Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33135 Trifolium pratense HOM05D000789 ORTHO05D009723 1.4e-36 156.0 89 100.0
Medtr2g081600 Medicago truncatula HOM05D000789 ORTHO05D009723 2.4e-25 118.6 117 60.7
Psat5g248080 Pisum sativum HOM05D000789 ORTHO05D009723 1.6e-24 115.9 125 59.2
Glyma.12G217200 Glycine max HOM05D000789 ORTHO05D009723 2.9e-23 111.7 120 58.3
Medtr2g081630 Medicago truncatula HOM05D000789 ORTHO05D009723 1.9e-22 109.0 119 58.0
VMungo0331G1749 Vigna mungo HOM05D000789 ORTHO05D009723 2.5e-22 108.6 121 53.7
Glyma.13G284000 Glycine max HOM05D000789 ORTHO05D009723 3.2e-22 108.2 120 56.7
Lj3g0024651 Lotus japonicus HOM05D000789 ORTHO05D009723 3.2e-22 108.2 124 53.2
Phvul.010G102300 Phaseolus vulgaris HOM05D000789 ORTHO05D009723 7.2e-22 107.1 121 52.9
Ca_01788_v3 Cicer arietinum L. HOM05D000789 ORTHO05D009723 4.7e-21 104.4 117 53.8
Ca_20952_v3 Cicer arietinum L. HOM05D000789 ORTHO05D009723 4.7e-21 104.4 105 58.1
Phvul.010G082500 Phaseolus vulgaris HOM05D000789 ORTHO05D009723 4.7e-21 104.4 120 52.5
Thecc.03G275700 Theobroma cacao HOM05D000789 ORTHO05D009723 2.6e-19 98.6 117 50.4
Potri.003G124500 Populus trichocarpa HOM05D000789 ORTHO05D009723 1.7e-18 95.9 115 47.8
MD06G1078500 Malus domestica HOM05D000789 ORTHO05D009723 3.7e-18 94.7 118 45.8
Duzib068G0751 Durio zibethinus HOM05D000789 ORTHO05D009723 4.8e-18 94.4 103 51.5
Aqoxy7G00361 Aquilegia oxysepala HOM05D000789 ORTHO05D009723 6.3e-18 94.0 115 47.8
GSVIVG01019784001 Vitis vinifera HOM05D000789 ORTHO05D009723 8.3e-18 93.6 115 47.0
COL.COLO4_34430 Corchorus olitorius HOM05D000789 ORTHO05D009723 1.4e-17 92.8 111 51.4
Cc08_g14410 Coffea canephora HOM05D000789 ORTHO05D009723 1.8e-17 92.4 108 49.1
Potri.001G106900 Populus trichocarpa HOM05D000789 ORTHO05D009723 1.8e-17 92.4 116 48.3
Dinv37662 Davidia involucrata HOM05D000789 ORTHO05D009723 2.4e-17 92.0 103 51.5
TAR367G0004 Trochodendron aralioides HOM05D000789 ORTHO05D009723 2.4e-17 92.0 116 46.6
TAR375G1131 Trochodendron aralioides HOM05D000789 ORTHO05D009723 2.4e-17 92.0 116 46.6
TAR636G1221 Trochodendron aralioides HOM05D000789 ORTHO05D009723 2.4e-17 92.0 80 61.2
Gohir.D08G199100 Gossypium hirsutum HOM05D000789 ORTHO05D009723 9.1e-17 90.1 109 47.7
Gorai.004G209900 Gossypium raimondii HOM05D000789 ORTHO05D009723 9.1e-17 90.1 109 47.7
Duzib205G0203 Durio zibethinus HOM05D000789 ORTHO05D009723 1.6e-16 89.4 115 46.1
PGR031G2183 Punica granatum HOM05D000789 ORTHO05D009723 1.6e-16 89.4 107 45.8
