Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33338 Trifolium pratense HOM05D001560 ORTHO05D003613 2.2e-48 195.3 96 100.0
Ca_14832_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 2.3e-21 105.5 84 66.7
Ca_22164_v3 Cicer arietinum L. HOM05D001560 ORTHO05D010874 2.3e-21 105.5 84 66.7
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 1.1e-20 103.2 84 66.7
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 2.1e-19 99.0 84 66.7
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 2.1e-19 99.0 84 66.7
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 2.1e-19 99.0 84 66.7
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 2.1e-19 99.0 84 66.7
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 2.8e-19 98.6 69 71.0
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 1.8e-18 95.9 77 71.4
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 1.8e-18 95.9 77 71.4
arahy.Tifrunner.gnm1.ann1.7G246T Arachis hypogaea HOM05D001560 ORTHO05D003613 7.6e-17 90.5 84 63.1
arahy.Tifrunner.gnm1.ann1.JTWL6Q Arachis hypogaea HOM05D001560 ORTHO05D003613 7.6e-17 90.5 84 63.1
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 7.6e-17 90.5 77 67.5
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 7.6e-17 90.5 77 67.5
Nn4g26009 Nelumbo nucifera HOM05D001560 ORTHO05D003613 7.6e-17 90.5 77 67.5
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 9.9e-17 90.1 78 66.7
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 9.9e-17 90.1 77 67.5
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 1.7e-16 89.4 84 61.9
Hma1.2p1_0079F.1_g041900 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 1.7e-16 89.4 77 66.2
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 2.2e-16 89.0 77 67.5
Hma1.2p1_0261F.1_g105120 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 3.7e-16 88.2 77 66.2
Sc04g0005570 Simmondsia chinensis HOM05D001560 ORTHO05D003613 4.9e-16 87.8 77 64.9
RhsimMtG0005500 Rhododendron simsii HOM05D001560 ORTHO05D003613 1.1e-15 86.7 77 66.2
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 1.1e-15 86.7 77 64.9
CSS0047048 Camellia sinensis var. sinensis HOM05D001560 ORTHO05D003613 1.4e-15 86.3 77 64.9
CDE02G0303 Ceratophyllum demersum HOM05D001560 ORTHO05D003613 1.4e-15 86.3 77 63.6
COL.COLO4_04089 Corchorus olitorius HOM05D001560 ORTHO05D003613 7.1e-15 84.0 77 62.3
AL3G44410 Arabidopsis lyrata HOM05D001560 ORTHO05D003613 9.2e-15 83.6 77 63.6
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 9.2e-15 83.6 77 63.6
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 9.2e-15 83.6 77 63.6
BolSC28t60405H Brassica oleracea HOM05D001560 ORTHO05D003613 9.2e-15 83.6 77 63.6
BolSC28t60433H Brassica oleracea HOM05D001560 ORTHO05D003613 9.2e-15 83.6 77 63.6
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 9.2e-15 83.6 77 63.6
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 9.2e-15 83.6 77 64.9
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 9.2e-15 83.6 77 63.6
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 1.2e-14 83.2 77 63.6
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.2e-14 83.2 77 63.6
Gorai.005G104100 Gossypium raimondii HOM05D001560 ORTHO05D003613 1.6e-14 82.8 77 61.0
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 2.7e-14 82.0 84 58.3
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 7.8e-14 80.5 77 62.3
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 7.8e-14 80.5 58 75.9
Rhsim07G0227200 Rhododendron simsii HOM05D000187 ORTHO05D000230 1.3e-13 79.7 75 65.3
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 3.0e-13 78.6 67 68.7
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 3.0e-13 78.6 67 68.7
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 3.0e-13 78.6 77 61.0
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 3.0e-13 78.6 77 61.0
Lsat_1_v5_gn_5_16600 Lactuca sativa HOM05D001560 ORTHO05D003613 1.1e-12 76.6 84 56.0
Lsat_1_v5_gn_3_89520 Lactuca sativa HOM05D001560 ORTHO05D003613 1.5e-12 76.3 76 59.2
Peaxi162Scf00348g00515 Petunia axillaris HOM05D001560 ORTHO05D003613 9.6e-12 73.6 77 57.1
CAN.G85.15 Capsicum annuum HOM05D001560 ORTHO05D003613 1.2e-11 73.2 72 59.7
Nitab4.5_0000307g0340 Nicotiana tabacum HOM05D001560 ORTHO05D003613 8.1e-11 70.5 77 57.1
Nitab4.5_0001152g0950 Nicotiana tabacum HOM05D001560 ORTHO05D003613 5.2e-10 67.8 72 59.7
Solyc11g030880.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 6.8e-10 67.4 59 62.7
ClCG06G008570 Citrullus lanatus HOM05D001560 ORTHO05D003613 3.4e-09 65.1 45 77.8
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-08 63.2 78 53.8
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-08 63.2 78 53.8
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-08 62.4 67 62.7
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-08 62.4 67 62.7
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-08 62.4 67 62.7
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-08 62.4 67 62.7
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-08 62.4 67 62.7
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-08 62.4 67 62.7
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-08 62.4 67 62.7
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-08 62.4 67 62.7
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-08 62.4 67 62.7
Hund29341 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-08 62.4 67 62.7
SHI35000 Sapria himalayana HOM05D001560 ORTHO05D003613 4.9e-08 61.2 77 51.9
SHI36773 Sapria himalayana HOM05D001560 ORTHO05D010994 8.4e-08 60.5 77 53.2
SHI36784 Sapria himalayana HOM05D001560 ORTHO05D010994 8.4e-08 60.5 77 53.2
SHI36270 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-07 58.9 77 50.6
GSVIVG01000512001 Vitis vinifera HOM05D001560 ORTHO05D003613 2.4e-07 58.9 61 60.7
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 3.2e-07 58.5 77 51.9
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 5.4e-07 57.8 77 50.6
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-06 56.2 65 55.4
SHI36625 Sapria himalayana HOM05D001560 ORTHO05D003613 2.1e-06 55.8 65 53.8
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 7.8e-06 53.9 65 53.8


User provided reference genes

Program Settings