Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 1.4e-147 526.2 252 100.0
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 9.2e-131 470.3 252 88.9
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 3.0e-129 465.3 252 87.3
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 1.5e-128 463.0 252 87.7
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 1.5e-125 453.0 252 84.9
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 1.1e-123 446.8 252 84.5
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 4.6e-122 441.4 252 83.7
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 1.0e-121 440.3 252 82.5
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 1.1e-120 436.8 252 81.3
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 1.5e-120 436.4 252 82.5
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 2.5e-120 435.6 252 82.1
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 5.6e-112 407.9 252 74.2
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 5.6e-112 407.9 262 76.0
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 2.1e-111 406.0 252 74.2
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 9.0e-110 400.6 252 71.4
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 1.5e-109 399.8 251 72.9
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 4.9e-108 394.8 252 71.4
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 4.9e-108 394.8 252 71.4
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 4.9e-108 394.8 252 71.4
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 6.4e-108 394.4 252 72.6
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 1.4e-107 393.3 252 71.0
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 2.4e-107 392.5 252 71.0
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 3.2e-107 392.1 246 73.2
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 9.3e-107 390.6 252 71.4
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 9.3e-107 390.6 252 73.0
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 1.6e-106 389.8 252 73.0
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 1.6e-106 389.8 252 73.0
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 2.7e-106 389.0 252 71.8
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 3.5e-106 388.7 252 71.4
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 3.0e-105 385.6 252 71.0
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 6.6e-105 384.4 252 72.2
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 1.1e-104 383.6 252 69.8
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 1.5e-104 383.3 248 70.6
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 7.3e-104 380.9 252 67.9
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 9.6e-104 380.6 252 71.0
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 1.6e-103 379.8 252 69.8
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 6.2e-103 377.9 252 69.0
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 1.5e-101 373.2 252 70.6
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 3.4e-101 372.1 252 69.8
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 4.5e-101 371.7 252 67.9
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 5.8e-101 371.3 252 68.3
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 7.6e-101 370.9 256 69.5
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 9.9e-101 370.5 252 67.5
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 1.7e-100 369.8 252 69.4
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 1.7e-100 369.8 252 70.2
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 1.7e-100 369.8 252 69.4
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 2.2e-100 369.4 252 67.1
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 2.9e-100 369.0 254 67.7
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 2.9e-100 369.0 252 69.0
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 3.8e-100 368.6 252 66.7
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 8.4e-100 367.5 253 66.8
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 1.9e-99 366.3 253 67.6
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 2.4e-99 365.9 252 66.7
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 3.2e-99 365.5 251 66.5
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 3.2e-99 365.5 252 66.3
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 5.4e-99 364.8 253 67.2
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 7.1e-99 364.4 252 65.5
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 1.2e-98 363.6 253 66.8
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 2.1e-98 362.8 253 66.4
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 2.7e-98 362.5 254 67.7
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 6.0e-98 361.3 252 67.1
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 6.0e-98 361.3 253 65.6
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 1.8e-97 359.8 255 66.7
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 1.8e-97 359.8 253 65.6
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 3.0e-97 359.0 253 66.4
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 3.0e-97 359.0 253 65.2
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 5.1e-97 358.2 252 65.5
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 5.1e-97 358.2 252 65.1
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 1.9e-96 356.3 252 65.5
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 2.5e-96 355.9 252 66.7
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 3.3e-96 355.5 252 65.1
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 5.6e-96 354.8 254 64.2
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 5.6e-96 354.8 254 64.2
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 5.6e-96 354.8 254 64.2
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 5.6e-96 354.8 254 64.2
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 2.1e-95 352.8 254 63.8
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 2.8e-95 352.4 254 66.1
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 2.8e-95 352.4 249 64.7
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 4.8e-95 351.7 254 65.7
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 1.1e-94 350.5 252 65.1
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 2.4e-94 349.4 254 64.2
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 3.1e-94 349.0 254 63.4
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 4.0e-94 348.6 252 63.5
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 1.2e-93 347.1 252 66.7
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 2.0e-93 346.3 250 63.2
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 4.5e-93 345.1 256 63.3
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 1.7e-92 343.2 252 67.1
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 2.9e-92 342.4 250 64.4
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 1.1e-91 340.5 252 62.7
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 1.4e-91 340.1 252 62.3
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 3.2e-91 339.0 247 62.8
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 5.5e-91 338.2 253 61.3
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 2.3e-89 332.8 247 62.3
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 1.1e-86 323.9 230 66.1
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 6.7e-81 304.7 248 57.3
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 6.7e-81 304.7 252 55.6
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 8.7e-81 304.3 241 59.3
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 1.5e-80 303.5 205 67.3
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 3.3e-80 302.4 239 56.1
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 1.1e-75 287.3 251 53.8
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 7.9e-74 281.2 249 55.0
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 2.3e-73 279.6 249 54.6
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 3.3e-72 275.8 250 52.8
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 2.2e-71 273.1 250 52.0
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 1.3e-63 247.3 252 47.6
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 6.3e-63 245.0 154 68.2
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 7.2e-59 231.5 267 43.4
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 4.7e-58 228.8 251 43.4
Dinv34953 Davidia involucrata HOM05D006599 ORTHO05D008304 7.2e-51 204.9 141 69.5
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 6.1e-50 201.8 261 45.6
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 7.5e-48 194.9 284 41.5
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 6.5e-44 181.8 111 70.3
Dinv33823 Davidia involucrata HOM05D006599 ORTHO05D008304 2.6e-40 169.9 100 80.0
Lalb_Chr10g0093051 Lupinus albus HOM05D006599 ORTHO05D008304 5.0e-36 155.6 95 78.9
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 6.0e-21 105.5 69 58.0
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 1.1e-19 101.3 55 74.5
PGSC0003DMG400031200 Solanum tuberosum HOM05D006599 ORTHO05D008304 7.3e-19 98.6 92 56.5
TPR.G10380 Trifolium pratense HOM05D006599 ORTHO05D008304 7.3e-19 98.6 45 97.8
Peaxi162Scf00270g00422 Petunia axillaris HOM05D006599 ORTHO05D008304 9.5e-19 98.2 154 42.2
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 5.8e-16 89.0 49 69.4
Mapoly0033s0071 Marchantia polymorpha HOM05D006599 ORTHO05D008304 1.5e-08 64.3 121 29.8


User provided reference genes

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