Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32941 Trifolium pratense HOM05D000254 ORTHO05D000165 7.6e-45 183.3 85 100.0
TPR.G208 Trifolium pratense HOM05D000254 ORTHO05D000165 5.3e-22 107.5 72 63.9
Glyma.11G176303 Glycine max HOM05D000254 ORTHO05D000165 2.7e-18 95.1 70 60.0
Glyma.10G055700 Glycine max HOM05D000254 ORTHO05D000165 3.5e-18 94.7 58 67.2
Glyma.U031215 Glycine max HOM05D000254 ORTHO05D000165 4.6e-18 94.4 74 56.8
arahy.Tifrunner.gnm1.ann1.HH8KKF Arachis hypogaea HOM05D000254 ORTHO05D000165 1.0e-17 93.2 69 56.5
arahy.Tifrunner.gnm1.ann1.Q3MTCJ Arachis hypogaea HOM05D000254 ORTHO05D000165 1.0e-17 93.2 69 56.5
arahy.Tifrunner.gnm1.ann1.T4IM50 Arachis hypogaea HOM05D000254 ORTHO05D000165 1.0e-17 93.2 69 56.5
arahy.Tifrunner.gnm1.ann1.ZHV4UG Arachis hypogaea HOM05D000254 ORTHO05D000165 1.3e-17 92.8 73 54.8
TPR.G40112 Trifolium pratense HOM05D000254 ORTHO05D000165 1.8e-17 92.4 58 63.8
Glyma.01G054700 Glycine max HOM05D000254 ORTHO05D000165 2.3e-17 92.0 74 54.1
CSS0009137 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 5.1e-17 90.9 58 63.8
arahy.Tifrunner.gnm1.ann1.REY47L Arachis hypogaea HOM05D000254 ORTHO05D000165 1.1e-16 89.7 60 58.3
arahy.Tifrunner.gnm1.ann1.TUZY7Z Arachis hypogaea HOM05D000254 ORTHO05D000165 1.1e-16 89.7 94 43.6
Glyma.16G122000 Glycine max HOM05D000254 ORTHO05D000165 1.5e-16 89.4 58 63.8
arahy.Tifrunner.gnm1.ann1.H07TP5 Arachis hypogaea HOM05D000254 ORTHO05D000165 2.5e-16 88.6 60 58.3
CSS0045922 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.5e-16 88.6 58 62.1
CSS0007203 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 3.3e-16 88.2 54 66.7
Lj1g0011213 Lotus japonicus HOM05D000254 ORTHO05D000165 3.3e-16 88.2 58 58.6
arahy.Tifrunner.gnm1.ann1.9Z3MNM Arachis hypogaea HOM05D000254 ORTHO05D000165 5.7e-16 87.4 60 58.3
Glyma.19G047200 Glycine max HOM05D000254 ORTHO05D000165 5.7e-16 87.4 55 67.3
arahy.Tifrunner.gnm1.ann1.4IK5SR Arachis hypogaea HOM05D000254 ORTHO05D000165 9.7e-16 86.7 60 56.7
Lj1g0025794 Lotus japonicus HOM05D000254 ORTHO05D000165 8.2e-15 83.6 58 55.2
Lj3g0020482 Lotus japonicus HOM05D000254 ORTHO05D000165 8.2e-15 83.6 58 55.2
Lj5g0016684 Lotus japonicus HOM05D000254 ORTHO05D000165 8.2e-15 83.6 58 55.2
arahy.Tifrunner.gnm1.ann1.XB47SY Arachis hypogaea HOM05D000254 ORTHO05D000165 1.1e-14 83.2 73 50.7
PGR142G1242 Punica granatum HOM05D000254 ORTHO05D000165 1.4e-14 82.8 70 54.3
HanXRQChr09g0270721 Helianthus annuus HOM05D000254 ORTHO05D000165 2.4e-14 82.0 70 54.3
CSS0034358 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 4.1e-14 81.3 66 54.5
THA.LOC104827337 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 5.3e-14 80.9 58 56.9
THA.LOC104827361 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 5.3e-14 80.9 58 56.9
Thhalv10022584m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 6.9e-14 80.5 58 53.4
TWI38G0087 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 6.9e-14 80.5 67 56.7
Oeu001568.1 Olea europaea HOM05D000254 ORTHO05D000165 9.0e-14 80.1 58 56.9
TPR.G22178 Trifolium pratense HOM05D000254 ORTHO05D000165 9.0e-14 80.1 58 56.9
TPR.G8984 Trifolium pratense HOM05D000254 ORTHO05D000165 9.0e-14 80.1 58 56.9
