Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33422 Trifolium pratense HOM05D008075 ORTHO05D010208 0.0e+00 1720.3 864 100.0
Ca_17596_v3 Cicer arietinum L. HOM05D000484 ORTHO05D010208 0.0e+00 1120.1 836 71.9
Medtr8g095160 Medicago truncatula HOM05D008075 ORTHO05D010208 0.0e+00 1109.4 869 69.6
Psat7g041720 Pisum sativum HOM05D008075 ORTHO05D010208 1.6e-299 1032.7 865 66.6
Glyma.05G197100 Glycine max HOM05D008075 ORTHO05D010208 9.1e-271 937.2 883 61.0
Lj4g0013275 Lotus japonicus HOM05D008075 ORTHO05D010208 4.1e-263 911.8 874 60.3
Glyma.08G004500 Glycine max HOM05D008075 ORTHO05D010208 1.9e-260 902.9 874 60.6
Phvul.002G277500 Phaseolus vulgaris HOM05D008075 ORTHO05D010208 1.6e-243 846.7 886 57.4
VMungo0251G2353 Vigna mungo HOM05D008075 ORTHO05D010208 2.3e-226 789.6 880 54.7
Lalb_Chr12g0202841 Lupinus albus HOM05D008075 ORTHO05D010208 1.2e-201 707.6 938 48.3
arahy.Tifrunner.gnm1.ann1.F3CBX5 Arachis hypogaea HOM05D008075 ORTHO05D010208 1.8e-181 640.6 880 48.4
arahy.Tifrunner.gnm1.ann1.BIR6X5 Arachis hypogaea HOM05D008075 ORTHO05D010208 9.1e-178 628.2 899 47.5
VMungo0251G2339 Vigna mungo HOM05D008075 ORTHO05D010208 1.0e-141 508.4 848 42.5
QL10p040186 Quercus lobata HOM05D008075 ORTHO05D010208 5.3e-93 346.7 897 33.2
Dinv08171 Davidia involucrata HOM05D008075 ORTHO05D010208 6.4e-83 313.2 900 31.7
Ciclev10024878m.g Citrus clementina HOM05D008075 ORTHO05D010208 8.4e-83 312.8 898 32.0
Potri.004G140000 Populus trichocarpa HOM05D008075 ORTHO05D010208 6.0e-73 280.0 867 31.5
Sabra04G0092100 Salix brachista HOM05D008075 ORTHO05D010208 9.7e-71 272.7 856 30.1
CiPaw.03G254600 Carya illinoinensis HOM05D008075 ORTHO05D010208 8.2e-70 269.6 508 38.8
GSVIVG01022404001 Vitis vinifera HOM05D008075 ORTHO05D010208 5.9e-68 263.5 300 52.3
Cc02_g33950 Coffea canephora HOM05D008075 ORTHO05D010208 9.4e-66 256.1 228 58.8
TAR376G0152 Trochodendron aralioides HOM05D008075 ORTHO05D010208 4.6e-65 253.8 545 36.9
TWI75G0788 Tripterygium wilfordii HOM05D008075 ORTHO05D010208 2.5e-63 248.1 865 29.9
CSS0037312 Camellia sinensis var. sinensis HOM05D008075 ORTHO05D010208 1.7e-62 245.4 284 50.4
MBI03_g11141_MAGBIO Magnolia biondii HOM05D008075 ORTHO05D010208 2.2e-62 245.0 223 57.8
ECA233G5565 Erigeron canadensis HOM05D008075 ORTHO05D010208 1.2e-60 239.2 296 49.3
Peaxi162Scf00658g00065 Petunia axillaris HOM05D008075 ORTHO05D010208 1.5e-60 238.8 210 60.0
Nn1g08564 Nelumbo nucifera HOM05D008075 ORTHO05D010208 5.9e-60 236.9 341 44.9
Rhsim08G0001000 Rhododendron simsii HOM05D008075 ORTHO05D010208 1.7e-59 235.3 496 37.7
PGSC0003DMG400022727 Solanum tuberosum HOM05D008075 ORTHO05D010208 2.9e-59 234.6 214 57.5
Nitab4.5_0005586g0040 Nicotiana tabacum HOM05D008075 ORTHO05D010208 3.8e-59 234.2 214 59.3
Solyc08g080000.3 Solanum lycopersicum HOM05D008075 ORTHO05D010208 5.0e-59 233.8 214 57.0
HanXRQChr15g0468991 Helianthus annuus HOM05D008075 ORTHO05D010208 8.5e-59 233.0 286 46.5
Sc09g0004370 Simmondsia chinensis HOM05D008075 ORTHO05D010208 8.5e-59 233.0 329 45.0
Sopen08g028360 Solanum pennellii HOM05D008075 ORTHO05D010208 8.5e-59 233.0 214 57.0
