Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33285 Trifolium pratense HOM05D003450 ORTHO05D004150 1.5e-77 292.7 148 100.0
TPR.G31948 Trifolium pratense HOM05D003450 ORTHO05D004150 1.3e-31 140.2 353 33.1
arahy.Tifrunner.gnm1.ann1.F3BVF1 Arachis hypogaea HOM05D003450 ORTHO05D004150 1.1e-30 137.1 318 34.0
Medtr6g004510 Medicago truncatula HOM05D003450 ORTHO05D004150 3.5e-29 132.1 353 32.0
Psat1g053760 Pisum sativum HOM05D003450 ORTHO05D004150 6.0e-29 131.3 354 32.2
Ca_04147_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 1.7e-28 129.8 353 31.7
Ca_30596_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 1.7e-28 129.8 353 31.7
Glyma.19G003200 Glycine max HOM05D003450 ORTHO05D004150 1.9e-27 126.3 353 31.4
Lj2g0026665 Lotus japonicus HOM05D003450 ORTHO05D004150 1.6e-26 123.2 353 30.9
Lj5C248G9 Lonicera japonica HOM05D003450 ORTHO05D004150 4.7e-26 121.7 306 32.0
Phvul.004G005200 Phaseolus vulgaris HOM05D003450 ORTHO05D004150 4.7e-26 121.7 353 30.6
vmacro11398 Vaccinium macrocarpon HOM05D003450 ORTHO05D004150 4.7e-26 121.7 369 29.3
Glyma.19G056700 Glycine max HOM05D003450 ORTHO05D004150 1.1e-25 120.6 350 30.3
GSVIVG01000649001 Vitis vinifera HOM05D003450 ORTHO05D004150 2.3e-25 119.4 374 29.4
Lalb_Chr18g0055341 Lupinus albus HOM05D003450 ORTHO05D004150 3.1e-25 119.0 353 29.5
arahy.Tifrunner.gnm1.ann1.Q7XHAR Arachis hypogaea HOM05D003450 ORTHO05D004150 4.0e-25 118.6 353 30.3
QL02p074015 Quercus lobata HOM05D003450 ORTHO05D004150 1.2e-24 117.1 353 29.2
Potri.001G343500 Populus trichocarpa HOM05D003450 ORTHO05D004150 1.5e-24 116.7 356 29.2
QL03p035003 Quercus lobata HOM05D003450 ORTHO05D004150 5.8e-24 114.8 353 28.9
Lalb_Chr15g0086731 Lupinus albus HOM05D003450 ORTHO05D004150 1.7e-23 113.2 352 28.7
VMungo0464G1019 Vigna mungo HOM05D003450 ORTHO05D004150 1.7e-23 113.2 356 29.8
Cpa.g.sc108.76 Carica papaya HOM05D003450 ORTHO05D004150 2.9e-23 112.5 353 28.3
Haze_14757 Corylus avellana HOM05D003450 ORTHO05D004150 2.9e-23 112.5 353 28.6
Sabra16G0222800 Salix brachista HOM05D003450 ORTHO05D004150 2.9e-23 112.5 356 28.9
Cfa007340 Carpinus fangiana HOM05D003450 ORTHO05D004150 3.7e-23 112.1 353 28.6
CSS0002385 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 4.9e-23 111.7 353 28.3
TAR623G1303 Trochodendron aralioides HOM05D003450 ORTHO05D004150 4.9e-23 111.7 376 28.5
FAN02G3092 Fragaria x ananassa HOM05D003450 ORTHO05D004150 1.9e-22 109.8 350 28.6
ClCG09G019370 Citrullus lanatus HOM05D003450 ORTHO05D004150 3.2e-22 109.0 352 27.8
MD09G1023300 Malus domestica HOM05D003450 ORTHO05D004150 5.4e-22 108.2 352 28.7
CANSAT64G2043 Cannabis sativa HOM05D003450 ORTHO05D004150 7.0e-22 107.8 352 27.6
