Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G333 Trifolium pratense HOM05D003525 ORTHO05D004578 2.7e-101 372.1 196 100.0
Psat7g184520 Pisum sativum HOM05D003525 ORTHO05D004578 4.4e-80 301.6 179 91.1
Ca_20867_v3 Cicer arietinum L. HOM05D003525 ORTHO05D004578 6.6e-76 287.7 179 86.0
Medtr4g069960 Medicago truncatula HOM05D003525 ORTHO05D004578 1.9e-75 286.2 182 86.3
Lj1g0027431 Lotus japonicus HOM05D003525 ORTHO05D004578 1.4e-70 270.0 179 79.3
Glyma.11G118300 Glycine max HOM05D003525 ORTHO05D004578 1.9e-70 269.6 179 82.1
Lalb_Chr08g0246641 Lupinus albus HOM05D003525 ORTHO05D004578 1.2e-69 266.9 180 76.7
Glyma.12G043700 Glycine max HOM05D003525 ORTHO05D004578 2.1e-69 266.2 179 81.6
Phvul.011G045700 Phaseolus vulgaris HOM05D003525 ORTHO05D004578 6.0e-69 264.6 181 80.1
Lalb_Chr23g0265401 Lupinus albus HOM05D003525 ORTHO05D004578 1.1e-67 260.4 179 77.7
VMungo1127G1959 Vigna mungo HOM05D003525 ORTHO05D004578 2.8e-66 255.8 184 76.6
arahy.Tifrunner.gnm1.ann1.92AS0N Arachis hypogaea HOM05D003525 ORTHO05D004578 6.2e-66 254.6 179 78.8
arahy.Tifrunner.gnm1.ann1.WSY56D Arachis hypogaea HOM05D003525 ORTHO05D004578 6.2e-66 254.6 179 78.8
vmacro17495 Vaccinium macrocarpon HOM05D003525 ORTHO05D004578 8.1e-66 254.2 176 75.0
arahy.Tifrunner.gnm1.ann1.19SFKA Arachis hypogaea HOM05D003525 ORTHO05D004578 1.8e-65 253.1 179 72.1
arahy.Tifrunner.gnm1.ann1.PLG8VX Arachis hypogaea HOM05D003525 ORTHO05D004578 1.8e-65 253.1 179 72.1
QL11p043469 Quercus lobata HOM05D003525 ORTHO05D004578 2.3e-65 252.7 175 78.9
CSS0028225 Camellia sinensis var. sinensis HOM05D003525 ORTHO05D004578 1.5e-64 250.0 189 70.4
Rhsim05G0074500 Rhododendron simsii HOM05D003525 ORTHO05D004578 2.6e-64 249.2 176 72.7
Ciclev10028340m.g Citrus clementina HOM05D003525 ORTHO05D004578 7.5e-64 247.7 188 70.2
Haze_02380 Corylus avellana HOM05D003525 ORTHO05D004578 9.9e-64 247.3 175 74.9
Cfa005008 Carpinus fangiana HOM05D003525 ORTHO05D004578 1.7e-63 246.5 175 74.3
GSVIVG01031961001 Vitis vinifera HOM05D003525 ORTHO05D004578 1.7e-63 246.5 176 71.6
Atru.chr5.3008 Acer truncatum HOM05D003525 ORTHO05D004578 2.2e-63 246.1 182 72.5
Cc02_g17610 Coffea canephora HOM05D003525 ORTHO05D004578 2.2e-63 246.1 189 68.8
Eucgr.I01265 Eucalyptus grandis HOM05D003525 ORTHO05D004578 2.2e-63 246.1 191 70.7
CsaV3_2G014670 Cucumis sativus L. HOM05D003525 ORTHO05D004578 2.9e-63 245.7 182 72.0
Sed0023087 Sechium edule HOM05D003525 ORTHO05D004578 3.7e-63 245.4 185 70.8
Lj9A369G67 Lonicera japonica HOM05D003525 ORTHO05D004578 4.9e-63 245.0 181 70.2
