Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33528 Trifolium pratense HOM05D007850 ORTHO05D009594 1.6e-36 155.6 80 100.0
Psat1g048160 Pisum sativum HOM05D007850 ORTHO05D009594 3.6e-28 127.9 80 83.8
Ca_25585_v3 Cicer arietinum L. HOM05D007850 ORTHO05D009594 1.5e-23 112.5 80 75.0
Glyma.01G006200 Glycine max HOM05D007850 ORTHO05D009594 7.2e-21 103.6 80 71.2
Glyma.07G125500 Glycine max HOM05D007850 ORTHO05D009594 1.2e-20 102.8 80 70.0
Phvul.004G174800 Phaseolus vulgaris HOM05D007850 ORTHO05D009594 1.8e-19 99.0 80 70.0
Lj2g0008653 Lotus japonicus HOM05D007850 ORTHO05D009594 3.9e-19 97.8 80 68.8
Lalb_Chr22g0352511 Lupinus albus HOM05D007850 ORTHO05D009594 8.8e-19 96.7 80 65.0
Medtr6g090490 Medicago truncatula HOM05D007850 ORTHO05D009594 8.8e-19 96.7 76 69.7
arahy.Tifrunner.gnm1.ann1.X02Y3Q Arachis hypogaea HOM05D007850 ORTHO05D009594 5.7e-18 94.0 81 66.7
Gohir.A08G243300 Gossypium hirsutum HOM05D007850 ORTHO05D009594 2.2e-17 92.0 80 61.2
Haze_25835 Corylus avellana HOM05D007850 ORTHO05D009594 6.3e-17 90.5 78 62.8
Gohir.D08G264200 Gossypium hirsutum HOM05D007850 ORTHO05D009594 6.3e-17 90.5 80 58.8
Gorai.004G282100 Gossypium raimondii HOM05D007850 ORTHO05D009594 6.3e-17 90.5 80 58.8
Manes.03G028100 Manihot esculenta HOM05D007850 ORTHO05D009594 1.4e-16 89.4 78 62.8
Cfa003164 Carpinus fangiana HOM05D007850 ORTHO05D009594 2.4e-16 88.6 76 63.2
Gohir.A06G068000 Gossypium hirsutum HOM05D007850 ORTHO05D009594 5.3e-16 87.4 78 59.0
arahy.Tifrunner.gnm1.ann1.X1KXE8 Arachis hypogaea HOM05D012186 ORTHO05D009594 1.6e-15 85.9 76 64.5
Thecc.09G099000 Theobroma cacao HOM05D007850 ORTHO05D009594 4.5e-15 84.3 76 59.2
Sabra12G0079700 Salix brachista HOM05D007850 ORTHO05D009594 7.7e-15 83.6 75 61.3
Cpa.g.sc78.26 Carica papaya HOM05D007850 ORTHO05D009594 1.0e-14 83.2 76 57.9
Duzib168G0149 Durio zibethinus HOM05D007850 ORTHO05D009594 1.3e-14 82.8 76 59.2
MELO3C015421.2 Cucumis melo HOM05D007850 ORTHO05D009594 2.9e-14 81.6 79 58.2
Gohir.D06G066600 Gossypium hirsutum HOM05D007850 ORTHO05D009594 5.0e-14 80.9 78 57.7
Potri.015G106700 Populus trichocarpa HOM05D007850 ORTHO05D009594 1.1e-13 79.7 80 57.5
Hma1.2p1_0208F.1_g088080 Hydrangea macrophylla HOM05D007850 ORTHO05D009594 1.9e-13 79.0 77 58.4
Gorai.010G078100 Gossypium raimondii HOM05D007850 ORTHO05D009594 2.5e-13 78.6 78 56.4
Gohir.D07G009300 Gossypium hirsutum HOM05D007850 ORTHO05D009594 3.2e-13 78.2 76 56.6
Gorai.001G009500 Gossypium raimondii HOM05D007850 ORTHO05D009594 3.2e-13 78.2 76 56.6
FAN26G0602 Fragaria x ananassa HOM05D007850 ORTHO05D009594 5.5e-13 77.4 77 55.8
FAN26G2005 Fragaria x ananassa HOM05D007850 ORTHO05D009594 5.5e-13 77.4 77 55.8
Gohir.A07G009000 Gossypium hirsutum HOM05D007850 ORTHO05D009594 5.5e-13 77.4 76 56.6
ClCG03G016060 Citrullus lanatus HOM05D007850 ORTHO05D009594 7.2e-13 77.0 79 54.4
QL08p048105 Quercus lobata HOM05D007850 ORTHO05D009594 7.2e-13 77.0 80 55.0
CANSAT56G2953 Cannabis sativa HOM05D007850 ORTHO05D009594 9.4e-13 76.6 75 56.0
FAN23G2338 Fragaria x ananassa HOM05D007850 ORTHO05D009594 9.4e-13 76.6 76 53.9
Actinidia17514 Actinidia chinensis HOM05D007850 ORTHO05D009594 1.2e-12 76.3 75 53.3
FvH4_1g06390 Fragaria vesca HOM05D007850 ORTHO05D009594 1.2e-12 76.3 77 54.5
FAN19G1200 Fragaria x ananassa HOM05D007850 ORTHO05D009594 1.2e-12 76.3 77 54.5
FAN28G1089 Fragaria x ananassa HOM05D007850 ORTHO05D009594 1.2e-12 76.3 77 54.5