Duzib147G0628 Durio zibethinus HOM05D003450 ORTHO05D004150 7.0e-22 107.8 62 83.9
Sed0008503 Sechium edule HOM05D003450 ORTHO05D004150 9.2e-22 107.5 355 27.9
CiPaw.09G022500 Carya illinoinensis HOM05D003450 ORTHO05D004150 1.6e-21 106.7 353 28.3
CsaV3_5G027040 Cucumis sativus L. HOM05D003450 ORTHO05D004150 1.6e-21 106.7 355 27.9
FvH4_6g51710 Fragaria vesca HOM05D003450 ORTHO05D004150 1.6e-21 106.7 62 85.5
FAN14G2265 Fragaria x ananassa HOM05D003450 ORTHO05D004150 1.6e-21 106.7 62 85.5
MELO3C021591.2 Cucumis melo HOM05D003450 ORTHO05D004150 2.1e-21 106.3 355 27.6
FAN09G1073 Fragaria x ananassa HOM05D003450 ORTHO05D004150 2.1e-21 106.3 350 28.3
Peaxi162Scf00074g01921 Petunia axillaris HOM05D003450 ORTHO05D004150 2.1e-21 106.3 377 26.8
Cc08_g15080 Coffea canephora HOM05D003450 ORTHO05D004150 2.7e-21 105.9 375 26.7
Dinv37611 Davidia involucrata HOM05D003450 ORTHO05D004150 2.7e-21 105.9 373 28.2
Hma1.2p1_1136F.1_g260470 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 2.7e-21 105.9 62 85.5
Hma1.2p1_1172F.1_g263680 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 2.7e-21 105.9 62 85.5
Manes.17G111200 Manihot esculenta HOM05D003450 ORTHO05D004150 2.7e-21 105.9 62 83.9
Oeu059564.1 Olea europaea HOM05D003450 ORTHO05D004150 2.7e-21 105.9 85 63.5
Gohir.D04G058400 Gossypium hirsutum HOM05D003450 ORTHO05D004150 3.5e-21 105.5 62 83.9
Gorai.012G065100 Gossypium raimondii HOM05D003450 ORTHO05D004150 3.5e-21 105.5 62 83.9
RcHm_v2.0_Chr2g0173241 Rosa chinensis HOM05D003450 ORTHO05D004150 3.5e-21 105.5 62 83.9
Atru.chr6.2426 Acer truncatum HOM05D003450 ORTHO05D004150 4.6e-21 105.1 373 27.3
Prupe.3G293600 Prunus persica HOM05D003450 ORTHO05D004150 4.6e-21 105.1 352 29.0
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 4.6e-21 105.1 62 82.3
Duzib264G1290 Durio zibethinus HOM05D003450 ORTHO05D004150 6.0e-21 104.8 62 82.3
PGR142G3144 Punica granatum HOM05D003450 ORTHO05D004150 6.0e-21 104.8 62 83.9
Migut.E01197 Erythranthe guttata HOM05D003450 ORTHO05D004150 7.8e-21 104.4 135 48.1
MBI14_g36922_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 7.8e-21 104.4 65 80.0
THA.LOC104823952 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 7.8e-21 104.4 61 82.0
Ciclev10014189m.g Citrus clementina HOM05D003450 ORTHO05D004150 1.0e-20 104.0 62 82.3
COL.COLO4_29171 Corchorus olitorius HOM05D003450 ORTHO05D004150 1.0e-20 104.0 61 83.6
Manes.15G151800 Manihot esculenta HOM05D003450 ORTHO05D004150 1.0e-20 104.0 356 27.0
Sed0014883 Sechium edule HOM05D003450 ORTHO05D004150 1.0e-20 104.0 62 82.3
Actinidia14585 Actinidia chinensis HOM05D003450 ORTHO05D004150 1.3e-20 103.6 62 83.9
Eucgr.I01732 Eucalyptus grandis HOM05D003450 ORTHO05D004150 1.3e-20 103.6 353 27.8