TWI31G1364 Tripterygium wilfordii HOM05D003525 ORTHO05D004578 4.9e-63 245.0 176 68.8
ClCG11G004450 Citrullus lanatus HOM05D003525 ORTHO05D004578 6.4e-63 244.6 181 71.3
DCAR_022933 Daucus carota HOM05D003525 ORTHO05D004578 6.4e-63 244.6 176 72.2
TWI79G1197 Tripterygium wilfordii HOM05D003525 ORTHO05D004578 6.4e-63 244.6 176 71.0
Peaxi162Scf00003g01338 Petunia axillaris HOM05D003525 ORTHO05D004578 1.1e-62 243.8 176 71.0
Prupe.8G097900 Prunus persica HOM05D003525 ORTHO05D004578 1.1e-62 243.8 178 70.8
Actinidia00521 Actinidia chinensis HOM05D003525 ORTHO05D004578 1.4e-62 243.4 176 76.7
Actinidia17817 Actinidia chinensis HOM05D003525 ORTHO05D004578 1.4e-62 243.4 176 72.2
MELO3C020978.2 Cucumis melo HOM05D003525 ORTHO05D004578 1.4e-62 243.4 188 70.2
MD05G1067200 Malus domestica HOM05D003525 ORTHO05D004578 1.4e-62 243.4 179 72.1
Sopen10g023030 Solanum pennellii HOM05D003525 ORTHO05D004578 1.4e-62 243.4 176 71.6
TAR381G1436 Trochodendron aralioides HOM05D003525 ORTHO05D004578 4.1e-62 241.9 195 69.7
CSS0001193 Camellia sinensis var. sinensis HOM05D003525 ORTHO05D004578 7.1e-62 241.1 178 69.7
Dinv42068 Davidia involucrata HOM05D003525 ORTHO05D004578 7.1e-62 241.1 176 71.0
Sabra09G0088700 Salix brachista HOM05D003525 ORTHO05D004578 7.1e-62 241.1 182 68.7
TAR376G0071 Trochodendron aralioides HOM05D003525 ORTHO05D004578 7.1e-62 241.1 180 70.0
Solyc10g051340.2 Solanum lycopersicum HOM05D003525 ORTHO05D004578 9.2e-62 240.7 176 68.2
PSO210G1867 Papaver somniferum HOM05D003525 ORTHO05D004578 1.6e-61 240.0 193 68.4
Duzib132G0954 Durio zibethinus HOM05D003525 ORTHO05D004578 2.1e-61 239.6 186 67.7
Sc18g0004490 Simmondsia chinensis HOM05D003525 ORTHO05D004578 2.7e-61 239.2 176 66.5
PGSC0003DMG400033911 Solanum tuberosum HOM05D003525 ORTHO05D004578 2.7e-61 239.2 176 71.0
Migut.N01237 Erythranthe guttata HOM05D003525 ORTHO05D004578 3.5e-61 238.8 187 66.3
Sed0019550 Sechium edule HOM05D003525 ORTHO05D004578 4.6e-61 238.4 195 65.6
MSTRG.20085 Avicennia marina HOM05D003525 ORTHO05D004578 6.0e-61 238.0 179 69.3
Dinv23526 Davidia involucrata HOM05D003525 ORTHO05D004578 6.0e-61 238.0 176 71.0
Duzib248G1434 Durio zibethinus HOM05D003525 ORTHO05D004578 6.0e-61 238.0 186 68.3
PSO731G0006 Papaver somniferum HOM05D003525 ORTHO05D004578 7.8e-61 237.7 193 67.9
MD10G1076900 Malus domestica HOM05D003525 ORTHO05D004578 1.0e-60 237.3 191 66.0
Nitab4.5_0005152g0050 Nicotiana tabacum HOM05D003525 ORTHO05D004578 1.0e-60 237.3 176 70.5
Potri.009G115500 Populus trichocarpa HOM05D003525 ORTHO05D004578 1.0e-60 237.3 174 69.5