Oeu011019.1 Olea europaea HOM05D002427 ORTHO05D002818 2.5e-58 231.5 274 49.3
ATR0171G010 Amborella trichopoda HOM05D008075 ORTHO05D010208 3.2e-58 231.1 196 59.2
SGA_v2.0_scaffold54G19596 Striga asiatica HOM05D008075 ORTHO05D010208 9.4e-58 229.6 247 51.8
Lsat_1_v5_gn_5_69300 Lactuca sativa HOM05D008075 ORTHO05D010208 1.2e-57 229.2 192 59.4
THA.LOC104819473 Tarenaya hassleriana HOM05D008075 ORTHO05D010208 1.2e-57 229.2 232 53.9
Nn5g27987 Nelumbo nucifera HOM05D008075 ORTHO05D010208 3.6e-57 227.6 229 56.8
Migut.H00807 Erythranthe guttata HOM05D008075 ORTHO05D010208 1.8e-56 225.3 218 59.2
HPP92_002184 Vanilla planifolia HOM05D008075 ORTHO05D010208 3.0e-56 224.6 220 55.0
PSO782G2813 Papaver somniferum HOM05D008075 ORTHO05D010208 1.5e-55 222.2 214 55.6
Os03g0703300 Oryza sativa ssp. japonica HOM05D008075 ORTHO05D010208 7.4e-55 219.9 206 56.8
Manes.12G084200 Manihot esculenta HOM05D008075 ORTHO05D010208 2.2e-54 218.4 304 46.4
PSO170G3563 Papaver somniferum HOM05D008075 ORTHO05D010208 4.8e-54 217.2 214 54.7
Zm00001eb054280 Zea mays HOM05D008075 ORTHO05D010208 4.8e-54 217.2 206 56.8
Aqoxy2G00609 Aquilegia oxysepala HOM05D008075 ORTHO05D010208 1.8e-53 215.3 211 58.3
EL10Ac4g08956 Beta vulgaris HOM05D008075 ORTHO05D010208 1.8e-53 215.3 866 29.1
AUR62039042 Chenopodium quinoa HOM05D008075 ORTHO05D010208 7.7e-52 209.9 886 29.3
Ah.06g191710 Amaranthus hybridus HOM05D008075 ORTHO05D010208 8.5e-51 206.5 319 42.0
Nitab4.5_0000947g0070 Nicotiana tabacum HOM05D008075 ORTHO05D010208 1.4e-50 205.7 214 54.2
SalBow1G7185 Salvia bowleyana HOM05D008075 ORTHO05D010208 8.8e-48 196.4 273 45.1
Hund06889 Selenicereus undatus HOM05D008075 ORTHO05D010208 2.6e-47 194.9 900 28.3
AUR62004796 Chenopodium quinoa HOM05D008075 ORTHO05D010208 1.7e-43 182.2 898 28.6
CAN.G630.6 Capsicum annuum HOM05D008075 ORTHO05D010208 4.5e-36 157.5 156 53.8
SEGI_31365 Sequoiadendron giganteum HOM05D008075 ORTHO05D010208 1.2e-33 149.4 169 43.8
Mapoly0089s0038 Marchantia polymorpha HOM05D008075 ORTHO05D010208 1.1e-29 136.3 171 43.3
SMO266G0073 Selaginella moellendorffii HOM05D008075 ORTHO05D010208 9.1e-29 133.3 192 43.2
Pp3c6_3110 Physcomitrium patens HOM05D008075 ORTHO05D010208 2.5e-26 125.2 208 38.5
Nn5g27981 Nelumbo nucifera HOM05D008075 ORTHO05D010208 1.0e-24 119.8 148 48.0
Pp3c16_21630 Physcomitrium patens HOM05D008075 ORTHO05D010208 2.3e-24 118.6 257 31.9
Pp3c6_900 Physcomitrium patens HOM05D008075 ORTHO05D010208 7.5e-23 113.6 198 35.4
Pp3c6_920 Physcomitrium patens HOM05D008075 ORTHO05D010208 7.5e-23 113.6 198 35.4
CBR_g31168 Chara braunii HOM05D008075 ORTHO05D010208 1.5e-10 72.8 144 32.6
HanXRQChr07g0199571 Helianthus annuus HOM05D008075 ORTHO05D010208 4.7e-09 67.8 50 64.0
Nn5g28099 Nelumbo nucifera HOM05D004492 ORTHO05D005602 4.7e-09 67.8 83 51.8
CBR_g10951 Chara braunii HOM05D008075 ORTHO05D010208 1.8e-08 65.9 141 30.5
AagrBONN_evm.TU.Sc2ySwM_362.1056 Anthoceros agrestis HOM05D008075 ORTHO05D010208 1.2e-07 63.2 134 29.9
HanXRQChr10g0307451 Helianthus annuus HOM05D008075 ORTHO05D010208 3.4e-07 61.6 51 58.8


User provided reference genes

Program Settings