Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33575 Trifolium pratense HOM05D003057 ORTHO05D003904 6.2e-79 297.4 146 100.0
TPR.G1746 Trifolium pratense HOM05D003057 ORTHO05D003904 4.2e-43 178.3 123 65.9
COL.COLO4_10110 Corchorus olitorius HOM05D003057 ORTHO05D003904 7.4e-40 167.5 122 65.6
TPR.G14797 Trifolium pratense HOM05D003057 ORTHO05D003904 2.2e-39 166.0 123 69.1
COL.COLO4_37503 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.1e-38 163.7 123 62.6
AL6G26450 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 1.3e-36 156.8 123 59.3
Lj4g0012344 Lotus japonicus HOM05D003057 ORTHO05D003904 3.8e-36 155.2 120 58.3
Lj2g0002985 Lotus japonicus HOM05D003057 ORTHO05D003904 6.5e-36 154.5 120 58.3
COL.COLO4_20032 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.9e-35 152.9 138 54.3
Hma1.2p1_0622F.1_g190920 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 1.2e-34 150.2 123 56.9
BcaC08g45994 Brassica carinata HOM05D003057 ORTHO05D003904 3.6e-34 148.7 123 57.7
Rhsim03G0157600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.0e-33 147.1 121 55.4
Rhsim09G0063100 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.8e-33 146.4 121 54.5
SGA_v2.0_scaffold73G24256 Striga asiatica HOM05D003057 ORTHO05D003904 1.8e-33 146.4 121 55.4
Rhsim10G0170800 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.5e-32 143.3 122 54.1
BcaC01g02975 Brassica carinata HOM05D003057 ORTHO05D003904 1.9e-32 142.9 123 53.7
Rhsim01G0115600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.9e-32 142.9 124 54.0
RhsimUnG0046200 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.9e-32 142.9 122 53.3
RhsimUnG0134200 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.5e-32 142.5 122 54.1
COL.COLO4_37623 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.3e-32 142.1 107 61.7
PSO198G0152 Papaver somniferum HOM05D003057 ORTHO05D003904 3.3e-32 142.1 123 57.7
Rhsim11G0020100 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.3e-32 142.1 123 54.5
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.3e-32 141.7 127 53.5
RhsimUnG0227600 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.3e-32 141.7 122 54.1
Rhsim06G0137900 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.3e-31 140.2 123 52.8
COL.COLO4_24961 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.8e-31 139.0 123 55.3
COL.COLO4_27567 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.8e-31 138.3 125 54.4
PSO761G0317 Papaver somniferum HOM05D003057 ORTHO05D003904 4.8e-31 138.3 127 53.5
Rhsim02G0047600 Rhododendron simsii HOM05D003057 ORTHO05D003904 6.3e-31 137.9 121 52.1
TPR.G9017 Trifolium pratense HOM05D003057 ORTHO05D003904 6.3e-31 137.9 111 58.6
Lj5g0003986 Lotus japonicus HOM05D003057 ORTHO05D003904 8.2e-31 137.5 98 64.3
ECA248G1006 Erigeron canadensis HOM05D003057 ORTHO05D003904 1.1e-30 137.1 123 52.8
PSO675G7321 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-30 137.1 125 50.4
Rhsim08G0118100 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.1e-30 137.1 121 52.9
Rhsim11G0159700 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.1e-30 137.1 121 52.9
Rhsim12G0027300 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.1e-30 137.1 121 52.1
RhsimUnG0099900 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.1e-30 137.1 121 52.9
PSO170G6652 Papaver somniferum HOM05D003057 ORTHO05D003904 1.4e-30 136.7 125 50.4
Rhsim05G0119600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.8e-30 136.3 121 52.9
ECA234G4294 Erigeron canadensis HOM05D003057 ORTHO05D003904 3.1e-30 135.6 123 52.0
Rhsim07G0167300 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.1e-30 135.6 122 51.6
SGA_v2.0_scaffold17G08157 Striga asiatica HOM05D003057 ORTHO05D003904 3.1e-30 135.6 121 52.1
COL.COLO4_07828 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.1e-30 135.2 123 53.7
COL.COLO4_37543 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.3e-30 134.8 123 54.5
COL.COLO4_20007 Corchorus olitorius HOM05D003057 ORTHO05D003904 6.9e-30 134.4 123 50.4
CAN.G523.32 Capsicum annuum HOM05D002887 ORTHO05D003159 1.5e-29 133.3 100 59.0
Rhsim11G0002500 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.0e-29 132.9 114 52.6
COL.COLO4_08929 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.6e-29 132.5 123 49.6
Hma1.2p1_1282F.1_g272710 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 2.6e-29 132.5 123 51.2
