Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33859 Trifolium pratense HOM05D013061 ORTHO05D019266 5.1e-105 384.4 195 100.0
TPR.G33856 Trifolium pratense HOM05D013061 ORTHO05D019266 2.1e-50 203.0 156 64.7
Psat1g162240 Pisum sativum HOM05D013061 ORTHO05D019266 3.6e-50 202.2 189 55.6
Medtr2g033720 Medicago truncatula HOM05D013061 ORTHO05D019266 1.3e-47 193.7 197 52.8
Medtr2g033740 Medicago truncatula HOM05D013061 ORTHO05D019266 9.2e-46 187.6 193 52.3
Lalb_Chr15g0089141 Lupinus albus HOM05D013061 ORTHO05D019266 4.3e-35 152.1 192 42.7
Glyma.17G035600 Glycine max HOM05D013061 ORTHO05D001207 2.9e-23 112.8 182 35.7
Lj6g0025245 Lotus japonicus HOM05D013061 ORTHO05D019266 1.9e-22 110.2 185 36.8
TPR.G25403 Trifolium pratense HOM05D013061 ORTHO05D001207 4.6e-21 105.5 194 32.5
Psat4g021840 Pisum sativum HOM05D013061 ORTHO05D001207 1.5e-19 100.5 192 31.8
Phvul.003G116500 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 1.6e-18 97.1 179 30.7
Medtr4g122660 Medicago truncatula HOM05D001578 ORTHO05D001207 2.1e-18 96.7 186 32.3
COL.COLO4_34578 Corchorus olitorius HOM05D001578 ORTHO05D001207 1.1e-14 84.3 181 32.0
Medtr2g033670 Medicago truncatula HOM05D013061 ORTHO05D019266 1.9e-14 83.6 93 46.2
Duzib151G1057 Durio zibethinus HOM05D001578 ORTHO05D001207 3.2e-14 82.8 180 32.8
COL.COLO4_34581 Corchorus olitorius HOM05D001578 ORTHO05D001207 5.5e-14 82.0 181 31.5
Duzib052G1048 Durio zibethinus HOM05D001578 ORTHO05D001207 1.2e-13 80.9 162 30.9
Ca_21426_v3 Cicer arietinum L. HOM05D013061 ORTHO05D001207 1.0e-12 77.8 145 32.4
Lj4g0008198 Lotus japonicus HOM05D013061 ORTHO05D001207 3.0e-12 76.3 193 28.0
Sabra10G0162100 Salix brachista HOM05D004113 ORTHO05D005233 3.0e-12 76.3 159 30.8
Thecc.04G304700 Theobroma cacao HOM05D001578 ORTHO05D001207 5.1e-12 75.5 177 28.8
Haze_01333 Corylus avellana HOM05D001578 ORTHO05D001207 8.7e-12 74.7 180 27.8
Haze_01338 Corylus avellana HOM05D001578 ORTHO05D001207 8.7e-12 74.7 180 27.8
Gohir.D10G180600 Gossypium hirsutum HOM05D001578 ORTHO05D001207 1.1e-11 74.3 173 29.5
Gorai.011G202100 Gossypium raimondii HOM05D001578 ORTHO05D001207 1.1e-11 74.3 173 29.5
Sabra08G0077500 Salix brachista HOM05D001578 ORTHO05D001207 1.1e-11 74.3 176 29.5
Prupe.1G113800 Prunus persica HOM05D001578 ORTHO05D001207 1.5e-11 73.9 186 28.0
CiPaw.01G136000 Carya illinoinensis HOM05D001578 ORTHO05D001207 3.3e-11 72.8 185 28.6
Ciclev10006032m.g Citrus clementina HOM05D001578 ORTHO05D001207 9.6e-11 71.2 178 27.5
VMungo1215G0431 Vigna mungo HOM05D001578 ORTHO05D001207 1.3e-10 70.9 183 27.9
RcHm_v2.0_Chr4g0425861 Rosa chinensis HOM05D001578 ORTHO05D001207 1.6e-10 70.5 175 26.9
