Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 6.5e-128 460.7 224 100.0
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 8.9e-61 237.7 224 55.4
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 4.3e-55 218.8 225 54.7
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 7.3e-55 218.0 221 51.1
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 6.4e-51 204.9 227 51.1
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.5e-47 193.7 223 48.9
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 5.6e-47 191.8 218 45.0
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 8.1e-46 188.0 304 38.8
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 1.1e-45 187.6 219 46.6
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 4.0e-45 185.7 222 46.4
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 2.0e-44 183.3 198 52.0
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 4.2e-42 175.6 225 44.9
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 7.1e-42 174.9 225 43.1
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 9.3e-42 174.5 222 44.1
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 3.5e-41 172.6 219 45.2
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 7.9e-41 171.4 221 41.2
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.0e-40 171.0 222 43.2
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 5.1e-40 168.7 224 42.9
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 6.6e-40 168.3 222 42.3
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 6.6e-40 168.3 222 42.3
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 2.5e-39 166.4 221 41.6
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.5e-39 166.4 221 39.8
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 3.3e-39 166.0 224 41.5
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 3.3e-39 166.0 228 44.7
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 9.6e-39 164.5 222 41.9
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 2.1e-38 163.3 222 41.4
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.8e-38 162.9 223 40.8
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 4.8e-38 162.2 227 42.7
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 4.8e-38 162.2 227 42.7
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 6.2e-38 161.8 222 40.5
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 6.2e-38 161.8 222 41.4
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 1.4e-37 160.6 221 39.8
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.1e-37 159.5 222 43.2
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 3.1e-37 159.5 223 40.4
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.0e-37 159.1 220 39.5
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.0e-37 159.1 220 39.5
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 1.2e-36 157.5 228 42.5
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 1.2e-36 157.5 228 42.5
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-36 157.1 222 40.1
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 1.5e-36 157.1 220 43.2
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 2.6e-36 156.4 227 40.1
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 3.4e-36 156.0 228 43.4
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 5.8e-36 155.2 223 42.2
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.6e-36 154.8 222 43.2
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 7.6e-36 154.8 221 40.3
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 1.3e-35 154.1 222 38.3
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 4.9e-35 152.1 201 43.3
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 4.9e-35 152.1 222 38.3
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 4.9e-35 152.1 178 49.4
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 6.4e-35 151.8 222 39.2
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-34 151.0 228 41.7
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 1.4e-34 150.6 227 41.4
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 1.9e-34 150.2 228 39.0
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.2e-34 149.1 222 42.3
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.1e-33 146.7 222 41.9
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 4.6e-33 145.6 232 37.5
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 6.0e-33 145.2 225 39.6
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.0e-32 144.4 222 41.0
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 1.3e-32 144.1 225 40.0
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.8e-32 143.7 222 41.9
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 3.0e-32 142.9 222 39.2
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 6.7e-32 141.7 194 41.2
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-31 141.0 223 41.3
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.5e-31 139.8 221 39.8
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.6e-31 138.7 206 41.7
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.8e-30 136.3 228 38.6
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.7e-30 136.0 221 39.8
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 6.2e-30 135.2 224 37.1
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 6.2e-30 135.2 224 37.1
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 6.2e-30 135.2 224 37.1
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.1e-30 134.8 206 41.3
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 3.1e-29 132.9 135 55.6
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.5e-28 130.6 223 36.3
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 3.8e-27 125.9 222 35.1
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 4.9e-27 125.6 146 43.8
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-26 124.0 228 37.7
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.5e-26 123.2 172 41.9
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 7.1e-26 121.7 139 49.6
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 2.7e-25 119.8 222 36.9
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 3.5e-25 119.4 122 52.5
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 6.0e-25 118.6 231 32.5
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 7.9e-25 118.2 221 37.6
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.9e-24 115.9 148 43.2
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 6.7e-24 115.2 160 40.6
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 8.7e-24 114.8 167 41.3
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.5e-23 114.0 224 33.5
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 3.3e-23 112.8 146 41.1
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 3.3e-23 112.8 230 33.9
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.8e-22 109.8 221 36.2
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 4.8e-22 109.0 208 37.0
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 2.4e-21 106.7 219 32.9
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 3.1e-21 106.3 119 47.9
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-20 104.4 134 42.5
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-20 104.4 134 42.5
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 1.7e-19 100.5 188 36.7
TPR.G33490 Trifolium pratense HOM05D005276 ORTHO05D006813 2.2e-19 100.1 69 69.6
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 5.5e-18 95.5 197 37.1
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 9.3e-18 94.7 109 44.0
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.7e-17 93.2 231 30.3
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 3.0e-16 89.7 184 33.7
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.9e-16 89.4 222 31.1
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.9e-16 89.4 222 31.1
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 1.1e-15 87.8 141 41.8
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 4.3e-15 85.9 191 33.5
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.7e-15 85.5 222 30.2
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 7.4e-15 85.1 229 28.8
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 9.7e-15 84.7 231 28.1
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 2.2e-14 83.6 138 37.0
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 3.7e-14 82.8 229 28.4
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.8e-14 82.4 133 39.1
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 2.4e-13 80.1 202 30.7
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 3.4e-12 76.3 223 28.7
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 1.3e-11 74.3 128 33.6
TPR.G33511 Trifolium pratense HOM05D005276 ORTHO05D006813 1.4e-10 70.9 72 54.2
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 4.2e-10 69.3 81 44.4
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.2e-10 69.3 80 43.8
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.5e-10 68.9 95 38.9
Psat1g051400 Pisum sativum HOM05D005276 ORTHO05D006813 7.2e-10 68.6 84 44.0
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 9.4e-10 68.2 114 38.6
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.4e-10 68.2 151 37.7
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 2.1e-09 67.0 113 35.4
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 2.3e-08 63.5 106 35.8
RcHm_v2.0_Chr5g0076541 Rosa chinensis HOM05D005276 ORTHO05D006813 2.3e-08 63.5 74 45.9
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 3.9e-08 62.8 200 28.5
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 6.7e-08 62.0 84 36.9
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.8e-08 61.6 114 32.5
Dinv42430 Davidia involucrata HOM05D005276 ORTHO05D006813 5.7e-07 58.9 63 46.0
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.7e-07 58.9 121 37.2
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 6.3e-06 55.5 89 37.1


User provided reference genes

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