Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33192 Trifolium pratense HOM05D004239 ORTHO05D410682 1.4e-55 219.5 122 100.0
Psat3g010600 Pisum sativum HOM05D004239 ORTHO05D005191 2.8e-08 62.4 78 51.3
TPR.G33198 Trifolium pratense HOM05D004239 ORTHO05D005191 3.7e-08 62.0 78 51.3
Medtr7g113660 Medicago truncatula HOM05D004239 ORTHO05D005191 1.4e-07 60.1 74 51.4
Nitab4.5_0005388g0060 Nicotiana tabacum HOM05D004239 ORTHO05D005191 1.8e-07 59.7 78 48.7
Nitab4.5_0002031g0070 Nicotiana tabacum HOM05D004239 ORTHO05D005191 2.4e-07 59.3 78 48.7
SalBow3G0110 Salvia bowleyana HOM05D004239 ORTHO05D005191 2.4e-07 59.3 87 46.0
CAN.G1077.21 Capsicum annuum HOM05D004239 ORTHO05D005191 4.0e-07 58.5 78 47.4
PGSC0003DMG401028586 Solanum tuberosum HOM05D004239 ORTHO05D005191 4.0e-07 58.5 78 47.4
MSTRG.5107 Avicennia marina HOM05D004239 ORTHO05D005191 5.3e-07 58.2 86 44.2
Actinidia19795 Actinidia chinensis HOM05D004239 ORTHO05D005191 6.9e-07 57.8 78 48.7
Ca_09364_v3 Cicer arietinum L. HOM05D004239 ORTHO05D005191 6.9e-07 57.8 78 48.7
Oeu027738.1 Olea europaea HOM05D004239 ORTHO05D005191 6.9e-07 57.8 78 47.4
SGA_v2.0_scaffold81G26082 Striga asiatica HOM05D004239 ORTHO05D005191 6.9e-07 57.8 86 43.0
Cc00_g15600 Coffea canephora HOM05D004239 ORTHO05D005191 9.0e-07 57.4 79 49.4
RcHm_v2.0_Chr3g0454501 Rosa chinensis HOM05D004239 ORTHO05D005191 9.0e-07 57.4 78 48.7
Solyc01g098840.3 Solanum lycopersicum HOM05D004239 ORTHO05D005191 9.0e-07 57.4 78 46.2
Actinidia05711 Actinidia chinensis HOM05D004239 ORTHO05D005191 1.2e-06 57.0 78 46.2
Sopen01g042380 Solanum pennellii HOM05D004239 ORTHO05D005191 1.2e-06 57.0 78 46.2
MD04G1206900 Malus domestica HOM05D004239 ORTHO05D005191 1.5e-06 56.6 78 51.3
GSVIVG01000037001 Vitis vinifera HOM05D004239 ORTHO05D005191 1.5e-06 56.6 78 47.4
Haze_04207 Corylus avellana HOM05D004239 ORTHO05D005191 2.0e-06 56.2 79 48.1
Rhsim05G0142700 Rhododendron simsii HOM05D004239 ORTHO05D005191 2.0e-06 56.2 78 47.4
Eucgr.B01993 Eucalyptus grandis HOM05D004239 ORTHO05D005191 2.6e-06 55.8 80 50.0
RcHm_v2.0_Chr7g0220931 Rosa chinensis HOM05D004239 ORTHO05D005191 2.6e-06 55.8 87 43.7
TAR636G0428 Trochodendron aralioides HOM05D004239 ORTHO05D005191 2.6e-06 55.8 83 43.4
unitig_0.g2376 Utricularia gibba HOM05D004239 ORTHO05D005191 2.6e-06 55.8 78 46.2
Actinidia23624 Actinidia chinensis HOM05D004239 ORTHO05D005191 3.4e-06 55.5 78 47.4
Cpa.g.sc48.35 Carica papaya HOM05D004239 ORTHO05D005191 3.4e-06 55.5 79 46.8
Cfa006576 Carpinus fangiana HOM05D004239 ORTHO05D005191 3.4e-06 55.5 79 48.1
Dinv40275 Davidia involucrata HOM05D004239 ORTHO05D005191 3.4e-06 55.5 79 48.1
FAN05G0638 Fragaria x ananassa HOM05D004239 ORTHO05D005191 3.4e-06 55.5 79 49.4
FAN05G5256 Fragaria x ananassa HOM05D004239 ORTHO05D005191 3.4e-06 55.5 79 49.4
FAN09G3705 Fragaria x ananassa HOM05D004239 ORTHO05D005191 3.4e-06 55.5 79 49.4
QL03p006503 Quercus lobata HOM05D004239 ORTHO05D005191 3.4e-06 55.5 79 46.8
CiPaw.07G016500 Carya illinoinensis HOM05D004239 ORTHO05D005191 5.8e-06 54.7 80 48.8
FvH4_6g05650 Fragaria vesca HOM05D004239 ORTHO05D005191 5.8e-06 54.7 79 48.1
FAN02G3565 Fragaria x ananassa HOM05D004239 ORTHO05D005191 5.8e-06 54.7 79 48.1
FAN14G1612 Fragaria x ananassa HOM05D004239 ORTHO05D005191 5.8e-06 54.7 79 48.1
FAN14G2823 Fragaria x ananassa HOM05D004239 ORTHO05D005191 5.8e-06 54.7 79 48.1
Glyma.03G239000 Glycine max HOM05D004239 ORTHO05D005191 5.8e-06 54.7 78 48.7
Nitab4.5_0009323g0010 Nicotiana tabacum HOM05D004239 ORTHO05D005191 5.8e-06 54.7 78 46.2
TAR365G0701 Trochodendron aralioides HOM05D004239 ORTHO05D005191 5.8e-06 54.7 78 44.9
CSS0041428 Camellia sinensis var. sinensis HOM05D004239 ORTHO05D005191 7.6e-06 54.3 32 78.1
Lj1g0017751 Lotus japonicus HOM05D004239 ORTHO05D005191 7.6e-06 54.3 79 48.1
Lalb_Chr04g0260811 Lupinus albus HOM05D004239 ORTHO05D005191 7.6e-06 54.3 78 47.4
ECA234G2741 Erigeron canadensis HOM05D004239 ORTHO05D005191 1.0e-05 53.9 88 44.3
Oeu038249.1 Olea europaea HOM05D004239 ORTHO05D005191 1.0e-05 53.9 79 46.8
Peaxi162Scf00037g00226 Petunia axillaris HOM05D004239 ORTHO05D005191 1.0e-05 53.9 78 43.6
Phvul.006G092900 Phaseolus vulgaris HOM05D004239 ORTHO05D005191 1.0e-05 53.9 78 48.7


User provided reference genes

Program Settings