MD13G1149800 Malus domestica HOM05D001578 ORTHO05D001207 3.7e-10 69.3 184 28.8
Potri.010G209800 Populus trichocarpa HOM05D004113 ORTHO05D005233 3.7e-10 69.3 160 29.4
Gohir.A01G035200 Gossypium hirsutum HOM05D001578 ORTHO05D001207 6.2e-10 68.6 182 26.9
COL.COLO4_34577 Corchorus olitorius HOM05D001578 ORTHO05D001207 8.2e-10 68.2 177 29.4
Gohir.D01G023565 Gossypium hirsutum HOM05D001578 ORTHO05D001207 8.2e-10 68.2 182 26.9
Gorai.002G031100 Gossypium raimondii HOM05D001578 ORTHO05D001207 8.2e-10 68.2 182 26.9
MD16G1150200 Malus domestica HOM05D001578 ORTHO05D001207 1.1e-09 67.8 187 28.9
Medtr4g122720 Medicago truncatula HOM05D001578 ORTHO05D001207 1.1e-09 67.8 158 29.1
Cfa015284 Carpinus fangiana HOM05D001578 ORTHO05D001207 1.4e-09 67.4 177 26.6
FvH4_4g20180 Fragaria vesca HOM05D001578 ORTHO05D001207 1.4e-09 67.4 182 27.5
FAN12G2195 Fragaria x ananassa HOM05D001578 ORTHO05D001207 1.4e-09 67.4 182 27.5
QL06p012819 Quercus lobata HOM05D001578 ORTHO05D001207 1.4e-09 67.4 187 27.8
Ca_21425_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 1.8e-09 67.0 156 29.5
FAN07G0539 Fragaria x ananassa HOM05D001578 ORTHO05D001207 1.8e-09 67.0 172 27.3
Glyma.07G237300 Glycine max HOM05D001578 ORTHO05D001207 1.8e-09 67.0 177 28.2
Manes.15G002000 Manihot esculenta HOM05D001578 ORTHO05D001207 1.8e-09 67.0 182 27.5
CANSAT78G0727 Cannabis sativa HOM05D001578 ORTHO05D001207 2.4e-09 66.6 177 26.0
Ciclev10002621m.g Citrus clementina HOM05D001578 ORTHO05D001207 2.4e-09 66.6 178 28.1
Lj6g0003953 Lotus japonicus HOM05D001578 ORTHO05D001207 3.1e-09 66.2 181 29.3
Potri.008G102600 Populus trichocarpa HOM05D001578 ORTHO05D001207 3.1e-09 66.2 187 27.8
Ciclev10003542m.g Citrus clementina HOM05D001578 ORTHO05D001207 4.0e-09 65.9 175 30.3
Eucgr.H04067 Eucalyptus grandis HOM05D001578 ORTHO05D001207 4.0e-09 65.9 182 27.5
TPR.G25397 Trifolium pratense HOM05D001578 ORTHO05D001207 4.0e-09 65.9 186 28.0
Atru.chr4.3054 Acer truncatum HOM05D001578 ORTHO05D001207 6.9e-09 65.1 153 27.5
Ciclev10004017m.g Citrus clementina HOM05D001578 ORTHO05D001207 6.9e-09 65.1 176 28.4
Glyma.17G036400 Glycine max HOM05D001578 ORTHO05D001207 6.9e-09 65.1 176 27.3
Peaxi162Scf01160g00142 Petunia axillaris HOM05D001578 ORTHO05D001207 9.0e-09 64.7 170 28.2
TPR.G25409 Trifolium pratense HOM05D001578 ORTHO05D001207 1.2e-08 64.3 158 28.5
Ca_21409_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 1.5e-08 63.9 156 28.8
Ca_21424_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 1.5e-08 63.9 156 28.8
Lalb_Chr07g0181941 Lupinus albus HOM05D001578 ORTHO05D001207 1.5e-08 63.9 190 28.9
Lalb_Chr12g0200781 Lupinus albus HOM05D001578 ORTHO05D001207 1.5e-08 63.9 174 30.5
