Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33280 Trifolium pratense HOM05D011644 ORTHO05D010142 3.2e-69 265.0 137 100.0
Medtr8g469260 Medicago truncatula HOM05D011644 ORTHO05D010142 1.4e-48 196.4 138 79.0
Psat4g132160 Pisum sativum HOM05D011644 ORTHO05D010142 7.7e-47 190.7 137 76.6
Glyma.06G253800 Glycine max HOM05D011644 ORTHO05D010142 9.4e-45 183.7 137 73.7
Phvul.011G154700 Phaseolus vulgaris HOM05D011644 ORTHO05D010142 3.0e-43 178.7 137 73.0
VMungo1127G1310 Vigna mungo HOM05D011644 ORTHO05D010142 3.0e-43 178.7 137 73.0
Glyma.12G147600 Glycine max HOM05D011644 ORTHO05D010142 3.9e-43 178.3 137 73.0
Lj3g0010461 Lotus japonicus HOM05D011644 ORTHO05D010142 6.3e-41 171.0 139 73.4
Lalb_Chr19g0134471 Lupinus albus HOM05D011644 ORTHO05D010142 4.7e-36 154.8 136 61.8
Atru.chr2.2829 Acer truncatum HOM05D008538 ORTHO05D010142 2.2e-14 82.8 129 44.2
CSS0013852 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 7.2e-13 77.8 135 42.2
CSS0046110 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 7.2e-13 77.8 135 42.2
Prupe.4G189200 Prunus persica HOM05D008538 ORTHO05D010142 2.1e-12 76.3 133 39.8
MD03G1219700 Malus domestica HOM05D008538 ORTHO05D010142 3.6e-12 75.5 124 42.7
Ciclev10010245m.g Citrus clementina HOM05D008538 ORTHO05D010142 2.0e-10 69.7 135 38.5
Dinv08337 Davidia involucrata HOM05D008538 ORTHO05D010142 7.5e-10 67.8 133 36.8
Hma1.2p1_1003F.1_g246760 Hydrangea macrophylla HOM05D008538 ORTHO05D010142 9.8e-10 67.4 128 40.6
Cfa020514 Carpinus fangiana HOM05D008538 ORTHO05D010142 3.7e-09 65.5 136 39.0
Haze_09520 Corylus avellana HOM05D008538 ORTHO05D010142 3.7e-09 65.5 136 39.0
FvH4_3g20870 Fragaria vesca HOM05D008538 ORTHO05D010142 4.8e-09 65.1 133 37.6
FAN11G3526 Fragaria x ananassa HOM05D008538 ORTHO05D010142 4.8e-09 65.1 133 37.6
Actinidia18751 Actinidia chinensis HOM05D008538 ORTHO05D010142 6.3e-09 64.7 127 39.4
FAN21G1320 Fragaria x ananassa HOM05D008538 ORTHO05D010142 4.1e-08 62.0 133 36.8
TWI39G0570 Tripterygium wilfordii HOM05D008538 ORTHO05D010142 7.0e-08 61.2 128 39.1
Cc05_g12630 Coffea canephora HOM05D008538 ORTHO05D010142 9.1e-08 60.8 127 36.2
Duzib268G1845 Durio zibethinus HOM05D019219 ORTHO05D010142 2.0e-07 59.7 134 37.3
FAN25G2351 Fragaria x ananassa HOM05D001272 ORTHO05D001843 4.5e-07 58.5 132 34.1
QL08p018693 Quercus lobata HOM05D008538 ORTHO05D010142 4.5e-07 58.5 134 35.1
ClCG10G006550 Citrullus lanatus HOM05D008538 ORTHO05D010142 5.9e-07 58.2 127 35.4
PGSC0003DMG400025004 Solanum tuberosum HOM05D008538 ORTHO05D010142 1.0e-06 57.4 129 35.7
MELO3C016550.2 Cucumis melo HOM05D008538 ORTHO05D010142 1.7e-06 56.6 129 34.9
Nitab4.5_0000662g0010 Nicotiana tabacum HOM05D008538 ORTHO05D010142 1.7e-06 56.6 126 34.9
CsaV3_3G006000 Cucumis sativus L. HOM05D008538 ORTHO05D010142 2.3e-06 56.2 137 33.6
Nitab4.5_0000207g0250 Nicotiana tabacum HOM05D008538 ORTHO05D010142 2.3e-06 56.2 128 35.2
Sed0026392 Sechium edule HOM05D008538 ORTHO05D010142 2.3e-06 56.2 127 34.6
Thecc.07G072500 Theobroma cacao HOM05D019219 ORTHO05D010142 5.0e-06 55.1 134 35.1
CAN.G1320.13 Capsicum annuum HOM05D008538 ORTHO05D010142 6.6e-06 54.7 128 35.9
Sopen12g006890 Solanum pennellii HOM05D008538 ORTHO05D010142 6.6e-06 54.7 130 31.5
QL93p2023_0080 Quercus lobata HOM05D008538 ORTHO05D010142 8.6e-06 54.3 137 32.8


User provided reference genes

Program Settings