Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3336 Trifolium pratense HOM05D012242 ORTHO05D001155 4.3e-161 571.2 285 100.0
Medtr4g007240 Medicago truncatula HOM05D012242 ORTHO05D001155 4.8e-120 434.9 257 80.5
Psat7g263120 Pisum sativum HOM05D012242 ORTHO05D001155 1.1e-108 397.1 252 74.2
Medtr8g102000 Medicago truncatula HOM05D012242 ORTHO05D001155 8.3e-96 354.4 253 69.6
Lj3g0002390 Lotus japonicus HOM05D012242 ORTHO05D001155 1.8e-90 336.7 251 62.9
Lalb_Chr04g0264551 Lupinus albus HOM05D012242 ORTHO05D001155 9.9e-73 277.7 245 54.7
arahy.Tifrunner.gnm1.ann1.3DAB2G Arachis hypogaea HOM05D012242 ORTHO05D001155 1.4e-71 273.9 245 51.8
Glyma.07G022100 Glycine max HOM05D012242 ORTHO05D001155 5.4e-71 271.9 248 52.4
Phvul.010G162300 Phaseolus vulgaris HOM05D012242 ORTHO05D001155 5.4e-71 271.9 258 51.6
arahy.Tifrunner.gnm1.ann1.58PES0 Arachis hypogaea HOM05D012242 ORTHO05D001155 1.6e-70 270.4 248 51.2
Phvul.010G162233 Phaseolus vulgaris HOM05D012242 ORTHO05D001155 1.5e-68 263.8 245 50.6
VMungo0331G1011 Vigna mungo HOM05D012242 ORTHO05D001155 1.1e-34 151.4 246 38.6
Medtr4g124160 Medicago truncatula HOM05D001729 ORTHO05D001155 2.5e-23 113.6 284 31.3
Phvul.009G222800 Phaseolus vulgaris HOM05D001729 ORTHO05D001155 2.5e-23 113.6 256 31.6
VMungo1309G0868 Vigna mungo HOM05D001729 ORTHO05D001155 5.5e-23 112.5 255 32.2
Psat4g020960 Pisum sativum HOM05D001729 ORTHO05D001155 6.1e-22 109.0 261 31.4
Lj4g0002979 Lotus japonicus HOM05D001729 ORTHO05D001155 8.0e-22 108.6 286 29.4
TPR.G12691 Trifolium pratense HOM05D001729 ORTHO05D011785 5.2e-21 105.9 269 30.5
Glyma.09G075900 Glycine max HOM05D001729 ORTHO05D001155 2.8e-19 100.1 263 27.8
QL05p074214 Quercus lobata HOM05D001729 ORTHO05D001155 9.1e-18 95.1 243 28.8
PGSC0003DMG400005639 Solanum tuberosum HOM05D001729 ORTHO05D001155 3.8e-16 89.7 263 28.9
QL02p054283 Quercus lobata HOM05D001729 ORTHO05D001155 2.7e-14 83.6 242 27.3
QL05p065010 Quercus lobata HOM05D001729 ORTHO05D001155 3.6e-14 83.2 278 27.0
FAN05G3901 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.3e-13 80.5 282 28.0
QL05p074156 Quercus lobata HOM05D001729 ORTHO05D001155 4.0e-13 79.7 248 27.0
QL07p036110 Quercus lobata HOM05D001729 ORTHO05D001155 4.0e-13 79.7 274 27.7
Lsat_1_v5_gn_6_92061 Lactuca sativa HOM05D001729 ORTHO05D001155 6.8e-13 79.0 224 29.9
FAN02G0048 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.8e-13 78.6 260 26.5
QL05p074174 Quercus lobata HOM05D001729 ORTHO05D001155 1.2e-12 78.2 248 26.6
FAN02G0583 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.0e-12 77.4 280 27.5
AUR62006003 Chenopodium quinoa HOM05D001729 ORTHO05D001155 7.5e-12 75.5 267 28.1
DCAR_004585 Daucus carota HOM05D001729 ORTHO05D001155 9.7e-12 75.1 266 25.6
AUR62035623 Chenopodium quinoa HOM05D001729 ORTHO05D001155 1.7e-11 74.3 275 28.7
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 1.7e-11 74.3 224 29.0
QL07p036134 Quercus lobata HOM05D001729 ORTHO05D001155 2.2e-11 73.9 258 29.5
RcHm_v2.0_Chr5g0018111 Rosa chinensis HOM05D001729 ORTHO05D001155 3.7e-11 73.2 269 24.5
Actinidia26989 Actinidia chinensis HOM05D007779 ORTHO05D010440 4.8e-11 72.8 200 29.0
FAN09G2508 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.3e-11 72.0 281 26.7
Thecc.03G222100 Theobroma cacao HOM05D001729 ORTHO05D001155 8.3e-11 72.0 257 24.9
FAN14G0866 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.4e-10 70.5 264 25.8