Nn8g39046 Nelumbo nucifera HOM05D007850 ORTHO05D009594 1.2e-12 76.3 80 55.0
Prupe.7G218200 Prunus persica HOM05D007850 ORTHO05D009594 1.2e-12 76.3 75 57.3
QL03p050300 Quercus lobata HOM05D007850 ORTHO05D009594 1.2e-12 76.3 80 55.0
SalBow6G1226 Salvia bowleyana HOM05D007850 ORTHO05D009594 1.6e-12 75.9 80 57.5
arahy.Tifrunner.gnm1.ann1.1KH3J5 Arachis hypogaea HOM05D007850 ORTHO05D009594 3.6e-12 74.7 79 55.7
arahy.Tifrunner.gnm1.ann1.THK1KM Arachis hypogaea HOM05D007850 ORTHO05D009594 3.6e-12 74.7 79 55.7
RcHm_v2.0_Chr2g0092131 Rosa chinensis HOM05D007850 ORTHO05D009594 8.0e-12 73.6 77 53.2
Cc06_g10600 Coffea canephora HOM05D007850 ORTHO05D009594 1.0e-11 73.2 73 56.2
Rhsim05G0038300 Rhododendron simsii HOM05D007850 ORTHO05D009594 1.0e-11 73.2 78 50.0
Aqoxy7G01385 Aquilegia oxysepala HOM05D007850 ORTHO05D009594 3.0e-11 71.6 66 60.6
Eucgr.K01055 Eucalyptus grandis HOM05D007850 ORTHO05D009594 3.0e-11 71.6 76 53.9
COL.COLO4_34726 Corchorus olitorius HOM05D007850 ORTHO05D009594 8.8e-11 70.1 56 64.3
Sed0003200 Sechium edule HOM05D007850 ORTHO05D009594 1.1e-10 69.7 73 54.8
TAR624G0098 Trochodendron aralioides HOM05D007850 ORTHO05D009594 1.1e-10 69.7 80 52.5
Nitab4.5_0003079g0010 Nicotiana tabacum HOM05D007850 ORTHO05D009594 9.7e-10 66.6 77 50.6
AUR62021391 Chenopodium quinoa HOM05D007850 ORTHO05D009594 1.3e-09 66.2 79 53.2
CSS0000041 Camellia sinensis var. sinensis HOM05D007850 ORTHO05D009594 2.2e-09 65.5 79 49.4
AUR62010878 Chenopodium quinoa HOM05D007850 ORTHO05D009594 2.2e-09 65.5 79 53.2
Solyc12g008560.1 Solanum lycopersicum HOM05D007850 ORTHO05D009594 2.2e-09 65.5 77 53.2
Nitab4.5_0000566g0200 Nicotiana tabacum HOM05D007850 ORTHO05D009594 4.8e-09 64.3 77 48.1
Peaxi162Scf00944g00009 Petunia axillaris HOM05D007850 ORTHO05D009594 6.3e-09 63.9 78 44.9
Ciclev10006350m.g Citrus clementina HOM05D007850 ORTHO05D009594 8.2e-09 63.5 83 45.8
Ciclev10010071m.g Citrus clementina HOM05D007850 ORTHO05D009594 1.4e-08 62.8 75 46.7
DCAR_012035 Daucus carota HOM05D007850 ORTHO05D009594 1.8e-08 62.4 81 49.4
CsaV3_1G039900 Cucumis sativus L. HOM05D007850 ORTHO05D009594 2.4e-08 62.0 56 60.7
Ah.09g230500 Amaranthus hybridus HOM05D007850 ORTHO05D009594 4.1e-08 61.2 78 47.4
Sc18g0001560 Simmondsia chinensis HOM05D007850 ORTHO05D009594 4.1e-08 61.2 75 52.0
PGSC0003DMG400000292 Solanum tuberosum HOM05D007850 ORTHO05D009594 4.1e-08 61.2 77 49.4
CAN.G1591.18 Capsicum annuum HOM05D007850 ORTHO05D009594 5.3e-08 60.8 78 47.4
CAN.G2021.4 Capsicum annuum HOM05D007850 ORTHO05D009594 5.3e-08 60.8 78 47.4
DCAR_000091 Daucus carota HOM05D007850 ORTHO05D009594 5.3e-08 60.8 81 48.1
DCAR_012032 Daucus carota HOM05D007850 ORTHO05D009594 5.3e-08 60.8 81 48.1
EL10Ac8g18368 Beta vulgaris HOM05D007850 ORTHO05D009594 7.0e-08 60.5 73 52.1
CAN.G1349.15 Capsicum annuum HOM05D007850 ORTHO05D009594 1.2e-07 59.7 78 47.4
CAN.G1084.1 Capsicum annuum HOM05D007850 ORTHO05D009594 1.6e-07 59.3 78 46.2
CAN.G1357.32 Capsicum annuum HOM05D007850 ORTHO05D009594 7.7e-07 57.0 78 46.2
CAN.G1677.12 Capsicum annuum HOM05D007850 ORTHO05D009594 7.7e-07 57.0 78 44.9
Sopen12g003500 Solanum pennellii HOM05D007850 ORTHO05D009594 1.3e-06 56.2 76 46.1
ATR0705G131 Amborella trichopoda HOM05D007850 ORTHO05D009594 1.7e-06 55.8 72 44.4
Lsat_1_v5_gn_7_39541 Lactuca sativa HOM05D007850 ORTHO05D009594 6.5e-06 53.9 50 60.0


User provided reference genes

Program Settings