Lsat_1_v5_gn_3_9121 Lactuca sativa HOM05D003450 ORTHO05D004150 1.3e-20 103.6 62 82.3
MD17G1022800 Malus domestica HOM05D003450 ORTHO05D004150 1.3e-20 103.6 352 28.1
Os12g0538900 Oryza sativa ssp. japonica HOM05D003450 ORTHO05D004150 1.3e-20 103.6 65 81.5
Lj8A217T73 Lonicera japonica HOM05D003450 ORTHO05D004150 1.7e-20 103.2 62 82.3
Thecc.04G019300 Theobroma cacao HOM05D003450 ORTHO05D004150 1.7e-20 103.2 62 82.3
TWI56G0323 Tripterygium wilfordii HOM05D003450 ORTHO05D004150 1.7e-20 103.2 62 82.3
Zm00001eb410430 Zea mays HOM05D003450 ORTHO05D004150 1.7e-20 103.2 65 81.5
BcaC06g30980 Brassica carinata HOM05D003450 ORTHO05D004150 2.3e-20 102.8 62 80.6
BcaC06g33806 Brassica carinata HOM05D003450 ORTHO05D004150 2.3e-20 102.8 62 80.6
A06p41100 Brassica napus HOM05D003450 ORTHO05D004150 2.3e-20 102.8 62 80.6
C07p36640 Brassica napus HOM05D003450 ORTHO05D004150 2.3e-20 102.8 62 80.6
BolC7t44182H Brassica oleracea HOM05D003450 ORTHO05D004150 2.3e-20 102.8 62 80.6
BraA06t27033Z Brassica rapa HOM05D003450 ORTHO05D004150 2.3e-20 102.8 62 80.6
CAN.G532.15 Capsicum annuum HOM05D003450 ORTHO05D004150 2.3e-20 102.8 62 82.3
CDE09G0700 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 2.3e-20 102.8 65 78.5
FAN05G3254 Fragaria x ananassa HOM05D003450 ORTHO05D004150 2.3e-20 102.8 62 80.6
Nn2g10559 Nelumbo nucifera HOM05D003450 ORTHO05D004150 2.3e-20 102.8 62 80.6
SGA_v2.0_scaffold76G25156 Striga asiatica HOM05D003450 ORTHO05D004150 2.3e-20 102.8 62 82.3
Aa31LG2G5130 Aethionema arabicum HOM05D003450 ORTHO05D004150 3.0e-20 102.4 62 80.6
MSTRG.11963 Avicennia marina HOM05D003450 ORTHO05D004150 3.0e-20 102.4 62 80.6
CSS0005577 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 3.0e-20 102.4 66 80.3
HanXRQChr17g0533281 Helianthus annuus HOM05D003450 ORTHO05D004150 3.0e-20 102.4 62 80.6
Hund15478 Selenicereus undatus HOM05D003450 ORTHO05D004150 3.9e-20 102.1 62 79.0
CARHR148900 Cardamine hirsuta HOM05D003450 ORTHO05D004150 5.1e-20 101.7 62 79.0
Nitab4.5_0002282g0060 Nicotiana tabacum HOM05D003450 ORTHO05D004150 5.1e-20 101.7 62 80.6
Nitab4.5_0006540g0050 Nicotiana tabacum HOM05D003450 ORTHO05D004150 5.1e-20 101.7 62 80.6
CDE02G4242 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 6.6e-20 101.3 65 76.9
Oeu042349.1 Olea europaea HOM05D003450 ORTHO05D004150 6.6e-20 101.3 85 61.2
EL10Ac5g11313 Beta vulgaris HOM05D003450 ORTHO05D004150 1.1e-19 100.5 62 77.4
PSO063G0895 Papaver somniferum HOM05D003450 ORTHO05D004150 1.1e-19 100.5 62 80.6
PSO421G0225 Papaver somniferum HOM05D003450 ORTHO05D004150 1.1e-19 100.5 62 80.6
Sopen08g029730 Solanum pennellii HOM05D003450 ORTHO05D004150 1.1e-19 100.5 62 80.6