Haze_01334 Corylus avellana HOM05D001578 ORTHO05D001207 2.0e-08 63.5 178 27.0
CSS0012414 Camellia sinensis var. sinensis HOM05D001578 ORTHO05D001207 2.6e-08 63.2 177 29.9
MD13G1149700 Malus domestica HOM05D001578 ORTHO05D001207 2.6e-08 63.2 191 27.7
QL06p012845 Quercus lobata HOM05D001578 ORTHO05D001207 2.6e-08 63.2 178 25.3
Thecc.04G305000 Theobroma cacao HOM05D001578 ORTHO05D001207 2.6e-08 63.2 178 28.7
Atru.chr4.3056 Acer truncatum HOM05D001578 ORTHO05D001207 4.5e-08 62.4 182 27.5
Haze_01339 Corylus avellana HOM05D001578 ORTHO05D001207 4.5e-08 62.4 178 27.0
Glyma.09G033700 Glycine max HOM05D001578 ORTHO05D001207 4.5e-08 62.4 184 31.0
Glyma.15G138400 Glycine max HOM05D001578 ORTHO05D001207 4.5e-08 62.4 153 30.1
CAN.G1075.28 Capsicum annuum HOM05D001578 ORTHO05D001207 5.8e-08 62.0 157 29.9
Duzib151G0004 Durio zibethinus HOM05D001578 ORTHO05D001207 5.8e-08 62.0 178 26.4
Phvul.003G117200 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 5.8e-08 62.0 176 27.3
Phvul.006G119800 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 5.8e-08 62.0 183 29.5
TPR.G25407 Trifolium pratense HOM05D001578 ORTHO05D001207 5.8e-08 62.0 177 25.4
Gorai.011G202200 Gossypium raimondii HOM05D001578 ORTHO05D001207 7.6e-08 61.6 151 30.5
Lalb_Chr15g0089101 Lupinus albus HOM05D001578 ORTHO05D001207 7.6e-08 61.6 176 29.5
TWI75G0074 Tripterygium wilfordii HOM05D001578 ORTHO05D001207 7.6e-08 61.6 187 25.7
Hma1.2p1_0078F.1_g039850 Hydrangea macrophylla HOM05D001578 ORTHO05D001207 1.0e-07 61.2 178 28.1
Hma1.2p1_1400F.1_g280915 Hydrangea macrophylla HOM05D001578 ORTHO05D001207 1.0e-07 61.2 178 28.1
Phvul.003G117400 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 1.0e-07 61.2 154 27.3
VMungo0540G0744 Vigna mungo HOM05D001578 ORTHO05D001207 1.0e-07 61.2 180 29.4
Gohir.D10G180700 Gossypium hirsutum HOM05D001578 ORTHO05D001207 1.3e-07 60.8 169 27.8
Sabra08G0077400 Salix brachista HOM05D001578 ORTHO05D001207 1.3e-07 60.8 183 27.3
Lj4g0009388 Lotus japonicus HOM05D001578 ORTHO05D001207 1.7e-07 60.5 181 28.7
Manes.10G035700 Manihot esculenta HOM05D004113 ORTHO05D005233 1.7e-07 60.5 159 24.5
Phvul.003G117300 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 1.7e-07 60.5 165 26.7
Glyma.07G237500 Glycine max HOM05D001578 ORTHO05D001207 2.2e-07 60.1 176 26.1
Glyma.17G036100 Glycine max HOM05D001578 ORTHO05D001207 2.2e-07 60.1 177 28.2
Nitab4.5_0000651g0280 Nicotiana tabacum HOM05D001578 ORTHO05D001207 2.2e-07 60.1 164 29.3
QL06p012837 Quercus lobata HOM05D001578 ORTHO05D001207 2.2e-07 60.1 178 24.7
VMungo1215G0592 Vigna mungo HOM05D001578 ORTHO05D001207 2.2e-07 60.1 151 29.1
