Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33726 Trifolium pratense HOM05D001560 ORTHO05D003613 1.3e-69 266.2 129 100.0
TPR.G39706 Trifolium pratense HOM05D001560 ORTHO05D003613 3.5e-41 171.8 89 91.0
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 1.5e-39 166.4 89 89.9
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 1.5e-39 166.4 89 89.9
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 1.5e-39 166.4 89 89.9
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 1.5e-39 166.4 89 89.9
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 8.8e-37 157.1 81 90.1
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 1.5e-36 156.4 95 77.9
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 2.0e-36 156.0 89 83.1
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 2.0e-36 156.0 89 83.1
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 1.3e-35 153.3 95 76.8
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 2.8e-35 152.1 78 89.7
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 8.3e-35 150.6 84 82.1
SHI36137 Sapria himalayana HOM05D000743 ORTHO05D000580 1.4e-34 149.8 99 74.7
SHI50746 Sapria himalayana HOM05D001560 ORTHO05D003613 1.4e-34 149.8 102 74.5
arahy.Tifrunner.gnm1.ann1.7G246T Arachis hypogaea HOM05D001560 ORTHO05D003613 1.8e-34 149.4 77 89.6
arahy.Tifrunner.gnm1.ann1.JTWL6Q Arachis hypogaea HOM05D001560 ORTHO05D003613 1.8e-34 149.4 77 89.6
SHI36372 Sapria himalayana HOM05D001560 ORTHO05D003613 1.8e-34 149.4 102 74.5
SHI37087 Sapria himalayana HOM05D001560 ORTHO05D003613 1.8e-34 149.4 102 74.5
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 1.8e-34 149.4 102 74.5
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 4.1e-34 148.3 102 75.5
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 4.1e-34 148.3 102 75.5
FvH4_2g28480 Fragaria vesca HOM05D001560 ORTHO05D003613 5.4e-34 147.9 78 87.2
Hma1.2p1_0079F.1_g041900 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 9.1e-34 147.1 78 87.2
SHI35978 Sapria himalayana HOM05D000743 ORTHO05D000580 2.7e-33 145.6 89 80.9
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 3.5e-33 145.2 84 79.8
Nn4g26009 Nelumbo nucifera HOM05D001560 ORTHO05D003613 3.5e-33 145.2 84 79.8
Ah.01g011700 Amaranthus hybridus HOM05D001560 ORTHO05D003613 4.5e-33 144.8 84 79.8
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 4.5e-33 144.8 84 79.8
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 4.5e-33 144.8 84 79.8
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 4.5e-33 144.8 84 79.8
Oeu051780.2 Olea europaea HOM05D001560 ORTHO05D003613 4.5e-33 144.8 86 77.9
SHI35290 Sapria himalayana HOM05D000743 ORTHO05D000580 4.5e-33 144.8 99 72.7
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 5.9e-33 144.4 78 85.9
RhsimMtG0005500 Rhododendron simsii HOM05D001560 ORTHO05D003613 5.9e-33 144.4 84 79.8
SHI37854 Sapria himalayana HOM05D001560 ORTHO05D003613 7.7e-33 144.1 109 69.7
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 1.0e-32 143.7 84 79.8
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 1.0e-32 143.7 84 79.8
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 1.0e-32 143.7 84 78.6
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 1.0e-32 143.7 102 71.6
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-32 142.9 99 71.7
SHI44984 Sapria himalayana HOM05D001560 ORTHO05D003613 2.9e-32 142.1 99 71.7
HanXRQChr08g0236201 Helianthus annuus HOM05D001560 ORTHO05D003613 5.0e-32 141.4 84 77.4
SHI37136 Sapria himalayana HOM05D001560 ORTHO05D003613 5.0e-32 141.4 99 71.7
SHI35235 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-31 139.8 102 70.6
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 2.5e-31 139.0 84 77.4
Lsat_1_v5_gn_5_16600 Lactuca sativa HOM05D001560 ORTHO05D003613 5.5e-31 137.9 78 80.8
AL3G44410 Arabidopsis lyrata HOM05D001560 ORTHO05D003613 1.2e-30 136.7 84 75.0
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 1.2e-30 136.7 84 75.0