CANSAT01G0222 Cannabis sativa HOM05D003525 ORTHO05D004578 1.7e-60 236.5 177 71.2
Duzib052G0238 Durio zibethinus HOM05D003525 ORTHO05D004578 1.7e-60 236.5 199 62.8
Gohir.D02G215300 Gossypium hirsutum HOM05D003525 ORTHO05D004578 3.0e-60 235.7 186 62.9
Peaxi162Scf00016g00826 Petunia axillaris HOM05D003525 ORTHO05D004578 3.9e-60 235.3 176 66.5
CAN.G1412.2 Capsicum annuum HOM05D003525 ORTHO05D004578 5.1e-60 235.0 176 68.2
PGR142G1190 Punica granatum HOM05D003525 ORTHO05D004578 6.6e-60 234.6 180 68.9
Nitab4.5_0001361g0240 Nicotiana tabacum HOM05D003525 ORTHO05D004578 8.6e-60 234.2 176 69.3
RcHm_v2.0_Chr6g0264151 Rosa chinensis HOM05D003525 ORTHO05D004578 8.6e-60 234.2 178 68.0
Lsat_1_v5_gn_5_118620 Lactuca sativa HOM05D003525 ORTHO05D004578 1.1e-59 233.8 203 59.1
THA.LOC104807320 Tarenaya hassleriana HOM05D003525 ORTHO05D004578 1.1e-59 233.8 181 68.5
Thecc.02G086000 Theobroma cacao HOM05D003525 ORTHO05D004578 1.5e-59 233.4 181 68.0
Aqoxy6G01092 Aquilegia oxysepala HOM05D003525 ORTHO05D004578 1.9e-59 233.0 182 70.9
EL10Ac9g21728 Beta vulgaris HOM05D003525 ORTHO05D004578 1.9e-59 233.0 182 67.0
CAN.G1.44 Capsicum annuum HOM05D003525 ORTHO05D004578 1.9e-59 233.0 177 67.2
FAN27G1229 Fragaria x ananassa HOM05D003525 ORTHO05D004578 1.9e-59 233.0 178 69.1
COL.COLO4_25923 Corchorus olitorius HOM05D003525 ORTHO05D004578 2.5e-59 232.6 192 65.6
FvH4_2g08710 Fragaria vesca HOM05D003525 ORTHO05D004578 2.5e-59 232.6 178 69.1
FAN20G1110 Fragaria x ananassa HOM05D003525 ORTHO05D004578 2.5e-59 232.6 178 66.9
FAN24G2203 Fragaria x ananassa HOM05D003525 ORTHO05D004578 2.5e-59 232.6 178 69.1
MBI19_g07191_MAGBIO Magnolia biondii HOM05D003525 ORTHO05D004578 2.5e-59 232.6 190 62.6
Nn5g29579 Nelumbo nucifera HOM05D003525 ORTHO05D004578 2.5e-59 232.6 185 68.1
ECA234G0118 Erigeron canadensis HOM05D003525 ORTHO05D004578 4.3e-59 231.9 181 65.2
SalBow6G0296 Salvia bowleyana HOM05D003525 ORTHO05D004578 4.3e-59 231.9 176 68.8
SalBow6G6569 Salvia bowleyana HOM05D003525 ORTHO05D004578 4.3e-59 231.9 176 68.8
TAR628G1296 Trochodendron aralioides HOM05D003525 ORTHO05D004578 4.3e-59 231.9 178 66.9
FAN15G1113 Fragaria x ananassa HOM05D003525 ORTHO05D004578 5.6e-59 231.5 178 68.5
Solyc01g109580.4 Solanum lycopersicum HOM05D003525 ORTHO05D004578 5.6e-59 231.5 176 67.0
Sopen01g051770 Solanum pennellii HOM05D003525 ORTHO05D004578 5.6e-59 231.5 176 67.0
Aa31LG8G13620 Aethionema arabicum HOM05D003525 ORTHO05D004578 9.5e-59 230.7 183 67.8
Gohir.D13G033000 Gossypium hirsutum HOM05D003525 ORTHO05D004578 9.5e-59 230.7 185 67.6
