Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33735 Trifolium pratense HOM05D000609 ORTHO05D000462 4.2e-51 204.5 112 100.0
Medtr5g009410 Medicago truncatula HOM05D000609 ORTHO05D000462 2.5e-27 125.6 112 71.4
Ca_24516_v3 Cicer arietinum L. HOM05D000609 ORTHO05D000462 4.7e-26 121.3 115 67.0
Psat0s2105g0240 Pisum sativum HOM05D000609 ORTHO05D000462 8.8e-25 117.1 113 64.6
LjContig00312_ERROPOS870357g0025706 Lotus japonicus HOM05D000609 ORTHO05D000462 2.0e-21 105.9 121 58.7
VMungo1215G2270 Vigna mungo HOM05D000609 ORTHO05D000462 4.7e-18 94.7 122 53.3
Phvul.002G163700 Phaseolus vulgaris HOM05D000609 ORTHO05D000462 4.0e-17 91.7 115 53.9
Glyma.01G225000 Glycine max HOM05D000609 ORTHO05D000462 2.6e-16 89.0 111 55.0
Lalb_Chr09g0320671 Lupinus albus HOM05D000609 ORTHO05D000462 1.7e-15 86.3 109 53.2
Lalb_Chr05g0211591 Lupinus albus HOM05D000609 ORTHO05D000462 3.1e-14 82.0 103 54.4
MD14G1127700 Malus domestica HOM05D000609 ORTHO05D000462 4.1e-14 81.6 101 58.4
MD06G1105500 Malus domestica HOM05D000609 ORTHO05D000462 7.0e-14 80.9 113 52.2
Duzib068G0150 Durio zibethinus HOM05D000609 ORTHO05D000462 7.7e-13 77.4 89 51.7
Potri.001G092400 Populus trichocarpa HOM05D000609 ORTHO05D000462 1.7e-12 76.3 102 50.0
Dinv38839 Davidia involucrata HOM05D000609 ORTHO05D000462 2.9e-12 75.5 93 54.8
Prupe.5G117800 Prunus persica HOM05D000609 ORTHO05D000462 5.0e-12 74.7 109 51.4
Duzib205G0449 Durio zibethinus HOM05D000609 ORTHO05D000462 6.5e-12 74.3 90 51.1
Gohir.D08G130900 Gossypium hirsutum HOM05D000609 ORTHO05D000462 1.9e-11 72.8 86 52.3
Gorai.004G133800 Gossypium raimondii HOM05D000609 ORTHO05D000462 1.9e-11 72.8 86 52.3
Lj4g0021122 Lotus japonicus HOM05D000609 ORTHO05D000462 1.9e-11 72.8 95 54.7
Atru.chr9.2009 Acer truncatum HOM05D000609 ORTHO05D000462 2.5e-11 72.4 113 46.0
Ciclev10021265m.g Citrus clementina HOM05D000609 ORTHO05D000462 2.5e-11 72.4 111 45.0
CiPaw.11G122100 Carya illinoinensis HOM05D000609 ORTHO05D000462 3.2e-11 72.0 94 48.9
Duzib084G0507 Durio zibethinus HOM05D000609 ORTHO05D000462 4.2e-11 71.6 89 49.4
Glyma.11G018100 Glycine max HOM05D000609 ORTHO05D000462 5.5e-11 71.2 116 48.3
Gohir.A08G110900 Gossypium hirsutum HOM05D000609 ORTHO05D000462 5.5e-11 71.2 86 51.2
Sabra01G0068600 Salix brachista HOM05D000609 ORTHO05D000462 5.5e-11 71.2 102 46.1
CAN.G792.41 Capsicum annuum HOM05D000609 ORTHO05D000462 7.2e-11 70.9 77 53.2
Dinv37539 Davidia involucrata HOM05D000609 ORTHO05D000462 7.2e-11 70.9 102 50.0
Hma1.2p1_0359F.1_g135286 Hydrangea macrophylla HOM05D000609 ORTHO05D000462 7.2e-11 70.9 94 47.9
Hma1.2p1_2596F.1_g325090 Hydrangea macrophylla HOM05D000609 ORTHO05D000462 7.2e-11 70.9 94 47.9
Gorai.006G207800 Gossypium raimondii HOM05D000609 ORTHO05D000462 1.2e-10 70.1 78 52.6
Cfa023583 Carpinus fangiana HOM05D000609 ORTHO05D000462 2.7e-10 68.9 112 42.9
Cc08_g15980 Coffea canephora HOM05D000609 ORTHO05D000462 2.7e-10 68.9 106 45.3