arahy.Tifrunner.gnm1.ann1.B9TG8T Arachis hypogaea HOM05D000254 ORTHO05D000165 1.2e-13 79.7 58 56.9
Thhalv10024135m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.5e-13 79.3 58 51.7
CARHR292680 Cardamine hirsuta HOM05D000254 ORTHO05D000165 2.0e-13 79.0 62 54.8
Medtr6g022200 Medicago truncatula HOM05D000254 ORTHO05D010315 2.6e-13 78.6 61 55.7
CARHR261160 Cardamine hirsuta HOM05D000254 ORTHO05D000165 3.4e-13 78.2 56 55.4
Oeu001455.1 Olea europaea HOM05D000254 ORTHO05D000165 3.4e-13 78.2 58 55.2
Oeu018287.1 Olea europaea HOM05D000254 ORTHO05D000165 3.4e-13 78.2 58 55.2
Hund26328 Selenicereus undatus HOM05D000254 ORTHO05D000165 4.5e-13 77.8 58 55.2
CSS0027448 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.0e-12 76.6 84 45.2
TPR.G22520 Trifolium pratense HOM05D000254 ORTHO05D000165 1.0e-12 76.6 72 50.0
CSS0044872 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.3e-12 76.3 70 48.6
Oeu055846.1 Olea europaea HOM05D000254 ORTHO05D000165 1.3e-12 76.3 58 55.2
HanXRQChr09g0243451 Helianthus annuus HOM05D000254 ORTHO05D000165 1.7e-12 75.9 70 48.6
Thhalv10002275m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 2.2e-12 75.5 68 48.5
Hund22241 Selenicereus undatus HOM05D000254 ORTHO05D000165 2.2e-12 75.5 56 55.4
arahy.Tifrunner.gnm1.ann1.A30LRN Arachis hypogaea HOM05D000254 ORTHO05D000165 2.9e-12 75.1 73 46.6
CSS0006270 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.9e-12 75.1 83 42.2
MELO3C032731.2 Cucumis melo HOM05D000254 ORTHO05D000165 2.9e-12 75.1 59 54.2
AT1G19260 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 3.8e-12 74.7 58 51.7
BolC4t24868H Brassica oleracea HOM05D000254 ORTHO05D000165 5.0e-12 74.3 72 44.4
Thhalv10002181m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 6.5e-12 73.9 65 46.2
Aqoxy4G01821 Aquilegia oxysepala HOM05D000254 ORTHO05D000165 8.5e-12 73.6 58 50.0
ECA238G3762 Erigeron canadensis HOM05D000254 ORTHO05D000165 2.5e-11 72.0 67 49.3
Oeu003644.1 Olea europaea HOM05D000254 ORTHO05D000165 3.2e-11 71.6 56 53.6
arahy.Tifrunner.gnm1.ann1.E4BE46 Arachis hypogaea HOM05D000254 ORTHO05D019825 4.2e-11 71.2 62 51.6
Thhalv10012204m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 4.2e-11 71.2 58 48.3
Ciclev10013598m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.5e-11 70.9 69 43.5
AT4G09660 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 7.2e-11 70.5 58 50.0
arahy.Tifrunner.gnm1.ann1.WE7X6Y Arachis hypogaea HOM05D000254 ORTHO05D000165 7.2e-11 70.5 48 60.4
Ciclev10017601m.g Citrus clementina HOM05D000254 ORTHO05D000165 9.4e-11 70.1 69 43.5
RcHm_v2.0_Chr5g0062621 Rosa chinensis HOM05D000254 ORTHO05D000165 9.4e-11 70.1 74 43.2
RcHm_v2.0_Chr1g0380371 Rosa chinensis HOM05D000254 ORTHO05D000165 1.2e-10 69.7 55 50.9
RcHm_v2.0_Chr3g0453661 Rosa chinensis HOM05D000254 ORTHO05D000165 1.2e-10 69.7 78 42.3
Sopen09g021430 Solanum pennellii HOM05D000254 ORTHO05D000165 1.2e-10 69.7 64 50.0
Thhalv10012191m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 2.1e-10 68.9 57 50.9
TWI73G1180 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 2.7e-10 68.6 71 43.7
