Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 5.1e-136 487.6 231 100.0
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.3e-115 419.9 231 82.7
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 7.4e-111 404.1 232 79.7
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 2.4e-109 399.1 231 76.2
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 3.1e-109 398.7 232 78.9
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.9e-99 365.5 272 64.0
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 1.2e-97 360.1 231 71.9
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 1.2e-97 360.1 231 71.9
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 6.7e-96 354.4 231 70.6
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 5.3e-93 344.7 232 69.8
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 5.3e-93 344.7 232 69.8
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 3.8e-91 338.6 231 67.5
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 3.8e-91 338.6 233 70.4
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-90 336.7 231 67.1
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-88 330.1 234 66.7
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.0e-75 287.3 225 58.2
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.1e-74 283.9 225 59.6
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 7.3e-74 281.2 225 59.1
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 7.3e-74 281.2 225 59.1
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.9e-72 274.2 220 57.7
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 1.2e-71 273.9 224 56.2
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 1.5e-71 273.5 218 57.8
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.8e-71 271.6 230 56.1
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.7e-70 270.0 226 55.8
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.7e-70 268.9 224 54.9
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 4.9e-70 268.5 225 55.1
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 6.4e-70 268.1 225 54.7
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 1.1e-69 267.3 219 58.4
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.4e-69 266.9 206 59.2
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.9e-69 266.5 220 55.9
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.4e-69 265.0 230 53.9
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-68 263.8 225 54.2
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.2e-68 263.8 220 55.5
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 1.6e-68 263.5 225 55.6
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.7e-68 262.7 224 54.5
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.7e-68 262.7 220 54.1
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.6e-68 261.9 228 53.1
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 1.0e-67 260.8 225 55.6
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 1.0e-67 260.8 226 54.0
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-66 257.3 220 54.5
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.1e-66 257.3 220 55.0
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 1.9e-66 256.5 226 53.1
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 3.3e-66 255.8 212 59.4
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 5.6e-66 255.0 227 54.6
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 5.6e-66 255.0 226 52.2
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.2e-65 251.5 222 52.7
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.2e-65 251.5 225 51.6
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 6.8e-64 248.1 226 51.8
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.9e-62 242.7 219 51.6
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-61 240.4 204 53.4
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.2e-61 239.2 220 50.0
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 1.2e-60 237.3 225 53.3
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.1e-60 236.5 204 52.9
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 6.6e-59 231.5 233 49.8
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 8.6e-59 231.1 232 49.6
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-58 230.7 220 51.4
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 1.5e-58 230.3 234 48.7
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 1.5e-58 230.3 234 48.7
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 1.5e-58 230.3 234 48.7
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 1.1e-56 224.2 236 49.6
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.4e-55 218.8 174 58.0
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 8.3e-54 214.5 222 50.9
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 2.4e-53 213.0 232 46.1
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 2.4e-53 213.0 234 47.9
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 3.2e-53 212.6 228 50.0
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 5.4e-53 211.8 187 56.7
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 7.1e-53 211.5 241 44.8
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 9.2e-53 211.1 226 45.1
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 7.8e-52 208.0 225 47.1
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.8e-52 208.0 230 47.8
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.0e-51 207.6 224 45.1
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.9e-51 205.7 227 47.1
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 1.1e-50 204.1 223 48.4
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.5e-50 203.8 224 46.0
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 3.3e-50 202.6 224 47.8
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 1.6e-49 200.3 225 45.8
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 6.8e-48 194.9 223 44.8
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 8.9e-48 194.5 222 46.4
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.2e-47 194.1 227 43.2
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 5.8e-47 191.8 201 51.7
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.8e-47 191.8 214 47.7
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 9.9e-47 191.0 233 44.6
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 9.9e-47 191.0 222 43.7
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 2.2e-46 189.9 145 60.0
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.2e-45 186.0 224 43.3
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.2e-45 186.0 224 43.3
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 7.1e-45 184.9 223 41.7
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.6e-44 183.7 135 60.0
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 3.5e-44 182.6 225 42.7
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 3.5e-44 182.6 223 42.6
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 3.3e-42 176.0 225 40.4
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 5.6e-42 175.3 162 51.2
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 1.6e-41 173.7 126 63.5
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.1e-40 171.0 227 39.6
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 3.1e-40 169.5 143 54.5
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 2.9e-38 162.9 196 39.3
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 8.4e-38 161.4 239 37.2
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 8.4e-38 161.4 196 42.9
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 3.2e-37 159.5 200 43.0
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 2.7e-36 156.4 226 40.7
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.5e-36 156.0 112 62.5
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 7.8e-36 154.8 226 41.2
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 1.0e-35 154.5 300 31.3
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.9e-35 152.5 136 50.0
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 1.1e-34 151.0 139 51.8
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 1.1e-34 151.0 139 51.8
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 6.2e-33 145.2 184 43.5
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.2e-33 145.2 234 35.5
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 4.0e-32 142.5 135 52.6
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 5.3e-32 142.1 204 41.2
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 4.5e-31 139.0 124 52.4
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 5.8e-31 138.7 136 52.2
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.2e-30 136.7 223 35.4
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 1.1e-29 134.4 180 42.8
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 2.7e-28 129.8 229 38.0
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 1.0e-27 127.9 127 48.0
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.5e-26 124.0 140 47.9
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 1.9e-26 123.6 224 37.5
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 1.6e-25 120.6 127 45.7
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.5e-23 112.5 191 36.1
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 4.9e-22 109.0 134 43.3
Phvul.007G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.9e-19 99.4 111 45.0
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 5.1e-19 99.0 227 29.5
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 1.1e-18 97.8 112 44.6
RcHm_v2.0_Chr5g0076541 Rosa chinensis HOM05D005276 ORTHO05D006813 1.6e-17 94.0 76 56.6
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.1e-17 93.6 122 42.6
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 2.1e-17 93.6 102 47.1
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 1.4e-16 90.9 93 46.2
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.4e-13 80.9 98 42.9
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 2.7e-12 76.6 83 48.2
TPR.G33490 Trifolium pratense HOM05D005276 ORTHO05D006813 3.0e-11 73.2 79 45.6
TPR.G33511 Trifolium pratense HOM05D005276 ORTHO05D006813 5.1e-11 72.4 76 48.7
Psat1g051400 Pisum sativum HOM05D005276 ORTHO05D006813 3.3e-10 69.7 85 44.7
Dinv42430 Davidia involucrata HOM05D005276 ORTHO05D006813 9.7e-10 68.2 81 42.0
Dinv03816 Davidia involucrata HOM05D031496 ORTHO05D029219 1.7e-06 57.4 59 44.1


User provided reference genes

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