Gohir.D09G185300 Gossypium hirsutum HOM05D000609 ORTHO05D000462 2.7e-10 68.9 78 52.6
GSVIVG01019519001 Vitis vinifera HOM05D000609 ORTHO05D000462 2.7e-10 68.9 105 49.5
Manes.02G010700 Manihot esculenta HOM05D000609 ORTHO05D000462 3.6e-10 68.6 99 49.5
Potri.003G139300 Populus trichocarpa HOM05D000609 ORTHO05D000462 4.7e-10 68.2 99 47.5
Sopen08g004160 Solanum pennellii HOM05D000609 ORTHO05D000462 6.1e-10 67.8 94 46.8
Thecc.03G296600 Theobroma cacao HOM05D000609 ORTHO05D000462 6.1e-10 67.8 100 48.0
Gohir.A09G190700 Gossypium hirsutum HOM05D000609 ORTHO05D000462 8.0e-10 67.4 89 47.2
CiPaw.12G083900 Carya illinoinensis HOM05D000609 ORTHO05D000462 1.0e-09 67.0 95 50.5
Haze_08621 Corylus avellana HOM05D000609 ORTHO05D000462 1.0e-09 67.0 112 42.0
Haze_08622 Corylus avellana HOM05D000609 ORTHO05D000462 1.0e-09 67.0 112 42.0
Eucgr.E00857 Eucalyptus grandis HOM05D000609 ORTHO05D000462 1.0e-09 67.0 99 48.5
Sabra03G0100500 Salix brachista HOM05D000609 ORTHO05D000462 3.0e-09 65.5 85 49.4
PGSC0003DMG400005837 Solanum tuberosum HOM05D000609 ORTHO05D000462 4.0e-09 65.1 94 45.7
Hma1.2p1_0229F.1_g097160 Hydrangea macrophylla HOM05D000609 ORTHO05D000462 5.2e-09 64.7 89 48.3
QL02p030845 Quercus lobata HOM05D000609 ORTHO05D000462 5.2e-09 64.7 113 44.2
Solyc08g082210.4 Solanum lycopersicum HOM05D000609 ORTHO05D000462 5.2e-09 64.7 103 43.7
Peaxi162Scf00102g01713 Petunia axillaris HOM05D000609 ORTHO05D000462 6.8e-09 64.3 96 44.8
TWI15G1182 Tripterygium wilfordii HOM05D000609 ORTHO05D000462 6.8e-09 64.3 95 51.6
FAN04G1328 Fragaria x ananassa HOM05D000609 ORTHO05D000462 8.8e-09 63.9 95 48.4
Lalb_Chr16g0390641 Lupinus albus HOM05D000609 ORTHO05D000462 8.8e-09 63.9 84 45.2
TWI81G1020 Tripterygium wilfordii HOM05D000609 ORTHO05D000462 8.8e-09 63.9 91 49.5
AUR62010831 Chenopodium quinoa HOM05D000609 ORTHO05D000462 1.2e-08 63.5 114 42.1
AUR62019829 Chenopodium quinoa HOM05D000609 ORTHO05D000462 1.2e-08 63.5 114 42.1
Solyc08g008305.1 Solanum lycopersicum HOM05D000609 ORTHO05D000462 1.2e-08 63.5 94 45.7
FAN18G0766 Fragaria x ananassa HOM05D000609 ORTHO05D000462 1.5e-08 63.2 95 48.4
TAR629G1026 Trochodendron aralioides HOM05D000609 ORTHO05D000462 1.5e-08 63.2 93 44.1
CANSAT21G0607 Cannabis sativa HOM05D000609 ORTHO05D000462 2.0e-08 62.8 108 39.8
Cpa.g.sc79.43 Carica papaya HOM05D000609 ORTHO05D000462 2.0e-08 62.8 80 53.8
FvH4_5g04470 Fragaria vesca HOM05D000609 ORTHO05D000462 2.0e-08 62.8 95 48.4
FAN08G3397 Fragaria x ananassa HOM05D000609 ORTHO05D000462 2.0e-08 62.8 95 48.4
FAN18G3576 Fragaria x ananassa HOM05D000609 ORTHO05D000462 2.0e-08 62.8 95 48.4
Gohir.D12G237300 Gossypium hirsutum HOM05D000609 ORTHO05D000462 2.0e-08 62.8 90 51.1
Gorai.008G253900 Gossypium raimondii HOM05D000609 ORTHO05D000462 2.0e-08 62.8 90 51.1
MBI06_g05047_MAGBIO Magnolia biondii HOM05D000609 ORTHO05D000462 2.0e-08 62.8 72 50.0
Peaxi162Scf00074g00101 Petunia axillaris HOM05D000609 ORTHO05D000462 2.0e-08 62.8 104 45.2