Rhsim02G0188200 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.4e-29 132.1 109 55.0
COL.COLO4_21501 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.9e-29 131.3 83 71.1
PSO170G6610 Papaver somniferum HOM05D003057 ORTHO05D003904 1.0e-28 130.6 123 50.4
PSO210G2781 Papaver somniferum HOM05D003057 ORTHO05D003904 1.0e-28 130.6 123 49.6
PSO339G6256 Papaver somniferum HOM05D003057 ORTHO05D003904 1.7e-28 129.8 123 49.6
PSO151G0074 Papaver somniferum HOM05D003057 ORTHO05D003904 2.9e-28 129.0 130 43.8
PSO357G0652 Papaver somniferum HOM05D003057 ORTHO05D003904 3.8e-28 128.6 123 49.6
PSO724G1375 Papaver somniferum HOM05D003057 ORTHO05D003904 5.0e-28 128.3 123 48.8
Rhsim02G0188400 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.0e-28 128.3 109 53.2
PSO339G3646 Papaver somniferum HOM05D003057 ORTHO05D003904 6.5e-28 127.9 130 43.8
PSO832G2073 Papaver somniferum HOM05D003057 ORTHO05D003904 6.5e-28 127.9 123 48.8
PSO675G8645 Papaver somniferum HOM05D003057 ORTHO05D003904 8.5e-28 127.5 130 43.1
Rhsim01G0178000 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.4e-27 126.7 116 52.6
PSO017G2586 Papaver somniferum HOM05D003057 ORTHO05D003904 1.9e-27 126.3 130 42.3
PSO017G6481 Papaver somniferum HOM05D003057 ORTHO05D003904 1.9e-27 126.3 123 48.8
PSO339G3716 Papaver somniferum HOM05D003057 ORTHO05D003904 1.9e-27 126.3 123 46.3
PSO013G0378 Papaver somniferum HOM05D003057 ORTHO05D003904 4.2e-27 125.2 128 44.5
PSO063G0536 Papaver somniferum HOM05D003057 ORTHO05D003904 4.2e-27 125.2 143 45.5
PSO170G5304 Papaver somniferum HOM05D003057 ORTHO05D003904 4.2e-27 125.2 123 48.0
PSO832G3916 Papaver somniferum HOM05D003057 ORTHO05D003904 9.4e-27 124.0 121 51.2
PSO339G0160 Papaver somniferum HOM05D003057 ORTHO05D003904 1.2e-26 123.6 121 51.2
PSO357G0662 Papaver somniferum HOM05D003057 ORTHO05D003904 1.6e-26 123.2 143 45.5
PSO761G0015 Papaver somniferum HOM05D003057 ORTHO05D003904 1.6e-26 123.2 143 45.5
PSO210G4431 Papaver somniferum HOM05D003057 ORTHO05D003904 2.1e-26 122.9 123 46.3
Rhsim09G0038900 Rhododendron simsii HOM05D009719 ORTHO05D003904 2.7e-26 122.5 104 54.8
PSO017G5767 Papaver somniferum HOM05D003057 ORTHO05D003904 3.6e-26 122.1 123 47.2
Rhsim08G0101000 Rhododendron simsii HOM05D003057 ORTHO05D003904 7.9e-26 120.9 105 50.5
BcaC04g21929 Brassica carinata HOM05D003057 ORTHO05D003904 1.8e-25 119.8 123 50.4
PSO017G7296 Papaver somniferum HOM05D003057 ORTHO05D003904 2.3e-25 119.4 143 44.1
SGA_v2.0_scaffold16G07775 Striga asiatica HOM05D003057 ORTHO05D003904 5.1e-25 118.2 101 53.5
PSO384G2563 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-23 113.6 123 44.7
PSO832G4354 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-23 113.6 108 47.2
TPR.G13641 Trifolium pratense HOM05D003057 ORTHO05D003904 3.7e-23 112.1 93 52.7
Os06g0523701 Oryza sativa ssp. japonica HOM05D003057 ORTHO05D003904 6.3e-23 111.3 109 45.9
Ah.04g158790 Amaranthus hybridus HOM05D003057 ORTHO05D003904 9.1e-22 107.5 121 39.7
Ah.07g202550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 9.1e-22 107.5 121 39.7
PSO170G1938 Papaver somniferum HOM05D003057 ORTHO05D003904 9.1e-22 107.5 114 44.7
Ah.07g196960 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-21 107.1 121 39.7
Ah.06g184390 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.0e-21 106.3 121 39.7
PSO384G2001 Papaver somniferum HOM05D003057 ORTHO05D003904 2.6e-21 105.9 123 43.1
Ah.03g142690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.7e-21 104.4 121 38.8
Ah.13g069490 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.7e-21 104.4 121 38.8
Ah.06g187260 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.2e-20 102.8 124 37.9
Ah.10g026650 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.8e-20 102.1 124 38.7
COL.COLO4_37789 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.8e-20 102.1 68 70.6
Ah.14g084280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.5e-20 100.9 124 37.9
Ah.01g017940 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-19 100.5 121 37.2
Ah.01g013430 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.4e-19 100.1 121 38.0
Ah.03g145610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.4e-19 100.1 124 37.9
Ah.07g202070 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.4e-19 100.1 127 37.0
