Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33540 Trifolium pratense HOM05D000254 ORTHO05D000165 1.7e-45 185.7 96 100.0
TPR.G18474 Trifolium pratense HOM05D000254 ORTHO05D000165 2.5e-20 102.1 63 85.7
TPR.G17479 Trifolium pratense HOM05D003135 ORTHO05D000165 3.6e-19 98.2 57 89.5
Lj2g0011354 Lotus japonicus HOM05D000254 ORTHO05D000165 3.1e-18 95.1 63 81.0
Lj5g0023700 Lotus japonicus HOM05D000254 ORTHO05D000165 4.4e-17 91.3 63 79.4
TPR.G39588 Trifolium pratense HOM05D000254 ORTHO05D000165 4.4e-17 91.3 63 81.0
Medtr4g109010 Medicago truncatula HOM05D000041 ORTHO05D000061 3.7e-16 88.2 63 76.2
LjContig00141g0020943 Lotus japonicus HOM05D000254 ORTHO05D000165 6.4e-16 87.4 59 81.4
Lj3g0027175 Lotus japonicus HOM05D000254 ORTHO05D000165 1.9e-15 85.9 54 83.3
Lj3g0010857 Lotus japonicus HOM05D000254 ORTHO05D000165 3.2e-15 85.1 60 78.3
Lj6g0003945 Lotus japonicus HOM05D000254 ORTHO05D000165 7.1e-15 84.0 59 79.7
TPR.G35778 Trifolium pratense HOM05D000254 ORTHO05D000165 7.1e-15 84.0 50 88.0
Glyma.17G230400 Glycine max HOM05D000254 ORTHO05D000165 9.2e-15 83.6 63 71.4
LjContig00141g0001801 Lotus japonicus HOM05D000254 ORTHO05D000165 9.2e-15 83.6 60 78.3
Glyma.01G024100 Glycine max HOM05D000254 ORTHO05D000165 1.6e-14 82.8 63 71.4
Glyma.02G075400 Glycine max HOM05D000254 ORTHO05D000165 1.6e-14 82.8 63 71.4
Glyma.02G163400 Glycine max HOM05D000254 ORTHO05D000165 1.6e-14 82.8 63 71.4
Glyma.03G059500 Glycine max HOM05D000254 ORTHO05D000165 1.6e-14 82.8 63 71.4
Glyma.03G160800 Glycine max HOM05D000254 ORTHO05D000165 1.6e-14 82.8 63 71.4
Glyma.04G172200 Glycine max HOM05D000254 ORTHO05D000165 1.6e-14 82.8 63 71.4
Glyma.06G110300 Glycine max HOM05D000254 ORTHO05D000165 1.6e-14 82.8 63 71.4
Glyma.07G188300 Glycine max HOM05D000254 ORTHO05D000165 1.6e-14 82.8 63 71.4
Glyma.08G271300 Glycine max HOM05D000254 ORTHO05D000165 1.6e-14 82.8 63 71.4
Glyma.09G085100 Glycine max HOM05D000254 ORTHO05D000165 1.6e-14 82.8 63 71.4
Glyma.09G092200 Glycine max HOM05D000254 ORTHO05D000165 1.6e-14 82.8 63 71.4
Glyma.10G093700 Glycine max HOM05D000254 ORTHO05D000165 1.6e-14 82.8 63 71.4
Glyma.10G133300 Glycine max HOM05D000254 ORTHO05D000165 1.6e-14 82.8 63 71.4
Glyma.10G133400 Glycine max HOM05D000254 ORTHO05D000165 1.6e-14 82.8 63 71.4
Glyma.14G102400 Glycine max HOM05D000254 ORTHO05D000165 1.6e-14 82.8 63 71.4
Glyma.15G026200 Glycine max HOM05D000254 ORTHO05D000165 1.6e-14 82.8 63 71.4
Glyma.15G258000 Glycine max HOM05D000254 ORTHO05D000165 1.6e-14 82.8 63 71.4
Glyma.17G071500 Glycine max HOM05D000254 ORTHO05D000165 1.6e-14 82.8 63 71.4
Glyma.17G162400 Glycine max HOM05D000254 ORTHO05D000165 1.6e-14 82.8 63 71.4
LjContig00141g0013529 Lotus japonicus HOM05D000254 ORTHO05D000165 2.1e-14 82.4 54 79.6
Lj6g0025209 Lotus japonicus HOM05D000254 ORTHO05D000165 3.5e-14 81.6 59 78.0
Glyma.18G099300 Glycine max HOM05D000254 ORTHO05D000165 1.0e-13 80.1 63 69.8
Glyma.20G083200 Glycine max HOM05D000254 ORTHO05D000165 8.6e-13 77.0 58 70.7
Lj4g0019202 Lotus japonicus HOM05D000254 ORTHO05D000165 1.4e-10 69.7 51 74.5
Glyma.01G083800 Glycine max HOM05D000254 ORTHO05D000165 1.2e-09 66.6 50 68.0
Glyma.01G155700 Glycine max HOM05D000254 ORTHO05D000165 1.2e-09 66.6 50 68.0
Glyma.07G229400 Glycine max HOM05D000254 ORTHO05D000165 1.2e-09 66.6 50 68.0
