Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 8.3e-117 423.7 213 100.0
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 1.0e-90 337.0 217 80.6
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 1.6e-83 313.2 217 77.4
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 1.4e-47 193.7 222 57.7
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 2.0e-46 189.9 228 54.8
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 3.5e-46 189.1 218 55.5
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 1.5e-44 183.7 218 55.0
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 4.5e-38 162.2 195 55.4
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 4.5e-38 162.2 206 51.0
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 2.9e-37 159.5 192 55.2
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 3.8e-37 159.1 229 49.3
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 8.5e-37 157.9 217 47.9
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 1.1e-36 157.5 191 52.9
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 1.6e-35 153.7 205 50.2
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 1.0e-34 151.0 228 47.8
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 1.8e-34 150.2 215 47.4
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 6.8e-34 148.3 214 46.7
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 1.2e-33 147.5 196 46.9
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 1.2e-33 147.5 196 46.9
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 2.6e-33 146.4 210 47.1
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 2.2e-32 143.3 216 44.9
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.8e-32 142.9 224 46.9
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 2.8e-32 142.9 194 49.5
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 4.9e-32 142.1 214 46.7
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 4.9e-32 142.1 216 45.8
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 4.9e-32 142.1 222 46.8
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 6.3e-32 141.7 218 46.3
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 1.4e-31 140.6 224 45.5
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 1.8e-31 140.2 212 47.2
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 3.5e-30 136.0 218 44.0
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 3.5e-30 136.0 209 48.3
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 5.9e-30 135.2 223 41.7
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 2.3e-29 133.3 200 47.0
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 6.6e-29 131.7 219 44.3
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 8.6e-29 131.3 207 44.9
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 1.1e-28 131.0 261 40.6
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.1e-28 131.0 215 44.7
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 1.2e-27 127.5 185 42.7
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.2e-27 127.5 186 45.7
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 1.6e-27 127.1 218 41.3
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 6.1e-27 125.2 211 40.8
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 8.0e-27 124.8 188 43.6
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 2.3e-26 123.2 188 43.6
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.3e-26 123.2 188 43.6
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 2.3e-26 123.2 188 48.4
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 3.0e-26 122.9 188 43.6
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 4.0e-26 122.5 222 39.2
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 5.2e-26 122.1 183 43.7
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 6.8e-26 121.7 193 42.5
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 1.5e-25 120.6 193 39.9
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.0e-25 120.2 207 44.0
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 5.7e-25 118.6 195 42.1
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 7.5e-25 118.2 221 39.4
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 1.7e-24 117.1 199 41.2
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 1.7e-24 117.1 221 38.9
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 1.7e-24 117.1 227 41.0
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 2.2e-24 116.7 212 36.3
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 2.9e-24 116.3 206 41.7
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 3.7e-24 115.9 194 40.7
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 6.4e-24 115.2 185 42.7
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 6.4e-24 115.2 218 41.3
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.4e-23 113.2 219 41.1
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 5.4e-23 112.1 219 41.1
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 7.0e-23 111.7 217 40.1
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 9.2e-23 111.3 228 35.5
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 2.7e-22 109.8 237 34.6
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 3.5e-22 109.4 202 39.1
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 4.6e-22 109.0 201 40.8
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 4.6e-22 109.0 201 40.8
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 3.0e-21 106.3 172 42.4
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 1.1e-20 104.4 206 38.8
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 2.5e-20 103.2 182 36.8
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 5.6e-20 102.1 227 38.8
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 9.5e-20 101.3 184 41.8
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 9.5e-20 101.3 181 37.6
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 2.1e-19 100.1 194 37.6
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 3.6e-19 99.4 218 36.7
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 6.2e-19 98.6 205 35.1
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 6.2e-19 98.6 146 43.8
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 1.0e-18 97.8 200 38.0
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 1.4e-18 97.4 214 37.4
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 3.1e-18 96.3 252 34.9
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 8.9e-18 94.7 186 34.9
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 8.9e-18 94.7 186 34.9
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 3.4e-17 92.8 198 33.3
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 4.4e-17 92.4 239 35.6
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 7.5e-17 91.7 102 50.0
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.7e-16 90.5 188 35.6
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 2.2e-16 90.1 205 34.6
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.4e-15 87.4 201 32.8
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 2.4e-15 86.7 188 35.1
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 3.5e-14 82.8 244 31.6
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 7.8e-14 81.6 201 32.8
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 3.6e-11 72.8 197 32.5
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 1.1e-10 71.2 174 31.6
Lsat_1_v5_gn_1_25160 Lactuca sativa HOM05D007182 ORTHO05D008919 4.0e-10 69.3 203 31.5
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 5.2e-10 68.9 198 29.8
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 6.8e-10 68.6 197 32.0
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 5.8e-09 65.5 183 31.1
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 1.7e-08 63.9 137 36.5
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 2.9e-08 63.2 199 29.1
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 4.9e-08 62.4 161 31.7
HanXRQChr02g0037031 Helianthus annuus HOM05D007182 ORTHO05D008919 4.1e-07 59.3 186 29.0
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 5.4e-07 58.9 189 32.3
MBI06_g01043_MAGBIO Magnolia biondii HOM05D007182 ORTHO05D008919 9.2e-07 58.2 193 32.1


User provided reference genes

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