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.2e-30 136.7 78 82.1
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.2e-30 136.7 78 82.1
Hund29341 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.2e-30 136.7 78 82.1
BolSC28t60433H Brassica oleracea HOM05D001560 ORTHO05D003613 1.6e-30 136.3 78 80.8
BraSC77t46636Z Brassica rapa HOM05D001560 ORTHO05D003613 1.6e-30 136.3 78 80.8
SHI43452 Sapria himalayana HOM05D001560 ORTHO05D003613 1.6e-30 136.3 98 70.4
Nitab4.5_0002739g0100 Nicotiana tabacum HOM05D001560 ORTHO05D003613 2.8e-30 135.6 77 83.1
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 4.7e-30 134.8 78 78.2
ClCG10G004710 Citrullus lanatus HOM05D001560 ORTHO05D003613 4.7e-30 134.8 78 78.2
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 4.7e-30 134.8 72 84.7
HanXRQChr10g0297191 Helianthus annuus HOM05D001560 ORTHO05D003613 4.7e-30 134.8 84 75.0
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 8.0e-30 134.0 72 84.7
CDE02G0303 Ceratophyllum demersum HOM05D001560 ORTHO05D003613 1.0e-29 133.7 72 84.7
Nitab4.5_0000307g0340 Nicotiana tabacum HOM05D001560 ORTHO05D003613 4.0e-29 131.7 78 78.2
SEGI_16710 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 5.2e-29 131.3 83 75.9
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 2.0e-28 129.4 78 76.9
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-27 125.9 72 80.6
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-27 125.9 72 80.6
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-27 125.9 72 80.6
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-27 125.9 72 80.6
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-27 125.9 72 80.6
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-27 125.9 72 80.6
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-27 125.9 72 80.6
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 1.8e-26 122.9 75 77.3
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.4e-26 122.5 72 77.8
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 5.4e-26 121.3 81 72.8
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 5.4e-26 121.3 75 76.0
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 7.0e-26 120.9 78 71.8
SHI35186 Sapria himalayana HOM05D000743 ORTHO05D000580 2.7e-25 119.0 87 66.7
SHI43894 Sapria himalayana HOM05D001560 ORTHO05D003613 7.8e-25 117.5 78 73.1
SHI34615 Sapria himalayana HOM05D000743 ORTHO05D000580 8.6e-24 114.0 73 74.0
COL.COLO4_04089 Corchorus olitorius HOM05D001560 ORTHO05D003613 1.1e-23 113.6 66 75.8
Solyc09g057830.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.9e-23 112.8 78 65.4
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 2.8e-22 109.0 65 75.4
Nitab4.5_0008337g0090 Nicotiana tabacum HOM05D001560 ORTHO05D003613 2.8e-22 109.0 65 78.5
Solyc09g056080.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 3.6e-22 108.6 78 66.7
Nitab4.5_0001152g1040 Nicotiana tabacum HOM05D001560 ORTHO05D003613 2.3e-21 105.9 77 68.8
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 2.6e-20 102.4 102 56.9
Solyc09g056310.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 9.2e-18 94.0 78 62.8
SHI37067 Sapria himalayana HOM05D001560 ORTHO05D010994 1.2e-17 93.6 63 69.8
SHI44330 Sapria himalayana HOM05D001560 ORTHO05D003613 3.5e-17 92.0 65 69.2
SHI36973 Sapria himalayana HOM05D001560 ORTHO05D003613 5.9e-17 91.3 65 69.2
SHI36624 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-16 89.7 65 67.7
SHI50439 Sapria himalayana HOM05D001560 ORTHO05D010994 8.6e-16 87.4 66 68.2
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 1.5e-15 86.7 65 66.2
SHI39078 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-15 86.7 65 66.2
SHI37166 Sapria himalayana HOM05D001560 ORTHO05D003613 1.9e-15 86.3 65 66.2
GSVIVG01031611001 Vitis vinifera HOM05D001560 ORTHO05D003613 1.9e-15 86.3 51 76.5
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.6e-14 83.2 45 75.6
SHI40903 Sapria himalayana HOM05D001560 ORTHO05D003613 2.1e-14 82.8 65 64.6
