Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33101 Trifolium pratense HOM05D004302 ORTHO05D004939 4.6e-30 134.0 74 100.0
TPR.G3302 Trifolium pratense HOM05D004302 ORTHO05D004939 5.6e-28 127.1 74 98.6
Medtr7g017400 Medicago truncatula HOM05D004302 ORTHO05D004939 4.0e-26 120.9 74 91.9
Psat3g208160 Pisum sativum HOM05D004302 ORTHO05D004939 1.7e-21 105.5 75 84.0
Lj1g0002235 Lotus japonicus HOM05D004302 ORTHO05D004939 4.3e-20 100.9 74 78.4
Ca_06955_v3 Cicer arietinum L. HOM05D004302 ORTHO05D004939 4.8e-19 97.4 74 79.7
Glyma.08G253600 Glycine max HOM05D004302 ORTHO05D004939 1.5e-17 92.4 74 73.0
Glyma.18G275900 Glycine max HOM05D004302 ORTHO05D004939 1.9e-15 85.5 74 67.6
VMungo1383G1338 Vigna mungo HOM05D004302 ORTHO05D004939 4.2e-15 84.3 74 68.9
Phvul.008G025000 Phaseolus vulgaris HOM05D004302 ORTHO05D004939 5.4e-15 84.0 74 67.6
Lalb_Chr04g0258341 Lupinus albus HOM05D004302 ORTHO05D004939 6.0e-14 80.5 74 68.9
Lalb_Chr10g0092641 Lupinus albus HOM05D004302 ORTHO05D004939 2.3e-13 78.6 74 67.6
RcHm_v2.0_Chr2g0164611 Rosa chinensis HOM05D004302 ORTHO05D004939 3.9e-13 77.8 74 56.8
FAN02G3051 Fragaria x ananassa HOM05D004302 ORTHO05D004939 1.3e-11 72.8 74 55.4
FvH4_6g46160 Fragaria vesca HOM05D004302 ORTHO05D004939 4.8e-11 70.9 74 54.1
FAN05G3039 Fragaria x ananassa HOM05D004302 ORTHO05D004939 4.8e-11 70.9 74 54.1
FAN14G3160 Fragaria x ananassa HOM05D004302 ORTHO05D004939 4.8e-11 70.9 74 54.1
MD09G1076600 Malus domestica HOM05D004302 ORTHO05D004939 4.8e-11 70.9 74 55.4
Prupe.3G247500 Prunus persica HOM05D004302 ORTHO05D004939 6.2e-11 70.5 74 62.2
Thecc.04G108800 Theobroma cacao HOM05D004302 ORTHO05D004939 1.5e-09 65.9 74 58.1
QL02p064995 Quercus lobata HOM05D004302 ORTHO05D004939 2.0e-09 65.5 76 60.5
MELO3C022055.2 Cucumis melo HOM05D004302 ORTHO05D004939 3.4e-09 64.7 74 50.0
Sed0013406 Sechium edule HOM05D004302 ORTHO05D004939 3.4e-09 64.7 75 58.7
CANSAT64G2833 Cannabis sativa HOM05D004302 ORTHO05D004939 4.5e-09 64.3 74 59.5
ClCG11G005010 Citrullus lanatus HOM05D004302 ORTHO05D004939 4.5e-09 64.3 74 50.0
Gohir.A11G160501 Gossypium hirsutum HOM05D004302 ORTHO05D004939 5.8e-09 63.9 74 59.5
Gohir.D08G061666 Gossypium hirsutum HOM05D004302 ORTHO05D004939 5.8e-09 63.9 70 64.3
Gohir.D11G166700 Gossypium hirsutum HOM05D004302 ORTHO05D004939 5.8e-09 63.9 74 60.8
Gorai.004G063700 Gossypium raimondii HOM05D004302 ORTHO05D004939 5.8e-09 63.9 70 64.3
Gorai.007G177800 Gossypium raimondii HOM05D004302 ORTHO05D004939 5.8e-09 63.9 74 60.8
COL.COLO4_10644 Corchorus olitorius HOM05D004302 ORTHO05D004939 7.6e-09 63.5 74 58.1
Duzib133G0367 Durio zibethinus HOM05D004302 ORTHO05D004939 7.6e-09 63.5 74 58.1
SalBow1G5644 Salvia bowleyana HOM05D004302 ORTHO05D004939 1.7e-08 62.4 71 59.2
CsaV3_5G038750 Cucumis sativus L. HOM05D004302 ORTHO05D004939 2.2e-08 62.0 74 48.6
Duzib138G0864 Durio zibethinus HOM05D004302 ORTHO05D004939 3.8e-08 61.2 74 56.8
FAN09G3470 Fragaria x ananassa HOM05D004302 ORTHO05D004939 3.8e-08 61.2 85 54.1
Potri.004G112400 Populus trichocarpa HOM05D004302 ORTHO05D004939 2.5e-07 58.5 70 60.0
Haze_14364 Corylus avellana HOM05D004302 ORTHO05D004939 4.2e-07 57.8 74 55.4
CSS0037679 Camellia sinensis var. sinensis HOM05D004302 ORTHO05D004939 7.1e-07 57.0 75 54.7
Cfa007709 Carpinus fangiana HOM05D004302 ORTHO05D004939 7.1e-07 57.0 70 58.6
Dinv34899 Davidia involucrata HOM05D004302 ORTHO05D004939 7.1e-07 57.0 71 50.7
Manes.01G104600 Manihot esculenta HOM05D004302 ORTHO05D004939 9.3e-07 56.6 74 56.8
Cc07_g04590 Coffea canephora HOM05D004302 ORTHO05D004939 1.2e-06 56.2 71 59.2
Sabra17G0088200 Salix brachista HOM05D004302 ORTHO05D004939 1.2e-06 56.2 70 48.6
CiPaw.03G081700 Carya illinoinensis HOM05D004302 ORTHO05D004939 1.6e-06 55.8 74 54.1
MSTRG.10561 Avicennia marina HOM05D004302 ORTHO05D004939 2.1e-06 55.5 71 54.9
Ciclev10011780m.g Citrus clementina HOM05D004302 ORTHO05D004939 7.9e-06 53.5 74 54.1


User provided reference genes

Program Settings