Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3308 Trifolium pratense HOM05D011629 ORTHO05D013267 1.8e-248 862.1 408 100.0
TPR.G3283 Trifolium pratense HOM05D011629 ORTHO05D013267 1.3e-150 537.0 371 73.0
Medtr3g011190 Medicago truncatula HOM05D011629 ORTHO05D013267 6.3e-129 464.9 387 59.4
Psat2g144440 Pisum sativum HOM05D011629 ORTHO05D013267 4.8e-113 412.1 370 54.3
Psat5g225320 Pisum sativum HOM05D011629 ORTHO05D013267 4.5e-111 405.6 368 52.7
Medtr4g009850 Medicago truncatula HOM05D011629 ORTHO05D013267 1.2e-103 380.9 338 56.5
Psat5g225280 Pisum sativum HOM05D011629 ORTHO05D013267 3.7e-89 332.8 262 59.9
Medtr3g011540 Medicago truncatula HOM05D011629 ORTHO05D013267 3.0e-83 313.2 241 62.7
Psat5g225160 Pisum sativum HOM05D011629 ORTHO05D013267 4.1e-72 276.2 264 53.8
COL.COLO4_14086 Corchorus olitorius HOM05D011629 ORTHO05D013267 1.9e-29 134.4 363 28.7
COL.COLO4_14085 Corchorus olitorius HOM05D000206 ORTHO05D002863 9.6e-29 132.1 288 31.2
QL09p019845 Quercus lobata HOM05D011629 ORTHO05D013267 4.8e-28 129.8 379 29.8
CANSAT01G1414 Cannabis sativa HOM05D011629 ORTHO05D013267 1.4e-19 101.7 247 30.8
CANSAT01G0762 Cannabis sativa HOM05D011629 ORTHO05D013267 1.8e-19 101.3 247 30.8
COL.COLO4_14087 Corchorus olitorius HOM05D011629 ORTHO05D013267 3.2e-16 90.5 91 42.9
COL.COLO4_31564 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.9e-13 81.3 145 32.4
COL.COLO4_31566 Corchorus olitorius HOM05D008040 ORTHO05D010075 7.4e-13 79.3 147 31.3
Oeu009728.1 Olea europaea HOM05D008040 ORTHO05D010075 9.7e-13 79.0 138 33.3
Oeu045297.1 Olea europaea HOM05D008040 ORTHO05D010075 9.7e-13 79.0 211 27.0
COL.COLO4_12486 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.3e-12 78.6 143 30.1
COL.COLO4_31567 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.3e-12 78.6 147 31.3
Nitab4.5_0005142g0030 Nicotiana tabacum HOM05D008040 ORTHO05D010075 2.2e-12 77.8 213 27.7
COL.COLO4_31563 Corchorus olitorius HOM05D008040 ORTHO05D010075 2.8e-12 77.4 151 30.5
Oeu009732.1 Olea europaea HOM05D001586 ORTHO05D001543 3.7e-12 77.0 136 33.8
COL.COLO4_10414 Corchorus olitorius HOM05D008040 ORTHO05D010075 4.8e-12 76.6 143 31.5
Rhsim11G0097300 Rhododendron simsii HOM05D061936 ORTHO05D010075 4.8e-12 76.6 212 29.7
Rhsim11G0097100 Rhododendron simsii HOM05D061936 ORTHO05D013267 6.3e-12 76.3 212 29.7
COL.COLO4_30844 Corchorus olitorius HOM05D008040 ORTHO05D010075 8.2e-12 75.9 242 26.9
CSS0049849 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.8e-11 74.7 387 26.4
TWI12G0677 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 5.3e-11 73.2 157 33.8
TWI77G0815 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 1.5e-10 71.6 135 32.6
Ciclev10006596m.g Citrus clementina HOM05D008040 ORTHO05D010075 2.6e-10 70.9 143 33.6
CSS0013591 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 5.9e-10 69.7 399 24.8
CSS0016313 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.3e-09 68.6 241 29.0
CSS0010874 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.7e-09 68.2 399 24.3
COL.COLO4_14088 Corchorus olitorius HOM05D011629 ORTHO05D013267 1.7e-09 68.2 108 37.0
Sabra08G0010200 Salix brachista HOM05D008040 ORTHO05D010075 3.8e-09 67.0 131 32.1
Ciclev10026974m.g Citrus clementina HOM05D008040 ORTHO05D010075 5.0e-09 66.6 137 32.1
COL.COLO4_10419 Corchorus olitorius HOM05D026534 ORTHO05D010075 5.0e-09 66.6 283 23.3
Zm00001eb116670 Zea mays HOM05D009359 ORTHO05D000491 5.0e-09 66.6 299 24.1
TWI12G0410 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 2.5e-08 64.3 176 27.8
Zm00001eb116720 Zea mays HOM05D009359 ORTHO05D000491 2.5e-08 64.3 299 24.1
Zm00001eb115740 Zea mays HOM05D009359 ORTHO05D000491 3.2e-08 63.9 299 24.1
vmacro17323 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 4.2e-08 63.5 136 31.6
AUR62008579 Chenopodium quinoa HOM05D008040 ORTHO05D010075 3.6e-07 60.5 129 29.5
Thecc.03G152300 Theobroma cacao HOM05D011629 ORTHO05D013267 6.1e-07 59.7 180 27.8
Nitab4.5_0001552g0010 Nicotiana tabacum HOM05D008040 ORTHO05D010075 1.0e-06 58.9 148 29.1
vmacro17324 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 2.3e-06 57.8 141 30.5
Aqoxy6G00905 Aquilegia oxysepala HOM05D008040 ORTHO05D010075 8.8e-06 55.8 158 25.9


User provided reference genes

Program Settings