Sed0003843 Sechium edule HOM05D001560 ORTHO05D003613 2.1e-14 82.8 47 85.1
SHI35454 Sapria himalayana HOM05D000743 ORTHO05D000580 1.1e-13 80.5 51 70.6
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 1.8e-13 79.7 45 80.0
SHI38843 Sapria himalayana HOM05D001560 ORTHO05D003613 4.0e-13 78.6 96 51.0
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.7e-11 73.2 47 74.5
Nitab4.5_0000844g0250 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.4e-10 70.1 37 83.8
Sopen12g024770 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-10 69.3 44 77.3
Solyc05g018790.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 9.2e-10 67.4 46 71.7
AagrBONN_evm.TU.Sc2ySwM_344.1486 Anthoceros agrestis HOM05D001560 ORTHO05D003613 1.2e-09 67.0 86 32.6
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 1.6e-09 66.6 33 84.8
TWI74G0358 Tripterygium wilfordii HOM05D003614 ORTHO05D004156 1.3e-08 63.5 125 35.2
RcHm_v2.0_Chr1g0323821 Rosa chinensis HOM05D003614 ORTHO05D004156 3.9e-08 62.0 80 41.2
MELO3C008840.2 Cucumis melo HOM05D003614 ORTHO05D004156 5.0e-08 61.6 125 32.8
FvH4_7g02870 Fragaria vesca HOM05D003614 ORTHO05D004156 5.0e-08 61.6 80 41.2
FAN03G2482 Fragaria x ananassa HOM05D003614 ORTHO05D004156 5.0e-08 61.6 80 41.2
FAN06G2474 Fragaria x ananassa HOM05D003614 ORTHO05D004156 5.0e-08 61.6 80 41.2
Pp3c2_1860 Physcomitrium patens HOM05D001560 ORTHO05D003613 8.6e-08 60.8 87 35.6
CsaV3_4G012020 Cucumis sativus L. HOM05D003614 ORTHO05D004156 1.1e-07 60.5 87 36.8
Gohir.A09G213532 Gossypium hirsutum HOM05D003614 ORTHO05D004156 1.5e-07 60.1 121 37.2
ClCG04G005530 Citrullus lanatus HOM05D003614 ORTHO05D004156 1.9e-07 59.7 129 30.2
Peaxi162Scf00122g00065 Petunia axillaris HOM05D001560 ORTHO05D003613 1.9e-07 59.7 39 64.1
ATR0691G002 Amborella trichopoda HOM05D003614 ORTHO05D004156 2.5e-07 59.3 123 35.8
Haze_25257 Corylus avellana HOM05D003614 ORTHO05D004156 2.5e-07 59.3 89 39.3
PGR119G0394 Punica granatum HOM05D003614 ORTHO05D004156 3.3e-07 58.9 77 42.9
Ah.01g011760 Amaranthus hybridus HOM05D001560 ORTHO05D003613 4.3e-07 58.5 34 67.6
Manes.09G100100 Manihot esculenta HOM05D003614 ORTHO05D004156 4.3e-07 58.5 80 38.8
SEGI_08289 Sequoiadendron giganteum HOM05D003614 ORTHO05D004156 5.6e-07 58.2 119 30.3
SEGI_12312 Sequoiadendron giganteum HOM05D003614 ORTHO05D004156 5.6e-07 58.2 119 30.3
Solyc11g030880.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 5.6e-07 58.2 50 60.0
Aqoxy6G00302 Aquilegia oxysepala HOM05D003614 ORTHO05D004156 7.3e-07 57.8 123 35.0
Cfa002904 Carpinus fangiana HOM05D003614 ORTHO05D004156 7.3e-07 57.8 89 39.3
Pp3c15_3410 Physcomitrium patens HOM05D003614 ORTHO05D004156 9.5e-07 57.4 86 33.7
Prupe.2G034000 Prunus persica HOM05D003614 ORTHO05D004156 9.5e-07 57.4 80 36.2
PSO017G1060 Papaver somniferum HOM05D003614 ORTHO05D004156 1.6e-06 56.6 80 38.8
arahy.Tifrunner.gnm1.ann1.8A3W3K Arachis hypogaea HOM05D003614 ORTHO05D004156 2.8e-06 55.8 123 31.7
CANSAT11G2476 Cannabis sativa HOM05D003614 ORTHO05D004156 2.8e-06 55.8 84 41.7
SHI36585 Sapria himalayana HOM05D001560 ORTHO05D003613 2.8e-06 55.8 31 77.4
MSTRG.10382 Avicennia marina HOM05D003614 ORTHO05D004156 3.6e-06 55.5 77 39.0
Gohir.D09G211130 Gossypium hirsutum HOM05D003614 ORTHO05D004156 3.6e-06 55.5 121 34.7
Rhsim10G0133500 Rhododendron simsii HOM05D003614 ORTHO05D004156 3.6e-06 55.5 80 38.8
SHI13956 Sapria himalayana HOM05D003614 ORTHO05D004156 4.7e-06 55.1 76 40.8
vmacro12792 Vaccinium macrocarpon HOM05D003614 ORTHO05D004156 4.7e-06 55.1 80 37.5
AagrBONN_evm.TU.Sc2ySwM_344.5534 Anthoceros agrestis HOM05D003302 ORTHO05D003785 6.2e-06 54.7 73 34.2
DCAR_014331 Daucus carota HOM05D003614 ORTHO05D004156 6.2e-06 54.7 80 37.5
Dinv07113 Davidia involucrata HOM05D003614 ORTHO05D004156 6.2e-06 54.7 80 37.5
PSO017G0346 Papaver somniferum HOM05D003614 ORTHO05D004156 8.1e-06 54.3 80 37.5


User provided reference genes

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