HanXRQChr10g0307161 Helianthus annuus HOM05D003525 ORTHO05D004578 9.5e-59 230.7 199 60.3
A01p03970 Brassica napus HOM05D003525 ORTHO05D004578 2.1e-58 229.6 180 65.6
BolC1t00417H Brassica oleracea HOM05D003525 ORTHO05D004578 2.1e-58 229.6 180 65.6
BraA01t00384Z Brassica rapa HOM05D003525 ORTHO05D004578 2.1e-58 229.6 180 65.6
Gohir.A03G194200 Gossypium hirsutum HOM05D003525 ORTHO05D004578 2.8e-58 229.2 186 61.8
PSO675G1462 Papaver somniferum HOM05D003525 ORTHO05D004578 2.8e-58 229.2 185 61.6
Nn1g05019 Nelumbo nucifera HOM05D003525 ORTHO05D004578 3.6e-58 228.8 181 65.2
HanXRQChr13g0410301 Helianthus annuus HOM05D003525 ORTHO05D004578 4.7e-58 228.4 180 66.1
SGA_v2.0_scaffold58G20536 Striga asiatica HOM05D003525 ORTHO05D004578 4.7e-58 228.4 187 64.7
BcaB03g11830 Brassica carinata HOM05D003525 ORTHO05D004578 6.2e-58 228.0 180 67.8
Ah.01g019420 Amaranthus hybridus HOM05D003525 ORTHO05D004578 8.1e-58 227.6 181 64.6
CiPaw.06G135700 Carya illinoinensis HOM05D003525 ORTHO05D004578 8.1e-58 227.6 181 71.8
Oeu020764.1 Olea europaea HOM05D003525 ORTHO05D004578 8.1e-58 227.6 176 68.2
BcaC01g00903 Brassica carinata HOM05D003525 ORTHO05D004578 1.1e-57 227.3 180 65.6
A08p16780 Brassica napus HOM05D003525 ORTHO05D004578 1.1e-57 227.3 180 65.6
BraA08t33643Z Brassica rapa HOM05D003525 ORTHO05D004578 1.1e-57 227.3 180 65.6
CiPaw.05G064000 Carya illinoinensis HOM05D003525 ORTHO05D004578 1.4e-57 226.9 175 72.6
Gorai.005G243200 Gossypium raimondii HOM05D003525 ORTHO05D004578 1.8e-57 226.5 186 61.3
C01p04280 Brassica napus HOM05D003525 ORTHO05D004578 2.4e-57 226.1 179 65.4
Gohir.A13G034600 Gossypium hirsutum HOM05D003525 ORTHO05D004578 2.4e-57 226.1 198 61.6
Sp7g32280 Schrenkiella parvula HOM05D003525 ORTHO05D004578 2.4e-57 226.1 180 65.6
ClCG02G005050 Citrullus lanatus HOM05D003525 ORTHO05D004578 5.2e-57 224.9 176 64.2
Manes.15G163700 Manihot esculenta HOM05D003525 ORTHO05D004578 5.2e-57 224.9 190 59.5
Manes.17G100700 Manihot esculenta HOM05D003525 ORTHO05D004578 5.2e-57 224.9 189 64.0
Gorai.013G037400 Gossypium raimondii HOM05D003525 ORTHO05D004578 6.8e-57 224.6 197 61.4
PGSC0003DMG400000723 Solanum tuberosum HOM05D003525 ORTHO05D004578 6.8e-57 224.6 176 65.3
BcaNung06262 Brassica carinata HOM05D003525 ORTHO05D004578 8.9e-57 224.2 179 65.4
Potri.004G153900 Populus trichocarpa HOM05D003525 ORTHO05D004578 8.9e-57 224.2 174 71.8
HanXRQChr16g0505731 Helianthus annuus HOM05D003525 ORTHO05D004578 1.5e-56 223.4 180 68.3
Oeu003718.1 Olea europaea HOM05D003525 ORTHO05D004578 1.5e-56 223.4 179 69.3