Ah.04g155590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.9e-19 99.8 120 36.7
Ah.13g068770 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.9e-19 99.8 124 37.9
AL5G22340 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 1.9e-19 99.8 123 44.7
Ah.07g201230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.5e-19 99.4 124 37.1
Ah.15g097480 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.5e-19 99.4 124 37.9
PSO170G6344 Papaver somniferum HOM05D003057 ORTHO05D003904 3.2e-19 99.0 114 42.1
PSO384G4427 Papaver somniferum HOM05D003057 ORTHO05D003904 3.2e-19 99.0 114 42.1
Ah.16g106200 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.5e-19 98.2 123 38.2
Ah.03g140530 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-18 97.1 124 37.1
COL.COLO4_35241 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.1e-18 96.3 89 50.6
TPR.G14789 Trifolium pratense HOM05D003057 ORTHO05D003904 3.6e-18 95.5 55 83.6
PSO339G0276 Papaver somniferum HOM05D003057 ORTHO05D003904 2.3e-17 92.8 68 58.8
PSO384G0803 Papaver somniferum HOM05D003057 ORTHO05D003904 3.9e-17 92.0 95 44.2
TWI15G0994 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 3.9e-17 92.0 83 50.6
Ah.01g023980 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.7e-17 91.3 123 35.8
Ah.04g162690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.6e-16 89.4 123 35.0
Ah.04g164590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.6e-16 89.4 123 35.0
Ah.06g181920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.6e-16 89.4 123 35.0
Ah.11g045640 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.6e-16 89.4 123 35.0
Ah.05g175220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.3e-16 89.0 120 34.2
Ah.06g181680 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.4e-16 88.6 123 35.0
Ah.11g046560 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.4e-16 88.6 123 35.0
Ah.10g032920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.4e-16 87.8 123 34.1
TWI31G1500 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 7.4e-16 87.8 85 48.2
Ah.16g103350 Amaranthus hybridus HOM05D003057 ORTHO05D003904 9.7e-16 87.4 123 34.1
Ah.06g182610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-15 87.0 118 35.6
Ah.13g067120 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.2e-15 86.3 118 36.4
Ah.11g041830 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.8e-15 85.9 118 36.4
TPR.G34813 Trifolium pratense HOM05D003057 ORTHO05D003904 3.7e-15 85.5 121 38.0
Rhsim01G0125100 Rhododendron simsii HOM05D003057 ORTHO05D003904 6.3e-15 84.7 84 46.4
Ah.03g144340 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.2e-15 84.3 118 35.6
QL01p049124 Quercus lobata HOM05D003057 ORTHO05D003904 1.4e-14 83.6 84 47.6
Ah.03g143550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.1e-14 82.0 123 32.5
COL.COLO4_31045 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.1e-14 82.0 55 61.8
QL05p017993 Quercus lobata HOM05D003057 ORTHO05D003904 4.1e-14 82.0 68 52.9
Ah.10g032220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 9.1e-14 80.9 123 30.9
Ah.07g201280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.0e-12 77.4 113 31.9
TPR.G38366 Trifolium pratense HOM05D003057 ORTHO05D003904 1.3e-12 77.0 70 50.0
Ah.01g002160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.2e-12 76.3 123 30.1
Ah.06g181160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.9e-12 75.9 113 31.9
Ah.07g206230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.0e-12 75.1 123 29.3
PSO017G5295 Papaver somniferum HOM05D003057 ORTHO05D003904 3.2e-11 72.4 88 38.6
PSO170G5731 Papaver somniferum HOM05D003057 ORTHO05D003904 9.4e-11 70.9 55 56.4
Duzib205G1595 Durio zibethinus HOM05D003057 ORTHO05D003904 1.0e-09 67.4 98 37.8
PSO478G2060 Papaver somniferum HOM05D003057 ORTHO05D003904 4.0e-09 65.5 56 51.8
PSO017G3866 Papaver somniferum HOM05D003057 ORTHO05D003904 5.2e-09 65.1 55 52.7
PSO357G0194 Papaver somniferum HOM05D003057 ORTHO05D003904 8.8e-09 64.3 65 46.2
AUR62022531 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.4e-08 62.0 104 28.8
AUR62026174 Chenopodium quinoa HOM05D003057 ORTHO05D003904 1.1e-06 57.4 68 38.2
PSO063G5105 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-06 57.4 50 50.0


User provided reference genes

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