BcaB07g30154 Brassica carinata HOM05D003450 ORTHO05D004150 1.5e-19 100.1 62 79.0
BcaC03g17471 Brassica carinata HOM05D003450 ORTHO05D004150 1.5e-19 100.1 62 79.0
A02p35530 Brassica napus HOM05D003450 ORTHO05D004150 1.5e-19 100.1 62 79.0
C02p54300 Brassica napus HOM05D003450 ORTHO05D004150 1.5e-19 100.1 62 79.0
BolC2t11498H Brassica oleracea HOM05D003450 ORTHO05D004150 1.5e-19 100.1 62 79.0
BraA02t08553Z Brassica rapa HOM05D003450 ORTHO05D004150 1.5e-19 100.1 62 79.0
ATR0068G094 Amborella trichopoda HOM05D003450 ORTHO05D004150 1.9e-19 99.8 62 79.0
PGSC0003DMG400012328 Solanum tuberosum HOM05D003450 ORTHO05D004150 1.9e-19 99.8 94 57.4
Aqoxy6G00591 Aquilegia oxysepala HOM05D003450 ORTHO05D004150 2.5e-19 99.4 62 79.0
CSS0048429 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 2.5e-19 99.4 94 55.3
Solyc08g081410.3 Solanum lycopersicum HOM05D003450 ORTHO05D004150 2.5e-19 99.4 102 54.9
AUR62009512 Chenopodium quinoa HOM05D003450 ORTHO05D004150 3.3e-19 99.0 62 75.8
ECA246G5325 Erigeron canadensis HOM05D003450 ORTHO05D004150 3.3e-19 99.0 62 79.0
THA.LOC104825318 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 3.3e-19 99.0 62 77.4
HPP92_017150 Vanilla planifolia HOM05D003450 ORTHO05D004150 5.6e-19 98.2 62 79.0
HPP92_017154 Vanilla planifolia HOM05D003450 ORTHO05D004150 5.6e-19 98.2 62 79.0
DCAR_004619 Daucus carota HOM05D003450 ORTHO05D004150 7.3e-19 97.8 61 78.7
SMO367G1196 Selaginella moellendorffii HOM05D003450 ORTHO05D004150 7.3e-19 97.8 61 73.8
Sc07g0005180 Simmondsia chinensis HOM05D003450 ORTHO05D004150 7.3e-19 97.8 62 79.0
CSS0021042 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 9.5e-19 97.4 85 58.8
Hund02491 Selenicereus undatus HOM05D003450 ORTHO05D004150 9.5e-19 97.4 318 27.7
unitig_61.g26360 Utricularia gibba HOM05D003450 ORTHO05D004150 9.5e-19 97.4 66 75.8
Ah.02g116930 Amaranthus hybridus HOM05D003450 ORTHO05D004150 1.2e-18 97.1 62 74.2
ECA233G1844 Erigeron canadensis HOM05D003450 ORTHO05D004150 1.2e-18 97.1 62 77.4
AagrBONN_evm.TU.Sc2ySwM_344.991 Anthoceros agrestis HOM05D003450 ORTHO05D004150 1.6e-18 96.7 61 72.1
AUR62034774 Chenopodium quinoa HOM05D003450 ORTHO05D004150 1.6e-18 96.7 62 74.2
Gohir.A05G354700 Gossypium hirsutum HOM05D003450 ORTHO05D004150 2.1e-18 96.3 100 55.0
SalBow8G1997 Salvia bowleyana HOM05D003450 ORTHO05D004150 2.8e-18 95.9 65 76.9
Mapoly0097s0078 Marchantia polymorpha HOM05D003450 ORTHO05D004150 4.7e-18 95.1 154 41.6
SalBow8G1100 Salvia bowleyana HOM05D003450 ORTHO05D004150 6.2e-18 94.7 85 58.8
CSS0043437 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 8.1e-18 94.4 71 67.6
Hma1.2p1_1136F.1_g260480 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 1.4e-17 93.6 80 62.5