FAN14G5781 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.1e-10 70.1 264 25.8
AUR62023714 Chenopodium quinoa HOM05D038120 ORTHO05D001155 5.3e-10 69.3 268 22.8
QL07p019801 Quercus lobata HOM05D001729 ORTHO05D001155 5.3e-10 69.3 276 25.7
RcHm_v2.0_Chr6g0292271 Rosa chinensis HOM05D001729 ORTHO05D001155 7.0e-10 68.9 256 28.5
Sc19g0001870 Simmondsia chinensis HOM05D001729 ORTHO05D001155 9.1e-10 68.6 279 25.8
MD09G1201600 Malus domestica HOM05D001729 ORTHO05D001155 1.2e-09 68.2 261 23.4
FAN14G3807 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.0e-09 67.4 263 25.5
FvH4_6g01541 Fragaria vesca HOM05D001729 ORTHO05D001155 2.7e-09 67.0 266 23.7
QL08p043324 Quercus lobata HOM05D001729 ORTHO05D001155 2.7e-09 67.0 302 25.5
FAN14G2874 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.5e-09 66.2 266 23.3
FvH4_6g02041 Fragaria vesca HOM05D001729 ORTHO05D001155 7.7e-09 65.5 260 25.8
CSS0016313 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.0e-08 65.1 243 25.5
CSS0049849 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.0e-08 65.1 180 30.0
SGA_v2.0_scaffold1G00761 Striga asiatica HOM05D001729 ORTHO05D001155 1.0e-08 65.1 260 21.5
AUR62020680 Chenopodium quinoa HOM05D038120 ORTHO05D001155 1.3e-08 64.7 247 23.1
Lsat_1_v5_gn_5_31100 Lactuca sativa HOM05D001729 ORTHO05D001155 1.3e-08 64.7 220 27.3
Prupe.3G059600 Prunus persica HOM05D001729 ORTHO05D001155 1.3e-08 64.7 256 24.6
SGA_v2.0_scaffold1G00575 Striga asiatica HOM05D001729 ORTHO05D001155 1.3e-08 64.7 242 23.1
FAN14G1187 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.2e-08 63.9 247 23.9
FvH4_6g39371 Fragaria vesca HOM05D001729 ORTHO05D001155 3.8e-08 63.2 281 24.2
Potri.011G004800 Populus trichocarpa HOM05D001729 ORTHO05D001155 3.8e-08 63.2 247 26.3
FAN09G2757 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.0e-08 62.8 281 23.8
CSS0013591 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 8.5e-08 62.0 192 28.6
FAN14G1727 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.1e-07 61.6 281 23.5
Sabra11G0003700 Salix brachista HOM05D001729 ORTHO05D001155 1.1e-07 61.6 247 25.9
CSS0010874 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.9e-07 60.8 192 28.6
Aqoxy4G02867 Aquilegia oxysepala HOM05D000664 ORTHO05D010440 4.2e-07 59.7 240 26.2
vmacro17323 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 5.5e-07 59.3 192 27.6
ATR0796G283 Amborella trichopoda HOM05D015022 ORTHO05D011070 7.2e-07 58.9 177 24.3
Nitab4.5_0010853g0020 Nicotiana tabacum HOM05D001729 ORTHO05D001155 7.2e-07 58.9 196 27.0
PSO541G1556 Papaver somniferum HOM05D008326 ORTHO05D001155 7.2e-07 58.9 250 24.0
RcHm_v2.0_Chr2g0151111 Rosa chinensis HOM05D001729 ORTHO05D001155 7.2e-07 58.9 274 26.6
vmacro17325 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 2.1e-06 57.4 219 27.9
QL05p074143 Quercus lobata HOM05D000981 ORTHO05D001155 2.7e-06 57.0 212 26.4
PSO063G2324 Papaver somniferum HOM05D008326 ORTHO05D001155 3.6e-06 56.6 237 24.5
Prupe.1G512600 Prunus persica HOM05D001729 ORTHO05D001155 4.7e-06 56.2 129 29.5
RcHm_v2.0_Chr2g0163051 Rosa chinensis HOM05D001729 ORTHO05D001155 4.7e-06 56.2 134 31.3
FAN02G3094 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.1e-06 55.8 279 24.0
HanXRQChr04g0121411 Helianthus annuus HOM05D001729 ORTHO05D001155 8.0e-06 55.5 222 23.9


User provided reference genes

Program Settings