PSO541G1852 Papaver somniferum HOM05D003525 ORTHO05D004578 1.5e-56 223.4 185 63.2
Thhalv10025082m.g Eutrema salsugineum HOM05D003525 ORTHO05D004578 2.0e-56 223.0 180 65.6
THA.LOC104819606 Tarenaya hassleriana HOM05D003525 ORTHO05D004578 2.0e-56 223.0 181 66.9
C03p85740 Brassica napus HOM05D003525 ORTHO05D004578 2.6e-56 222.6 180 66.1
BolC3t20862H Brassica oleracea HOM05D003525 ORTHO05D004578 2.6e-56 222.6 180 66.1
CARHR242770 Cardamine hirsuta HOM05D003525 ORTHO05D004578 3.4e-56 222.2 182 63.7
ECA236G3498 Erigeron canadensis HOM05D003525 ORTHO05D004578 3.4e-56 222.2 180 65.6
AT4G34490 Arabidopsis thaliana HOM05D003525 ORTHO05D004578 4.4e-56 221.9 180 66.7
AUR62011328 Chenopodium quinoa HOM05D003525 ORTHO05D004578 4.4e-56 221.9 174 64.4
MBI16_g38644_MAGBIO Magnolia biondii HOM05D003525 ORTHO05D004578 4.4e-56 221.9 173 67.1
Hund06230 Selenicereus undatus HOM05D003525 ORTHO05D004578 4.4e-56 221.9 176 64.8
AUR62016732 Chenopodium quinoa HOM05D003525 ORTHO05D004578 5.8e-56 221.5 174 63.8
Lsat_1_v5_gn_7_89340 Lactuca sativa HOM05D003525 ORTHO05D004578 5.8e-56 221.5 181 64.6
Lj5A197T61 Lonicera japonica HOM05D003525 ORTHO05D004578 5.8e-56 221.5 179 62.0
Nitab4.5_0000308g0040 Nicotiana tabacum HOM05D003525 ORTHO05D004578 7.6e-56 221.1 176 65.3
Migut.B00240 Erythranthe guttata HOM05D003525 ORTHO05D004578 1.3e-55 220.3 191 67.0
Sed0027089 Sechium edule HOM05D003525 ORTHO05D004578 1.7e-55 219.9 176 60.8
CsaV3_7G023520 Cucumis sativus L. HOM05D003525 ORTHO05D004578 2.2e-55 219.5 175 64.6
Carub.0007s0581 Capsella rubella HOM05D003525 ORTHO05D004578 3.8e-55 218.8 180 66.1
MELO3C012526.2 Cucumis melo HOM05D003525 ORTHO05D004578 8.4e-55 217.6 176 63.1
AL7G16740 Arabidopsis lyrata HOM05D003525 ORTHO05D004578 4.2e-54 215.3 193 60.6
Sabra04G0102300 Salix brachista HOM05D003525 ORTHO05D004578 4.2e-54 215.3 180 68.3
unitig_8.g3568 Utricularia gibba HOM05D003525 ORTHO05D004578 4.2e-54 215.3 176 61.9
ATR0733G133 Amborella trichopoda HOM05D003525 ORTHO05D004578 7.1e-54 214.5 179 66.5
Oeu029126.1 Olea europaea HOM05D003525 ORTHO05D004578 9.2e-54 214.2 180 61.7
Aa31LG2G16030 Aethionema arabicum HOM05D003525 ORTHO05D004578 7.8e-53 211.1 182 67.6
vmacro02112 Vaccinium macrocarpon HOM05D003525 ORTHO05D004578 1.0e-52 210.7 227 50.7
Zm00001eb055650 Zea mays HOM05D003525 ORTHO05D004578 1.3e-52 210.3 189 59.8
Aqoxy5G01649 Aquilegia oxysepala HOM05D003525 ORTHO05D004578 1.7e-52 209.9 181 66.3
unitig_22.g5174 Utricularia gibba HOM05D003525 ORTHO05D004578 2.3e-52 209.5 174 59.8