Actinidia02020 Actinidia chinensis HOM05D000789 ORTHO05D009723 2.0e-16 89.0 108 48.1
RcHm_v2.0_Chr7g0198391 Rosa chinensis HOM05D000789 ORTHO05D009723 2.0e-16 89.0 117 44.4
CSS0037109 Camellia sinensis var. sinensis HOM05D000789 ORTHO05D009723 2.7e-16 88.6 109 51.4
Nitab4.5_0004032g0040 Nicotiana tabacum HOM05D000789 ORTHO05D009723 2.7e-16 88.6 108 50.0
FAN18G1981 Fragaria x ananassa HOM05D000789 ORTHO05D009723 7.7e-16 87.0 119 45.4
MBI17_g08179_MAGBIO Magnolia biondii HOM05D000789 ORTHO05D009723 7.7e-16 87.0 103 49.5
Manes.01G063900 Manihot esculenta HOM05D000789 ORTHO05D009723 1.0e-15 86.7 115 48.7
Prupe.5G096000 Prunus persica HOM05D000789 ORTHO05D009723 1.0e-15 86.7 118 44.1
FAN08G0135 Fragaria x ananassa HOM05D000789 ORTHO05D001143 1.3e-15 86.3 117 46.2
Lsat_1_v5_gn_6_87100 Lactuca sativa HOM05D000789 ORTHO05D009723 1.7e-15 85.9 109 50.5
TPR.G27659 Trifolium pratense HOM05D000789 ORTHO05D009723 2.9e-15 85.1 86 58.1
Migut.A00788 Erythranthe guttata HOM05D000789 ORTHO05D009723 3.8e-15 84.7 111 45.0
FvH4_5g01980 Fragaria vesca HOM05D000789 ORTHO05D009723 5.0e-15 84.3 119 44.5
Oeu011060.1 Olea europaea HOM05D000789 ORTHO05D009723 5.0e-15 84.3 109 45.0
Actinidia05216 Actinidia chinensis HOM05D000789 ORTHO05D009723 1.1e-14 83.2 103 47.6
ECA240G1147 Erigeron canadensis HOM05D000789 ORTHO05D009723 1.1e-14 83.2 118 46.6
TWI81G0749 Tripterygium wilfordii HOM05D000789 ORTHO05D009723 1.1e-14 83.2 105 48.6
CiPaw.12G095100 Carya illinoinensis HOM05D000789 ORTHO05D009723 3.3e-14 81.6 117 44.4
Eucgr.D01871 Eucalyptus grandis HOM05D000789 ORTHO05D009723 3.3e-14 81.6 108 46.3
HanXRQChr03g0086551 Helianthus annuus HOM05D000789 ORTHO05D009723 5.5e-14 80.9 104 48.1
Atru.chr9.2206 Acer truncatum HOM05D000789 ORTHO05D009723 7.2e-14 80.5 116 41.4
Haze_08884 Corylus avellana HOM05D000789 ORTHO05D009723 7.2e-14 80.5 119 41.2
Haze_08885 Corylus avellana HOM05D000789 ORTHO05D009723 7.2e-14 80.5 119 41.2
Cfa012147 Carpinus fangiana HOM05D000789 ORTHO05D009723 9.5e-14 80.1 119 41.2
PSO478G1723 Papaver somniferum HOM05D000789 ORTHO05D009723 9.5e-14 80.1 100 47.0
Peaxi162Scf00102g01519 Petunia axillaris HOM05D000789 ORTHO05D009723 2.1e-13 79.0 96 51.0
Ciclev10023545m.g Citrus clementina HOM05D000789 ORTHO05D009723 3.6e-13 78.2 103 49.5
QL08p020939 Quercus lobata HOM05D000789 ORTHO05D009723 6.1e-13 77.4 116 42.2
CSS0035461 Camellia sinensis var. sinensis HOM05D000789 ORTHO05D009723 1.0e-12 76.6 119 41.2