Solyc02g075610.4 Solanum lycopersicum HOM05D003450 ORTHO05D004150 2.3e-17 92.8 85 56.5
Pp3c3_27420 Physcomitrium patens HOM05D003450 ORTHO05D004150 1.5e-16 90.1 61 67.2
PSO210G4892 Papaver somniferum HOM05D003450 ORTHO05D004150 2.0e-16 89.7 117 48.7
PSO210G3071 Papaver somniferum HOM05D003450 ORTHO05D004150 2.6e-16 89.4 117 48.7
AL5G16950 Arabidopsis lyrata HOM05D003450 ORTHO05D004150 7.5e-16 87.8 102 48.0
CAN.G293.1 Capsicum annuum HOM05D003450 ORTHO05D004150 7.5e-16 87.8 66 65.2
AT3G27530 Arabidopsis thaliana HOM05D003450 ORTHO05D004150 1.3e-15 87.0 102 48.0
MBI14_g35409_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 1.3e-15 87.0 68 61.8
Sp2g16700 Schrenkiella parvula HOM05D003450 ORTHO05D004150 2.2e-15 86.3 102 48.0
Carub.0005s0596 Capsella rubella HOM05D003450 ORTHO05D004150 3.7e-15 85.5 102 48.0
Solyc02g084490.1 Solanum lycopersicum HOM05D003450 ORTHO05D004150 4.9e-15 85.1 58 69.0
CSS0024266 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 6.4e-15 84.7 54 77.8
Thhalv10003626m.g Eutrema salsugineum HOM05D003450 ORTHO05D004150 1.9e-14 83.2 47 87.2
CBR_g57070 Chara braunii HOM05D003450 ORTHO05D004150 2.4e-14 82.8 60 61.7
MCO05G130 Micromonas commoda HOM05D003450 ORTHO05D004150 2.1e-13 79.7 134 35.1
Actinidia28359 Actinidia chinensis HOM05D003450 ORTHO05D004150 3.5e-13 79.0 84 53.6
Gohir.D07G231100 Gossypium hirsutum HOM05D003450 ORTHO05D004150 3.5e-13 79.0 71 60.6
arahy.Tifrunner.gnm1.ann1.ST064T Arachis hypogaea HOM05D003450 ORTHO05D004150 5.1e-12 75.1 52 76.9
MBI14_g31103_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 6.6e-12 74.7 92 46.7
Dinv38912 Davidia involucrata HOM05D003450 ORTHO05D004150 2.5e-11 72.8 43 83.7
Cfa023435 Carpinus fangiana HOM05D003450 ORTHO05D125710 5.6e-11 71.6 61 57.4
Cre06.g271950 Chlamydomonas reinhardtii HOM05D003450 ORTHO05D004150 1.1e-09 67.4 53 54.7
PRCOL_00005576 Prasinoderma coloniale HOM05D003450 ORTHO05D004150 1.4e-09 67.0 74 47.3
Gohir.A05G354750 Gossypium hirsutum HOM05D003450 ORTHO05D004150 8.9e-09 64.3 38 81.6
arahy.Tifrunner.gnm1.ann1.84ZZZT Arachis hypogaea HOM05D003450 ORTHO05D026894 2.6e-08 62.8 43 69.8
Zm00001eb137680 Zea mays HOM05D003450 ORTHO05D004150 5.8e-08 61.6 82 34.1
arahy.Tifrunner.gnm1.ann1.CAW9WT Arachis hypogaea HOM05D003450 ORTHO05D026894 1.3e-07 60.5 41 70.7
arahy.Tifrunner.gnm1.ann1.F4W2B8 Arachis hypogaea HOM05D003450 ORTHO05D004150 1.7e-07 60.1 42 69.0
arahy.Tifrunner.gnm1.ann1.D2JCSM Arachis hypogaea HOM05D003450 ORTHO05D026894 2.9e-07 59.3 35 80.0
CAN.G1274.36 Capsicum annuum HOM05D003450 ORTHO05D004150 2.9e-07 59.3 58 56.9


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