Sopen09g021130 Solanum pennellii HOM05D000254 ORTHO05D000165 3.6e-10 68.2 64 50.0
Ciclev10000580m.g Citrus clementina HOM05D000254 ORTHO05D000165 4.6e-10 67.8 73 42.5
Medtr6g071290 Medicago truncatula HOM05D000254 ORTHO05D000165 4.6e-10 67.8 70 47.1
SGA_v2.0_scaffold38G15060 Striga asiatica HOM05D000254 ORTHO05D000165 4.6e-10 67.8 55 50.9
CARHR225730 Cardamine hirsuta HOM05D000254 ORTHO05D000165 7.9e-10 67.0 71 43.7
Thhalv10002288m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 7.9e-10 67.0 74 39.2
Thhalv10015352m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 7.9e-10 67.0 68 44.1
Hund22477 Selenicereus undatus HOM05D000254 ORTHO05D000165 7.9e-10 67.0 57 49.1
Hund22828 Selenicereus undatus HOM05D000254 ORTHO05D000165 7.9e-10 67.0 57 49.1
Sopen03g006690 Solanum pennellii HOM05D000254 ORTHO05D000165 7.9e-10 67.0 64 46.9
Sopen11g008380 Solanum pennellii HOM05D000254 ORTHO05D000165 1.0e-09 66.6 64 48.4
PSO765G0063 Papaver somniferum HOM05D000254 ORTHO05D000165 1.4e-09 66.2 66 48.5
Hund14883 Selenicereus undatus HOM05D000254 ORTHO05D000165 1.4e-09 66.2 57 49.1
CARHR180580 Cardamine hirsuta HOM05D000254 ORTHO05D000165 2.3e-09 65.5 56 50.0
Thhalv10023173m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 3.0e-09 65.1 56 44.6
MD12G1083800 Malus domestica HOM05D000254 ORTHO05D000165 3.0e-09 65.1 56 48.2
PSO339G0258 Papaver somniferum HOM05D000254 ORTHO05D000165 3.0e-09 65.1 57 49.1
Hund01117 Selenicereus undatus HOM05D000254 ORTHO05D000165 3.0e-09 65.1 57 49.1
TPR.G15547 Trifolium pratense HOM05D000254 ORTHO05D000165 3.0e-09 65.1 61 47.5
Oeu050425.1 Olea europaea HOM05D000254 ORTHO05D000165 3.9e-09 64.7 50 54.0
Migut.O00020 Erythranthe guttata HOM05D000254 ORTHO05D000165 5.1e-09 64.3 62 45.2
PSO170G5876 Papaver somniferum HOM05D000254 ORTHO05D000165 5.1e-09 64.3 66 48.5
CARHR216170 Cardamine hirsuta HOM05D000254 ORTHO05D000165 6.7e-09 63.9 67 41.8
TWI15G1142 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 6.7e-09 63.9 66 42.4
PSO063G4322 Papaver somniferum HOM05D000254 ORTHO05D000165 8.8e-09 63.5 59 47.5
PSO170G0724 Papaver somniferum HOM05D000254 ORTHO05D000165 8.8e-09 63.5 66 48.5
PSO782G0797 Papaver somniferum HOM05D000254 ORTHO05D000165 8.8e-09 63.5 66 47.0
Solyc05g045690.1 Solanum lycopersicum HOM05D000254 ORTHO05D000165 8.8e-09 63.5 64 46.9
SGA_v2.0_scaffold219G42580 Striga asiatica HOM05D000254 ORTHO05D000165 8.8e-09 63.5 55 49.1
Ah.00g000220 Amaranthus hybridus HOM05D000254 ORTHO05D000165 1.1e-08 63.2 63 44.4
CARHR150900 Cardamine hirsuta HOM05D000254 ORTHO05D000165 1.1e-08 63.2 64 43.8
PSO339G4772 Papaver somniferum HOM05D000254 ORTHO05D000165 1.1e-08 63.2 55 49.1
PSO384G2300 Papaver somniferum HOM05D000254 ORTHO05D000165 1.1e-08 63.2 55 49.1
CANSAT78G1301 Cannabis sativa HOM05D000254 ORTHO05D000165 1.5e-08 62.8 56 44.6
PSO339G3116 Papaver somniferum HOM05D000254 ORTHO05D000165 1.5e-08 62.8 58 46.6
Ah.08g211160 Amaranthus hybridus HOM05D000254 ORTHO05D000165 1.9e-08 62.4 63 44.4
arahy.Tifrunner.gnm1.ann1.LIB7TV Arachis hypogaea HOM05D000254 ORTHO05D000165 1.9e-08 62.4 69 39.1
Lj1g0021543 Lotus japonicus HOM05D000254 ORTHO05D000165 1.9e-08 62.4 44 52.3
