Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 4.1e-275 951.0 576 100.0
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 1.6e-130 470.7 595 59.8
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 2.7e-130 469.9 536 58.2
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 9.8e-112 408.3 593 57.2
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 1.0e-108 398.3 611 47.5
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 1.7e-108 397.5 652 48.2
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 1.1e-99 368.2 649 44.4
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 3.5e-85 320.1 599 43.1
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 7.3e-83 312.4 511 46.4
Psat1g013640 Pisum sativum HOM05D006718 ORTHO05D008492 1.3e-63 248.4 591 39.1
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 6.7e-52 209.5 638 34.5
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 4.8e-42 176.8 576 37.7
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 2.7e-37 161.0 287 43.6
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 3.6e-37 160.6 571 32.6
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 1.0e-36 159.1 639 32.2
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 3.0e-36 157.5 604 32.6
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 3.9e-36 157.1 608 32.2
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 5.1e-36 156.8 622 33.1
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 6.7e-36 156.4 549 35.0
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 2.6e-35 154.5 542 31.9
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 3.3e-35 154.1 614 31.4
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 5.7e-35 153.3 471 33.8
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 8.2e-34 149.4 607 31.8
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 4.1e-33 147.1 612 31.7
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 9.1e-33 146.0 612 31.5
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 1.2e-32 145.6 575 33.4
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.6e-32 145.2 604 31.8
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 2.2e-31 141.4 548 32.1
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 1.5e-30 138.7 511 30.5
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 5.5e-30 136.7 592 31.4
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 1.6e-29 135.2 272 44.9
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 3.6e-29 134.0 287 41.1
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 4.7e-29 133.7 525 30.5
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 2.3e-28 131.3 257 42.0
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 3.0e-28 131.0 555 31.2
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 8.8e-28 129.4 548 30.7
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 2.0e-27 128.3 214 41.6
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 3.3e-27 127.5 208 42.3
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 5.7e-27 126.7 257 40.5
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 7.5e-27 126.3 193 44.0
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 1.3e-26 125.6 240 38.3
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 1.3e-26 125.6 240 38.3
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 1.7e-26 125.2 192 41.7
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 2.2e-26 124.8 281 37.7
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 3.7e-26 124.0 254 40.6
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 6.3e-26 123.2 211 39.3
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 6.3e-26 123.2 248 37.1
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 8.2e-26 122.9 232 40.9
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 1.1e-25 122.5 469 31.6
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 1.1e-25 122.5 237 38.0
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 1.4e-25 122.1 265 37.0
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 2.4e-25 121.3 522 30.8
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 2.4e-25 121.3 469 31.6
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 3.1e-25 120.9 257 35.0
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 4.1e-25 120.6 312 36.2
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 5.3e-25 120.2 549 29.9
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 9.1e-25 119.4 252 40.1
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 9.1e-25 119.4 551 29.2
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 1.2e-24 119.0 224 39.7
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 2.0e-24 118.2 285 35.8
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 2.0e-24 118.2 556 28.8
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 2.7e-24 117.9 241 38.6
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 2.7e-24 117.9 243 35.8
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 2.7e-24 117.9 243 35.8
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 2.7e-24 117.9 469 31.3
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 2.7e-24 117.9 652 28.4
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 4.5e-24 117.1 310 37.1
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 4.5e-24 117.1 198 38.9
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 5.9e-24 116.7 253 36.8
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 5.9e-24 116.7 260 35.0
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 7.7e-24 116.3 486 28.6
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 1.3e-23 115.5 229 40.2
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 2.2e-23 114.8 265 37.4
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 2.2e-23 114.8 267 36.0
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 2.9e-23 114.4 191 42.9
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 2.9e-23 114.4 329 35.3
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 1.1e-22 112.5 229 38.0
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 4.2e-22 110.5 503 29.6
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 4.2e-22 110.5 297 37.4
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 4.2e-22 110.5 251 37.5
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 7.2e-22 109.8 586 29.2
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 7.2e-22 109.8 267 37.5
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 1.2e-21 109.0 187 40.1
Psat2g067120 Pisum sativum HOM05D006718 ORTHO05D008492 2.1e-21 108.2 94 70.2
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 2.7e-21 107.8 186 40.3
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 2.3e-20 104.8 577 29.1
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 3.0e-20 104.4 232 35.8
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 3.0e-20 104.4 208 37.0
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 5.2e-20 103.6 261 36.8
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 5.2e-20 103.6 207 41.1
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 5.2e-20 103.6 208 42.3
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 6.8e-20 103.2 505 30.7
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 2.0e-19 101.7 262 35.9
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 5.7e-19 100.1 518 27.2
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 1.3e-18 99.0 577 26.9
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 4.1e-17 94.0 222 33.8
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 5.4e-17 93.6 562 28.1
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 1.2e-16 92.4 176 38.6
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 1.6e-16 92.0 612 29.9
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 1.3e-15 89.0 555 28.1
Psat0s1639g0200 Pisum sativum HOM05D006718 ORTHO05D008492 2.6e-11 74.7 83 54.2
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 7.5e-11 73.2 481 31.4
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 1.3e-10 72.4 578 30.4
Psat2g100040 Pisum sativum HOM05D006718 ORTHO05D008492 2.7e-08 64.7 144 36.8
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 5.6e-06 57.0 312 26.3


User provided reference genes

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