HOM05D006972 ORTHO05D008519 1.7e-71 273.1 181 70.2
MBI05_g14344_MAGBIO Magnolia biondii HOM05D006972 ORTHO05D008519 1.7e-71 273.1 186 74.2
Zm00001eb002450 Zea mays HOM05D006972 ORTHO05D008519 3.7e-71 271.9 181 71.8
EL10Ac5g11121 Beta vulgaris HOM05D006972 ORTHO05D008519 4.8e-71 271.6 191 68.6
AT5G66005 Arabidopsis thaliana HOM05D006972 ORTHO05D008519 1.5e-69 266.5 193 66.8
AUR62021571 Chenopodium quinoa HOM05D006972 ORTHO05D008519 1.0e-68 263.8 193 66.8
PSO541G2195 Papaver somniferum HOM05D006972 ORTHO05D008519 1.0e-68 263.8 189 69.3
FAN23G2574 Fragaria x ananassa HOM05D006972 ORTHO05D008519 2.2e-68 262.7 230 63.0
CAN.G354.14 Capsicum annuum HOM05D006972 ORTHO05D008519 3.8e-68 261.9 177 72.9
Haze_03661 Corylus avellana HOM05D006972 ORTHO05D008519 5.0e-68 261.5 153 84.3
ATR0807G046 Amborella trichopoda HOM05D006972 ORTHO05D008519 8.5e-68 260.8 189 69.3
Ah.02g113990 Amaranthus hybridus HOM05D006972 ORTHO05D008519 1.1e-67 260.4 190 64.2
FvH4_1g10330 Fragaria vesca HOM05D006972 ORTHO05D008519 1.4e-67 260.0 162 79.0
Hund19696 Selenicereus undatus HOM05D006972 ORTHO05D008519 1.4e-67 260.0 189 67.2
AUR62008520 Chenopodium quinoa HOM05D006972 ORTHO05D008519 3.2e-67 258.8 191 66.0
PSO675G3277 Papaver somniferum HOM05D006972 ORTHO05D008519 4.7e-66 255.0 167 73.1
CDE04G1133 Ceratophyllum demersum HOM05D006972 ORTHO05D008519 1.3e-63 246.9 175 67.4
HPP92_026034 Vanilla planifolia HOM05D006972 ORTHO05D008519 2.2e-63 246.1 187 65.2
COL.COLO4_24144 Corchorus olitorius HOM05D006972 ORTHO05D008519 3.7e-63 245.4 169 69.2
Carub.0008s2851 Capsella rubella HOM05D006972 ORTHO05D008519 4.8e-63 245.0 209 61.7
Sc03g0003950 Simmondsia chinensis HOM05D006972 ORTHO05D008519 1.5e-61 240.0 153 73.2
SGA_v2.0_scaffold132G34519 Striga asiatica HOM05D006972 ORTHO05D008519 5.9e-61 238.0 172 68.0
RcHm_v2.0_Chr1g0346531 Rosa chinensis HOM05D006972 ORTHO05D008519 4.7e-58 228.4 140 79.3
RcHm_v2.0_Chr2g0090391 Rosa chinensis HOM05D006972 ORTHO05D008519 8.0e-58 227.6 140 79.3
FAN26G0227 Fragaria x ananassa HOM05D006972 ORTHO05D008519 2.3e-49 199.5 154 68.2
unitig_747.g21812 Utricularia gibba HOM05D006972 ORTHO05D008519 1.2e-48 197.2 211 54.0
Peaxi162Scf00122g02416 Petunia axillaris HOM05D006972 ORTHO05D008519 8.3e-47 191.0 119 78.2
MD15G1231300 Malus domestica HOM05D006972 ORTHO05D008519 9.1e-46 187.6 118 78.0
FAN28G2862 Fragaria x ananassa HOM05D006972 ORTHO05D008519 4.5e-45 185.3 110 82.7
Mapoly0114s0024 Marchantia polymorpha HOM05D006972 ORTHO05D008519 2.7e-42 176.0 208 51.4
