Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33140 Trifolium pratense HOM05D001014 ORTHO05D410761 6.2e-252 874.0 563 100.0
Psat4g225560 Pisum sativum HOM05D001014 ORTHO05D000896 2.5e-19 101.3 134 49.3
Ca_23130_v3 Cicer arietinum L. HOM05D001014 ORTHO05D000896 7.6e-16 89.7 205 39.5
Medtr8g005205 Medicago truncatula HOM05D001014 ORTHO05D257659 1.1e-09 69.3 528 25.2
Atru.chr5.168 Acer truncatum HOM05D001014 ORTHO05D037881 8.9e-09 66.2 126 37.3
FvH4_7g09720 Fragaria vesca HOM05D001014 ORTHO05D000896 1.2e-08 65.9 129 34.9
arahy.Tifrunner.gnm1.ann1.HJ27AX Arachis hypogaea HOM05D001014 ORTHO05D038819 2.6e-08 64.7 139 38.1
Dinv44078 Davidia involucrata HOM05D001014 ORTHO05D000896 2.6e-08 64.7 125 35.2
Atru.chr5.167 Acer truncatum HOM05D001014 ORTHO05D037881 4.4e-08 63.9 126 36.5
arahy.Tifrunner.gnm1.ann1.AGG1KT Arachis hypogaea HOM05D001014 ORTHO05D038819 5.8e-08 63.5 125 38.4
Thecc.01G392000 Theobroma cacao HOM05D001014 ORTHO05D000896 7.6e-08 63.2 168 33.9
Manes.01G271700 Manihot esculenta HOM05D001014 ORTHO05D000896 1.7e-07 62.0 116 38.8
Manes.05G052800 Manihot esculenta HOM05D001014 ORTHO05D000896 4.9e-07 60.5 123 39.8
BcaC07g40560 Brassica carinata HOM05D001014 ORTHO05D000896 8.4e-07 59.7 105 38.1
BcaC09g50470 Brassica carinata HOM05D001014 ORTHO05D000896 8.4e-07 59.7 126 35.7
BolC8t51132H Brassica oleracea HOM05D001504 ORTHO05D001394 8.4e-07 59.7 105 38.1
Cpa.g.sc101.33 Carica papaya HOM05D001014 ORTHO05D000896 8.4e-07 59.7 118 39.8
Dinv43638 Davidia involucrata HOM05D001014 ORTHO05D000896 8.4e-07 59.7 137 33.6
MSTRG.17141 Avicennia marina HOM05D001014 ORTHO05D000896 1.1e-06 59.3 211 30.8
A09p52690 Brassica napus HOM05D001504 ORTHO05D001394 1.1e-06 59.3 132 35.6
DCAR_025074 Daucus carota HOM05D001014 ORTHO05D000896 1.1e-06 59.3 119 35.3
Oeu063223.1 Olea europaea HOM05D001014 ORTHO05D000896 1.1e-06 59.3 167 32.9
SGA_v2.0_scaffold43G16529 Striga asiatica HOM05D001014 ORTHO05D000896 1.1e-06 59.3 122 34.4
CAN.G402.6 Capsicum annuum HOM05D001014 ORTHO05D000896 1.4e-06 58.9 158 32.9
FAN10G2363 Fragaria x ananassa HOM05D001014 ORTHO05D000896 1.4e-06 58.9 129 32.6
RcHm_v2.0_Chr1g0346661 Rosa chinensis HOM05D001014 ORTHO05D000896 1.4e-06 58.9 101 36.6
COL.COLO4_12433 Corchorus olitorius HOM05D001014 ORTHO05D000896 1.9e-06 58.5 170 31.8
Duzib138G0015 Durio zibethinus HOM05D001014 ORTHO05D000896 1.9e-06 58.5 167 30.5
FAN10G1403 Fragaria x ananassa HOM05D001014 ORTHO05D000896 1.9e-06 58.5 129 32.6
Prupe.2G125500 Prunus persica HOM05D001014 ORTHO05D000896 1.9e-06 58.5 106 37.7
CSS0029672 Camellia sinensis var. sinensis HOM05D001014 ORTHO05D000896 2.4e-06 58.2 126 34.9
CSS0039665 Camellia sinensis var. sinensis HOM05D001014 ORTHO05D000896 2.4e-06 58.2 126 34.9
Gohir.A11G076700 Gossypium hirsutum HOM05D001014 ORTHO05D000896 2.4e-06 58.2 275 25.5
Lj9P559T19 Lonicera japonica HOM05D001014 ORTHO05D000896 2.4e-06 58.2 131 35.1
Actinidia40392 Actinidia chinensis HOM05D001014 ORTHO05D000896 3.2e-06 57.8 130 32.3
Aa31LG10G14510 Aethionema arabicum HOM05D001014 ORTHO05D000896 3.2e-06 57.8 142 38.0
QL04p031181 Quercus lobata HOM05D001014 ORTHO05D000896 3.2e-06 57.8 99 39.4
VMungo0251G3271 Vigna mungo HOM05D001014 ORTHO05D000896 3.2e-06 57.8 52 51.9
C08p35390 Brassica napus HOM05D001504 ORTHO05D001394 4.2e-06 57.4 132 34.8
BraA09t40698Z Brassica rapa HOM05D001014 ORTHO05D000896 4.2e-06 57.4 132 34.8
Duzib133G1174 Durio zibethinus HOM05D001014 ORTHO05D000896 4.2e-06 57.4 122 37.7
A01p19910 Brassica napus HOM05D001014 ORTHO05D000896 5.4e-06 57.0 102 35.3
BraA01t01917Z Brassica rapa HOM05D001014 ORTHO05D000896 5.4e-06 57.0 102 35.3
Glyma.20G117400 Glycine max HOM05D001014 ORTHO05D000896 5.4e-06 57.0 101 35.6
PSO063G3393 Papaver somniferum HOM05D001014 ORTHO05D000896 5.4e-06 57.0 39 64.1
PSO782G1093 Papaver somniferum HOM05D001014 ORTHO05D000896 5.4e-06 57.0 39 64.1
SGA_v2.0_scaffold116G32304 Striga asiatica HOM05D001014 ORTHO05D000896 5.4e-06 57.0 125 40.0
BcaC07g42782 Brassica carinata HOM05D001014 ORTHO05D000896 7.1e-06 56.6 104 40.4
BcaC07g42783 Brassica carinata HOM05D001014 ORTHO05D000896 7.1e-06 56.6 104 40.4
Cc00_g20450 Coffea canephora HOM05D001014 ORTHO05D000896 7.1e-06 56.6 121 36.4
Gohir.A08G059400 Gossypium hirsutum HOM05D001014 ORTHO05D000896 7.1e-06 56.6 176 31.2
Gohir.D08G068600 Gossypium hirsutum HOM05D001014 ORTHO05D000896 7.1e-06 56.6 176 31.2
CiPaw.14G022000 Carya illinoinensis HOM05D001014 ORTHO05D000896 9.3e-06 56.2 109 40.4
Migut.N01754 Erythranthe guttata HOM05D001014 ORTHO05D000896 9.3e-06 56.2 133 33.1
Lj4g0011640 Lotus japonicus HOM05D001014 ORTHO05D000896 9.3e-06 56.2 123 35.0
Prupe.5G064500 Prunus persica HOM05D001014 ORTHO05D000896 9.3e-06 56.2 135 31.9


User provided reference genes

Program Settings