Glyma.09G205200 Glycine max HOM05D000254 ORTHO05D000165 1.2e-09 66.6 50 68.0
Glyma.11G170400 Glycine max HOM05D000254 ORTHO05D000165 1.2e-09 66.6 50 68.0
Glyma.17G248000 Glycine max HOM05D000254 ORTHO05D000165 1.2e-09 66.6 50 68.0
Glyma.08G123900 Glycine max HOM05D000254 ORTHO05D000165 3.4e-09 65.1 50 66.0
Glyma.01G009100 Glycine max HOM05D000254 ORTHO05D000165 5.8e-09 64.3 46 78.3
Glyma.02G054300 Glycine max HOM05D000254 ORTHO05D000165 5.8e-09 64.3 50 66.0
Glyma.13G203500 Glycine max HOM05D000254 ORTHO05D000165 5.8e-09 64.3 46 78.3
Glyma.18G214900 Glycine max HOM05D000254 ORTHO05D000165 5.8e-09 64.3 46 78.3
Glyma.11G185400 Glycine max HOM05D000254 ORTHO05D000165 1.7e-08 62.8 63 60.3
Glyma.18G180700 Glycine max HOM05D000254 ORTHO05D000165 2.2e-08 62.4 63 60.3
Glyma.U036600 Glycine max HOM05D000254 ORTHO05D000165 2.9e-08 62.0 46 76.1
Glyma.19G084500 Glycine max HOM05D000254 ORTHO05D000165 3.8e-08 61.6 50 66.0
Lj5g0002707 Lotus japonicus HOM05D000254 ORTHO05D000165 6.4e-08 60.8 59 62.7
Os02g0301400 Oryza sativa ssp. japonica HOM05D000254 ORTHO05D000165 1.1e-07 60.1 60 56.7
Glyma.02G075500 Glycine max HOM05D000254 ORTHO05D000165 3.2e-07 58.5 41 80.5
Glyma.18G248500 Glycine max HOM05D000254 ORTHO05D000165 5.4e-07 57.8 49 61.2
Medtr8g032820 Medicago truncatula HOM05D000254 ORTHO05D000165 9.3e-07 57.0 60 53.3
Oeu053797.1 Olea europaea HOM05D000254 ORTHO05D000165 2.1e-06 55.8 50 62.0
Oeu047881.1 Olea europaea HOM05D000254 ORTHO05D000165 2.7e-06 55.5 50 60.0
CANSAT01G2927 Cannabis sativa HOM05D000254 ORTHO05D000165 3.5e-06 55.1 60 50.0
CANSAT54G2521 Cannabis sativa HOM05D000254 ORTHO05D000165 3.5e-06 55.1 60 50.0
CANSAT56G1760 Cannabis sativa HOM05D000254 ORTHO05D000165 3.5e-06 55.1 60 50.0
TPR.G39467 Trifolium pratense HOM05D000254 ORTHO05D000165 3.5e-06 55.1 59 50.8
TWI73G0830 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 3.5e-06 55.1 57 52.6
Glyma.10G055700 Glycine max HOM05D000254 ORTHO05D000165 4.6e-06 54.7 59 50.8
Aqoxy4G01105 Aquilegia oxysepala HOM05D000254 ORTHO05D000165 6.0e-06 54.3 58 51.7
Manes.16G058300 Manihot esculenta HOM05D000254 ORTHO05D000165 6.0e-06 54.3 60 48.3
PSO170G0724 Papaver somniferum HOM05D000254 ORTHO05D000165 6.0e-06 54.3 59 50.8
PSO724G0323 Papaver somniferum HOM05D000254 ORTHO05D000165 6.0e-06 54.3 59 50.8
PGR142G1242 Punica granatum HOM05D000254 ORTHO05D000165 6.0e-06 54.3 60 50.0
Aqoxy4G01490 Aquilegia oxysepala HOM05D000254 ORTHO05D000165 7.8e-06 53.9 59 50.8
Ciclev10030070m.g Citrus clementina HOM05D000254 ORTHO05D000165 7.8e-06 53.9 60 51.7
Manes.01G190751 Manihot esculenta HOM05D000254 ORTHO05D000165 7.8e-06 53.9 60 48.3
Manes.08G061350 Manihot esculenta HOM05D000254 ORTHO05D000165 7.8e-06 53.9 60 48.3
Manes.10G056233 Manihot esculenta HOM05D000254 ORTHO05D000165 7.8e-06 53.9 60 48.3
Manes.12G066306 Manihot esculenta HOM05D000254 ORTHO05D000165 7.8e-06 53.9 60 48.3
Manes.15G179352 Manihot esculenta HOM05D000254 ORTHO05D000165 7.8e-06 53.9 60 48.3
Manes.16G054463 Manihot esculenta HOM05D000254 ORTHO05D000165 7.8e-06 53.9 60 48.3
Manes.16G056300 Manihot esculenta HOM05D000254 ORTHO05D000165 7.8e-06 53.9 60 48.3
Manes.18G128060 Manihot esculenta HOM05D000254 ORTHO05D000165 7.8e-06 53.9 60 48.3


User provided reference genes

Program Settings