CSS0013568 Camellia sinensis var. sinensis HOM05D000609 ORTHO05D000462 5.7e-08 61.2 100 48.0
CAN.G532.114 Capsicum annuum HOM05D000609 ORTHO05D000462 5.7e-08 61.2 103 41.7
Gohir.A12G236100 Gossypium hirsutum HOM05D000609 ORTHO05D000462 7.5e-08 60.8 87 50.6
ECA246G4012 Erigeron canadensis HOM05D000609 ORTHO05D000462 9.8e-08 60.5 69 60.9
Gohir.A11G024900 Gossypium hirsutum HOM05D000609 ORTHO05D000462 9.8e-08 60.5 99 41.4
Rhsim07G0082700 Rhododendron simsii HOM05D000609 ORTHO05D000462 9.8e-08 60.5 89 46.1
DCAR_027706 Daucus carota HOM05D000609 ORTHO05D000462 1.3e-07 60.1 88 52.3
Gorai.007G026200 Gossypium raimondii HOM05D000609 ORTHO05D000462 1.3e-07 60.1 99 40.4
Ah.12g052490 Amaranthus hybridus HOM05D000609 ORTHO05D000462 1.7e-07 59.7 97 45.4
Gohir.D11G024500 Gossypium hirsutum HOM05D000609 ORTHO05D000462 1.7e-07 59.7 99 40.4
Ah.07g197320 Amaranthus hybridus HOM05D000609 ORTHO05D000462 2.8e-07 58.9 83 50.6
Oeu038565.1 Olea europaea HOM05D000609 ORTHO05D000462 2.8e-07 58.9 94 42.6
PGSC0003DMG400012154 Solanum tuberosum HOM05D000609 ORTHO05D000462 2.8e-07 58.9 103 40.8
AL2G10480 Arabidopsis lyrata HOM05D000609 ORTHO05D000462 3.7e-07 58.5 80 47.5
Carub.0002s0040 Capsella rubella HOM05D000609 ORTHO05D000462 3.7e-07 58.5 84 47.6
Migut.A00662 Erythranthe guttata HOM05D000609 ORTHO05D000462 3.7e-07 58.5 69 58.0
TAR375G0867 Trochodendron aralioides HOM05D000609 ORTHO05D000462 3.7e-07 58.5 100 44.0
HanXRQChr17g0535231 Helianthus annuus HOM05D000609 ORTHO05D000462 6.3e-07 57.8 73 56.2
Aqoxy5G04204 Aquilegia oxysepala HOM05D000609 ORTHO05D000462 8.3e-07 57.4 72 52.8
THA.LOC104823612 Tarenaya hassleriana HOM05D000609 ORTHO05D000462 1.1e-06 57.0 66 56.1
TAR374G0239 Trochodendron aralioides HOM05D000609 ORTHO05D000462 1.4e-06 56.6 94 42.6
Lsat_1_v5_gn_3_10461 Lactuca sativa HOM05D000609 ORTHO05D000462 1.8e-06 56.2 91 50.5
AT1G64380 Arabidopsis thaliana HOM05D000609 ORTHO05D000462 2.4e-06 55.8 80 46.2
MSTRG.13883 Avicennia marina HOM05D000609 ORTHO05D000462 2.4e-06 55.8 81 44.4
CSS0015617 Camellia sinensis var. sinensis HOM05D000609 ORTHO05D000462 2.4e-06 55.8 90 47.8
CSS0038171 Camellia sinensis var. sinensis HOM05D000609 ORTHO05D000462 2.4e-06 55.8 90 47.8
MSTRG.25666 Avicennia marina HOM05D000609 ORTHO05D000462 3.1e-06 55.5 90 46.7
DCAR_005039 Daucus carota HOM05D000609 ORTHO05D000462 3.1e-06 55.5 90 47.8
MSTRG.11929 Avicennia marina HOM05D000609 ORTHO05D000462 4.1e-06 55.1 73 47.9
Rhsim02G0242500 Rhododendron simsii HOM05D000609 ORTHO05D000462 4.1e-06 55.1 102 42.2
Sc01g0010260 Simmondsia chinensis HOM05D000609 ORTHO05D000462 4.1e-06 55.1 118 37.3
Actinidia22728 Actinidia chinensis HOM05D000609 ORTHO05D000462 7.0e-06 54.3 91 44.0
PGR031G3523 Punica granatum HOM05D000609 ORTHO05D000462 7.0e-06 54.3 73 52.1
Actinidia22149 Actinidia chinensis HOM05D000609 ORTHO05D000462 9.1e-06 53.9 103 44.7


User provided reference genes

Program Settings