Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33657 Trifolium pratense HOM05D008056 ORTHO05D009804 7.5e-39 163.3 79 100.0
Medtr3g491850 Medicago truncatula HOM05D008056 ORTHO05D009804 1.7e-30 135.6 78 84.6
Psat5g075840 Pisum sativum HOM05D008056 ORTHO05D009804 1.3e-27 125.9 78 78.2
Glyma.04G233800 Glycine max HOM05D008056 ORTHO05D009804 8.1e-25 116.7 79 74.7
Lalb_Chr23g0271651 Lupinus albus HOM05D008056 ORTHO05D009804 5.8e-23 110.5 81 74.1
Glyma.06G131000 Glycine max HOM05D008056 ORTHO05D009804 8.4e-22 106.7 79 68.4
arahy.Tifrunner.gnm1.ann1.7U68N5 Arachis hypogaea HOM05D008056 ORTHO05D009804 4.6e-20 100.9 76 67.1
Phvul.009G050700 Phaseolus vulgaris HOM05D008056 ORTHO05D009804 1.0e-19 99.8 79 59.5
arahy.Tifrunner.gnm1.ann1.I0C4BN Arachis hypogaea HOM05D008056 ORTHO05D009804 2.3e-19 98.6 76 65.8
CiPaw.05G198700 Carya illinoinensis HOM05D008056 ORTHO05D009804 4.2e-13 77.8 80 52.5
TWI39G0847 Tripterygium wilfordii HOM05D008056 ORTHO05D009804 1.6e-12 75.9 77 53.2
Actinidia34234 Actinidia chinensis HOM05D008056 ORTHO05D009804 5.1e-11 70.9 76 52.6
Atru.chr12.2248 Acer truncatum HOM05D008056 ORTHO05D009804 2.5e-10 68.6 84 50.0
Haze_00233 Corylus avellana HOM05D008056 ORTHO05D009804 2.5e-10 68.6 79 46.8
Actinidia08668 Actinidia chinensis HOM05D008056 ORTHO05D009804 3.3e-10 68.2 76 51.3
Hma1.2p1_0591F.1_g185220 Hydrangea macrophylla HOM05D008056 ORTHO05D009804 5.6e-10 67.4 76 48.7
GSVIVG01038573001 Vitis vinifera HOM05D008056 ORTHO05D009804 3.7e-09 64.7 72 50.0
Potri.015G010500 Populus trichocarpa HOM05D008056 ORTHO05D009804 1.1e-08 63.2 71 57.7
Prupe.2G313800 Prunus persica HOM05D015219 ORTHO05D009804 1.1e-08 63.2 73 47.9
CiPaw.06G044900 Carya illinoinensis HOM05D008056 ORTHO05D009804 1.4e-08 62.8 79 50.6
Ciclev10023143m.g Citrus clementina HOM05D008056 ORTHO05D009804 1.4e-08 62.8 75 53.3
Potri.012G017400 Populus trichocarpa HOM05D008056 ORTHO05D009804 1.4e-08 62.8 77 55.8
Rhsim03G0210900 Rhododendron simsii HOM05D008056 ORTHO05D009804 3.1e-08 61.6 79 48.1
Dinv35348 Davidia involucrata HOM05D008056 ORTHO05D009804 9.0e-08 60.1 67 49.3
vmacro06398 Vaccinium macrocarpon HOM05D008056 ORTHO05D009804 9.0e-08 60.1 82 47.6
MD01G1223300 Malus domestica HOM05D015219 ORTHO05D009804 2.6e-07 58.5 77 48.1
Ciclev10023135m.g Citrus clementina HOM05D008056 ORTHO05D009804 3.4e-07 58.2 75 48.0
GSVIVG01029691001 Vitis vinifera HOM05D008056 ORTHO05D009804 3.4e-07 58.2 71 52.1
TAR629G0325 Trochodendron aralioides HOM05D008056 ORTHO05D009804 4.5e-07 57.8 78 47.4
Hma1.2p1_2994F.1_g331390 Hydrangea macrophylla HOM05D008056 ORTHO05D009804 5.8e-07 57.4 78 47.4
Manes.05G191400 Manihot esculenta HOM05D008056 ORTHO05D009804 5.8e-07 57.4 78 50.0
Hund21013 Selenicereus undatus HOM05D008056 ORTHO05D009804 7.6e-07 57.0 60 48.3
DCAR_008952 Daucus carota HOM05D008056 ORTHO05D009804 1.7e-06 55.8 80 48.8
Duzib205G0818 Durio zibethinus HOM05D015444 ORTHO05D009804 3.8e-06 54.7 75 42.7


User provided reference genes

Program Settings