Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33274 Trifolium pratense HOM05D036591 ORTHO05D021505 1.2e-36 156.0 76 100.0
TPR.G19001 Trifolium pratense HOM05D000131 ORTHO05D021505 2.4e-34 148.3 75 94.7
TPR.G33273 Trifolium pratense HOM05D000131 ORTHO05D000086 2.5e-31 138.3 75 88.0
Psat4g130400 Pisum sativum HOM05D000131 ORTHO05D000086 2.3e-24 115.2 75 69.3
Medtr8g468980 Medicago truncatula HOM05D000131 ORTHO05D000086 3.6e-22 107.8 75 65.3
Ca_22860_v3 Cicer arietinum L. HOM05D000131 ORTHO05D000086 3.1e-21 104.8 75 65.3
Psat4g129680 Pisum sativum HOM05D000131 ORTHO05D000086 8.3e-19 96.7 59 72.9
Psat4g132200 Pisum sativum HOM05D000131 ORTHO05D000086 7.1e-18 93.6 59 69.5
Phvul.003G069100 Phaseolus vulgaris HOM05D000131 ORTHO05D000086 1.2e-14 82.8 67 56.7
VMungo0251G3109 Vigna mungo HOM05D000131 ORTHO05D000086 2.1e-14 82.0 75 50.7
Lalb_Chr09g0335461 Lupinus albus HOM05D000131 ORTHO05D000086 4.0e-13 77.8 72 54.2
Glyma.08G296900 Glycine max HOM05D000131 ORTHO05D000086 5.8e-12 73.9 75 45.3
Lalb_Chr10g0098001 Lupinus albus HOM05D000131 ORTHO05D000086 1.3e-11 72.8 73 49.3
arahy.Tifrunner.gnm1.ann1.UP8RD4 Arachis hypogaea HOM05D000131 ORTHO05D000086 1.1e-10 69.7 69 46.4
arahy.Tifrunner.gnm1.ann1.T4WMV3 Arachis hypogaea HOM05D000131 ORTHO05D000086 1.4e-10 69.3 69 46.4
arahy.Tifrunner.gnm1.ann1.243YXU Arachis hypogaea HOM05D036591 ORTHO05D021505 7.1e-10 67.0 76 46.1
arahy.Tifrunner.gnm1.ann1.T5VT52 Arachis hypogaea HOM05D036591 ORTHO05D021505 9.2e-10 66.6 76 46.1
Ca_04745_v3 Cicer arietinum L. HOM05D000131 ORTHO05D000086 1.6e-09 65.9 73 47.9
Lj2g0004378 Lotus japonicus HOM05D000131 ORTHO05D000086 2.7e-09 65.1 68 44.1
Psat2g124680 Pisum sativum HOM05D000131 ORTHO05D000086 2.7e-09 65.1 76 42.1
Lalb_Chr17g0340401 Lupinus albus HOM05D000131 ORTHO05D000086 7.8e-09 63.5 68 42.6
Psat2g124640 Pisum sativum HOM05D000131 ORTHO05D000086 1.1e-07 59.7 76 38.2
Glyma.01G042700 Glycine max HOM05D000131 ORTHO05D000086 1.5e-07 59.3 77 41.6
Glyma.02G020600 Glycine max HOM05D000131 ORTHO05D000086 3.3e-07 58.2 76 42.1
arahy.Tifrunner.gnm1.ann1.I4KDIP Arachis hypogaea HOM05D000131 ORTHO05D000086 5.6e-07 57.4 76 42.1
arahy.Tifrunner.gnm1.ann1.3F0YT4 Arachis hypogaea HOM05D000131 ORTHO05D000086 7.3e-07 57.0 76 40.8
arahy.Tifrunner.gnm1.ann1.KBL0GR Arachis hypogaea HOM05D000131 ORTHO05D000086 7.3e-07 57.0 76 40.8
arahy.Tifrunner.gnm1.ann1.H7GLLK Arachis hypogaea HOM05D000131 ORTHO05D000086 9.6e-07 56.6 76 42.1
Medtr5g038510 Medicago truncatula HOM05D000131 ORTHO05D000086 3.6e-06 54.7 76 35.5
Medtr5g038490 Medicago truncatula HOM05D000131 ORTHO05D000086 6.2e-06 53.9 76 38.2
Psat2g123040 Pisum sativum HOM05D000131 ORTHO05D000086 6.2e-06 53.9 76 31.6


User provided reference genes

Program Settings