Ca_21410_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 2.9e-07 59.7 186 28.0
Gohir.A10G174100 Gossypium hirsutum HOM05D001578 ORTHO05D001207 3.8e-07 59.3 169 27.2
CSS0020686 Camellia sinensis var. sinensis HOM05D001578 ORTHO05D001207 4.9e-07 58.9 177 28.8
Cfa015283 Carpinus fangiana HOM05D001578 ORTHO05D001207 6.5e-07 58.5 177 26.6
Gohir.A10G174050 Gossypium hirsutum HOM05D001578 ORTHO05D001207 6.5e-07 58.5 173 26.0
Lj4g0021583 Lotus japonicus HOM05D001578 ORTHO05D001207 6.5e-07 58.5 151 28.5
Lalb_Chr12g0200791 Lupinus albus HOM05D001578 ORTHO05D001207 6.5e-07 58.5 177 27.7
Psat0s4829g0040 Pisum sativum HOM05D001578 ORTHO05D001207 6.5e-07 58.5 150 30.0
Manes.10G035200 Manihot esculenta HOM05D004113 ORTHO05D005233 8.4e-07 58.2 159 23.3
TPR.G25401 Trifolium pratense HOM05D001578 ORTHO05D001207 8.4e-07 58.2 156 26.9
TWI09G1118 Tripterygium wilfordii HOM05D001578 ORTHO05D001207 8.4e-07 58.2 180 26.7
VMungo1215G1199 Vigna mungo HOM05D001578 ORTHO05D001207 8.4e-07 58.2 155 27.7
DCAR_023358 Daucus carota HOM05D001578 ORTHO05D001207 1.1e-06 57.8 176 26.7
QL06p012826 Quercus lobata HOM05D001578 ORTHO05D001207 1.1e-06 57.8 178 27.0
TPR.G25429 Trifolium pratense HOM05D001578 ORTHO05D001207 1.1e-06 57.8 189 26.5
Actinidia18466 Actinidia chinensis HOM05D001578 ORTHO05D001207 1.4e-06 57.4 155 29.7
Glyma.17G036300 Glycine max HOM05D001578 ORTHO05D001207 1.4e-06 57.4 177 27.1
Phvul.003G116900 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 1.4e-06 57.4 151 27.8
PGR004G2339 Punica granatum HOM05D001578 ORTHO05D001207 1.4e-06 57.4 180 25.6
Thecc.01G317500 Theobroma cacao HOM05D001578 ORTHO05D001207 1.4e-06 57.4 162 28.4
CAN.G484.68 Capsicum annuum HOM05D001578 ORTHO05D001207 1.9e-06 57.0 171 28.7
Rhsim04G0244100 Rhododendron simsii HOM05D003146 ORTHO05D001819 1.9e-06 57.0 171 27.5
Lalb_Chr07g0181951 Lupinus albus HOM05D001578 ORTHO05D001207 2.5e-06 56.6 183 28.4
Prupe.5G112600 Prunus persica HOM05D001578 ORTHO05D001207 2.5e-06 56.6 183 24.6
PGSC0003DMG400037039 Solanum tuberosum HOM05D004113 ORTHO05D005233 3.2e-06 56.2 142 28.2
Manes.10G035400 Manihot esculenta HOM05D004113 ORTHO05D005233 4.2e-06 55.8 159 23.3
MD16G1150100 Malus domestica HOM05D001578 ORTHO05D001207 5.5e-06 55.5 176 26.1
Medtr2g033630 Medicago truncatula HOM05D001578 ORTHO05D001207 5.5e-06 55.5 185 28.6
RcHm_v2.0_Chr4g0426481 Rosa chinensis HOM05D001578 ORTHO05D001207 7.1e-06 55.1 182 26.9
Manes.02G201700 Manihot esculenta HOM05D001578 ORTHO05D001207 9.3e-06 54.7 182 26.4
TAR365G0682 Trochodendron aralioides HOM05D001578 ORTHO05D001207 9.3e-06 54.7 162 26.5


User provided reference genes

Program Settings