Os03g0130750 Oryza sativa ssp. japonica HOM05D006972 ORTHO05D008519 3.6e-42 175.6 126 67.5
Sopen03g005970 Solanum pennellii HOM05D006972 ORTHO05D008519 5.9e-37 158.3 103 74.8
Glyma.11G085800 Glycine max HOM05D006972 ORTHO05D008519 4.2e-35 152.1 147 60.5
Lsat_1_v5_gn_5_10160 Lactuca sativa HOM05D006972 ORTHO05D008519 1.4e-33 147.1 107 71.0
CANSAT35G0485 Cannabis sativa HOM05D006972 ORTHO05D008519 4.0e-33 145.6 90 81.1
SMO352G0055 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 2.0e-32 143.3 133 59.4
RcHm_v2.0_Chr5g0047551 Rosa chinensis HOM05D006972 ORTHO05D008519 4.1e-30 135.6 83 78.3
Cre16.g682050 Chlamydomonas reinhardtii HOM05D006972 ORTHO05D008519 7.8e-29 131.3 188 45.2
RcHm_v2.0_Chr5g0015201 Rosa chinensis HOM05D006972 ORTHO05D008519 5.0e-28 128.6 71 85.9
MD15G1231400 Malus domestica HOM05D006972 ORTHO05D008519 4.7e-26 122.1 73 79.5
Mapoly0023s0154 Marchantia polymorpha HOM05D006972 ORTHO05D008519 2.0e-24 116.7 183 36.6
Actinidia22899 Actinidia chinensis HOM05D006972 ORTHO05D008519 3.4e-24 115.9 76 76.3
Pp3c7_7150 Physcomitrium patens HOM05D006972 ORTHO05D008519 4.9e-23 112.1 183 36.6
MCO16G109 Micromonas commoda HOM05D006972 ORTHO05D008519 1.4e-22 110.5 192 37.5
SMO147G0393 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 1.6e-21 107.1 130 40.0
Pp3c11_19180 Physcomitrium patens HOM05D006972 ORTHO05D008519 2.7e-21 106.3 183 35.0
Lsat_1_v5_gn_1_125281 Lactuca sativa HOM05D006972 ORTHO05D008519 5.6e-19 98.6 60 78.3
PRCOL_00004399 Prasinoderma coloniale HOM05D006972 ORTHO05D008519 2.8e-18 96.3 175 37.7
Lsat_1_v5_gn_8_30121 Lactuca sativa HOM05D006972 ORTHO05D008519 3.6e-18 95.9 60 80.0
CBR_g19759 Chara braunii HOM05D006972 ORTHO05D008519 5.2e-17 92.0 128 44.5
arahy.Tifrunner.gnm1.ann1.9GY3HT Arachis hypogaea HOM05D006972 ORTHO05D008519 8.9e-17 91.3 74 62.2
arahy.Tifrunner.gnm1.ann1.J6JT3S Arachis hypogaea HOM05D006972 ORTHO05D008519 2.0e-16 90.1 56 75.0
MD02G1111700 Malus domestica HOM05D006972 ORTHO05D008519 3.5e-13 79.3 171 33.3
arahy.Tifrunner.gnm1.ann1.A1T4XS Arachis hypogaea HOM05D006972 ORTHO05D008519 3.1e-09 66.2 59 54.2
arahy.Tifrunner.gnm1.ann1.BGC890 Arachis hypogaea HOM05D006972 ORTHO05D008519 1.2e-08 64.3 61 52.5
RcHm_v2.0_Chr5g0015211 Rosa chinensis HOM05D006972 ORTHO05D008519 4.9e-07 58.9 33 78.8
Migut.L00776 Erythranthe guttata HOM05D006972 ORTHO05D008519 1.4e-06 57.4 30 83.3


User provided reference genes

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