Zm00001eb215890 Zea mays HOM05D003525 ORTHO05D004578 3.9e-52 208.8 176 60.8
DCAR_028988 Daucus carota HOM05D003525 ORTHO05D004578 8.7e-52 207.6 211 52.6
HanXRQChr04g0127991 Helianthus annuus HOM05D003525 ORTHO05D004578 8.7e-52 207.6 180 66.1
CDE07G1879 Ceratophyllum demersum HOM05D003525 ORTHO05D004578 1.1e-51 207.2 200 55.5
MELO3C014785.2 Cucumis melo HOM05D003525 ORTHO05D004578 4.3e-51 205.3 127 76.4
HPP92_017152 Vanilla planifolia HOM05D003525 ORTHO05D004578 8.1e-50 201.1 183 57.9
Os08g0447900 Oryza sativa ssp. japonica HOM05D003525 ORTHO05D004578 5.3e-49 198.4 187 57.2
Zm00001eb040800 Zea mays HOM05D003525 ORTHO05D004578 5.3e-49 198.4 192 53.1
Os03g0722600 Oryza sativa ssp. japonica HOM05D003525 ORTHO05D004578 4.4e-48 195.3 190 54.7
SEGI_09930 Sequoiadendron giganteum HOM05D003525 ORTHO05D004578 5.1e-44 181.8 184 56.5
Mapoly0074s0004 Marchantia polymorpha HOM05D003525 ORTHO05D004578 4.3e-43 178.7 140 56.4
Pp3c4_1720 Physcomitrium patens HOM05D003525 ORTHO05D004578 1.1e-41 174.1 144 54.9
MELO3C019736.2 Cucumis melo HOM05D003525 ORTHO05D004578 2.4e-41 172.9 127 66.1
AagrBONN_evm.TU.Sc2ySwM_344.2699 Anthoceros agrestis HOM05D003525 ORTHO05D004578 5.1e-36 155.2 128 53.1
CBR_g21060 Chara braunii HOM05D003525 ORTHO05D004578 1.2e-32 144.1 134 49.3
SMO174G0095 Selaginella moellendorffii HOM05D003525 ORTHO05D004578 4.2e-30 135.6 133 45.1
PRCOL_00002324 Prasinoderma coloniale HOM05D003525 ORTHO05D004578 6.0e-29 131.7 189 43.9
TPR.G14489 Trifolium pratense HOM05D003525 ORTHO05D004578 5.6e-27 125.2 70 91.4
Actinidia27897 Actinidia chinensis HOM05D003525 ORTHO05D004578 1.1e-25 120.9 70 81.4
MCO10G181 Micromonas commoda HOM05D003525 ORTHO05D004578 1.4e-25 120.6 174 36.2
HPP92_017436 Vanilla planifolia HOM05D000653 ORTHO05D002177 1.0e-23 114.4 81 69.1
Cpa.g.sc62.144 Carica papaya HOM05D003525 ORTHO05D004578 9.3e-22 107.8 101 63.4
Cre06.g304100 Chlamydomonas reinhardtii HOM05D003525 ORTHO05D004578 2.2e-18 96.7 134 37.3
ECA234G4333 Erigeron canadensis HOM05D003525 ORTHO05D004578 9.0e-17 91.3 58 69.0
Atru.chr7.1490 Acer truncatum HOM05D003525 ORTHO05D037886 4.5e-16 89.0 57 73.7
Nitab4.5_0004172g0090 Nicotiana tabacum HOM05D003525 ORTHO05D004578 8.5e-15 84.7 57 68.4
Actinidia27898 Actinidia chinensis HOM05D003525 ORTHO05D004578 2.2e-10 70.1 97 52.6
C07p60610 Brassica napus HOM05D003525 ORTHO05D019487 2.0e-08 63.5 36 72.2
MBI16_g46919_MAGBIO Magnolia biondii HOM05D003525 ORTHO05D037886 1.1e-06 57.8 40 65.0


User provided reference genes

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