CSS0038031 Camellia sinensis var. sinensis HOM05D000789 ORTHO05D009723 1.8e-12 75.9 111 43.2
Cfa012144 Carpinus fangiana HOM05D000789 ORTHO05D009723 3.0e-12 75.1 117 41.0
HPP92_022560 Vanilla planifolia HOM05D000789 ORTHO05D009723 3.0e-12 75.1 103 45.6
Zm00001eb365480 Zea mays HOM05D000789 ORTHO05D009723 3.0e-12 75.1 113 38.9
Zm00001eb365500 Zea mays HOM05D000789 ORTHO05D009723 3.0e-12 75.1 113 38.9
Zm00001eb434020 Zea mays HOM05D000789 ORTHO05D009723 3.0e-12 75.1 113 38.9
Haze_08888 Corylus avellana HOM05D000789 ORTHO05D009723 4.0e-12 74.7 117 40.2
HanXRQChr13g0416521 Helianthus annuus HOM05D000789 ORTHO05D009723 5.2e-12 74.3 100 46.0
Haze_08891 Corylus avellana HOM05D000789 ORTHO05D009723 6.8e-12 73.9 117 40.2
Oeu049552.1 Olea europaea HOM05D000789 ORTHO05D009723 6.8e-12 73.9 103 45.6
Rhsim02G0225800 Rhododendron simsii HOM05D000789 ORTHO05D009723 1.2e-11 73.2 122 41.0
CsaV3_4G006020 Cucumis sativus L. HOM05D000789 ORTHO05D009723 2.6e-11 72.0 110 42.7
ClCG07G008020 Citrullus lanatus HOM05D000789 ORTHO05D009723 3.4e-11 71.6 117 39.3
DCAR_000599 Daucus carota HOM05D000789 ORTHO05D009723 4.4e-11 71.2 108 42.6
CAN.G792.87 Capsicum annuum HOM05D000789 ORTHO05D009723 9.8e-11 70.1 111 42.3
MELO3C016347.2 Cucumis melo HOM05D000789 ORTHO05D009723 1.3e-10 69.7 117 40.2
Os04g0683400 Oryza sativa ssp. japonica HOM05D000789 ORTHO05D009723 1.7e-10 69.3 123 36.6
Sed0008867 Sechium edule HOM05D000789 ORTHO05D009723 2.2e-10 68.9 110 40.0
Cpa.g.sc2.419 Carica papaya HOM05D000789 ORTHO05D009723 3.1e-09 65.1 103 43.7
HPP92_025725 Vanilla planifolia HOM05D000789 ORTHO05D009723 7.0e-09 63.9 104 39.4
CANSAT21G1914 Cannabis sativa HOM05D000789 ORTHO05D009723 7.8e-08 60.5 113 36.3
Eucgr.E00570 Eucalyptus grandis HOM05D000789 ORTHO05D009723 1.3e-07 59.7 110 36.4
Oeu018542.1 Olea europaea HOM05D000789 ORTHO05D000897 1.9e-06 55.8 59 50.8
Oeu018544.1 Olea europaea HOM05D000789 ORTHO05D000897 1.9e-06 55.8 59 50.8
Gohir.A08G180300 Gossypium hirsutum HOM05D000789 ORTHO05D009723 2.5e-06 55.5 41 63.4
VMungo0331G1093 Vigna mungo HOM05D000789 ORTHO05D009723 2.5e-06 55.5 32 81.2
GSVIVG01008570001 Vitis vinifera HOM05D000789 ORTHO05D000897 2.5e-06 55.5 58 51.7
GSVIVG01036760001 Vitis vinifera HOM05D000789 ORTHO05D000897 2.5e-06 55.5 58 48.3
ATR0680G242 Amborella trichopoda HOM05D000789 ORTHO05D009723 3.3e-06 55.1 95 37.9


User provided reference genes

Program Settings