PSO063G1384 Papaver somniferum HOM05D000254 ORTHO05D000165 1.9e-08 62.4 66 47.0
Oeu007944.1 Olea europaea HOM05D000254 ORTHO05D000165 2.5e-08 62.0 55 50.9
Oeu037412.2 Olea europaea HOM05D004986 ORTHO05D005898 2.5e-08 62.0 35 62.9
SGA_v2.0_scaffold8G04504 Striga asiatica HOM05D000254 ORTHO05D000165 2.5e-08 62.0 55 47.3
TWI31G0240 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 2.5e-08 62.0 74 40.5
Ah.15g097690 Amaranthus hybridus HOM05D000254 ORTHO05D000165 3.3e-08 61.6 58 41.4
Oeu026773.1 Olea europaea HOM05D000254 ORTHO05D000165 3.3e-08 61.6 55 50.9
PSO782G1022 Papaver somniferum HOM05D000254 ORTHO05D000165 3.3e-08 61.6 46 54.3
HanXRQChr17g0561321 Helianthus annuus HOM05D000254 ORTHO05D000165 4.3e-08 61.2 59 45.8
Oeu020155.1 Olea europaea HOM05D000254 ORTHO05D000165 4.3e-08 61.2 56 46.4
Oeu024488.1 Olea europaea HOM05D000254 ORTHO05D000165 4.3e-08 61.2 64 48.4
Oeu040560.1 Olea europaea HOM05D000254 ORTHO05D000165 4.3e-08 61.2 62 45.2
TWI31G1367 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 5.7e-08 60.8 74 39.2
Zm00001eb082490 Zea mays HOM05D000254 ORTHO05D000165 5.7e-08 60.8 58 46.6
Zm00001eb339580 Zea mays HOM05D000254 ORTHO05D000165 5.7e-08 60.8 58 46.6
Zm00001eb384120 Zea mays HOM05D000254 ORTHO05D000165 5.7e-08 60.8 58 46.6
Thhalv10015783m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 7.4e-08 60.5 54 44.4
FvH4_4g08751 Fragaria vesca HOM05D000254 ORTHO05D000165 7.4e-08 60.5 56 42.9
PSO170G0697 Papaver somniferum HOM05D000254 ORTHO05D000165 7.4e-08 60.5 49 51.0
Zm00001eb162640 Zea mays HOM05D000254 ORTHO05D000165 7.4e-08 60.5 58 46.6
Ah.11g042400 Amaranthus hybridus HOM05D000254 ORTHO05D000165 9.7e-08 60.1 63 44.4
PGSC0003DMG400015884 Solanum tuberosum HOM05D000254 ORTHO05D000165 9.7e-08 60.1 53 50.9
CANSAT01G2927 Cannabis sativa HOM05D000254 ORTHO05D000165 1.7e-07 59.3 65 41.5
CANSAT54G2521 Cannabis sativa HOM05D000254 ORTHO05D000165 1.7e-07 59.3 65 41.5
Ciclev10029993m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.7e-07 59.3 67 43.3
Oeu046850.1 Olea europaea HOM05D000254 ORTHO05D000165 1.7e-07 59.3 57 45.6
Ciclev10023986m.g Citrus clementina HOM05D000254 ORTHO05D000165 2.2e-07 58.9 67 43.3
Ciclev10024121m.g Citrus clementina HOM05D000254 ORTHO05D000165 2.2e-07 58.9 57 43.9
Lj3g0023878 Lotus japonicus HOM05D000254 ORTHO05D000165 2.2e-07 58.9 55 52.7
PSO782G1155 Papaver somniferum HOM05D000254 ORTHO05D000165 2.2e-07 58.9 55 45.5
Thhalv10011948m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 2.8e-07 58.5 51 45.1
Medtr8g032820 Medicago truncatula HOM05D000254 ORTHO05D000165 2.8e-07 58.5 64 43.8
QL02p026275 Quercus lobata HOM05D000254 ORTHO05D000165 2.8e-07 58.5 67 44.8
Oeu014787.1 Olea europaea HOM05D000254 ORTHO05D000165 3.7e-07 58.2 55 49.1
Oeu023369.1 Olea europaea HOM05D000254 ORTHO05D000165 3.7e-07 58.2 56 44.6
Oeu032739.1 Olea europaea HOM05D005901 ORTHO05D000165 3.7e-07 58.2 35 60.0
PSO675G0288 Papaver somniferum HOM05D000254 ORTHO05D000165 3.7e-07 58.2 43 55.8
PSO832G3724 Papaver somniferum HOM05D000254 ORTHO05D000165 3.7e-07 58.2 43 55.8
Hund11946 Selenicereus undatus HOM05D008335 ORTHO05D010315 3.7e-07 58.2 38 65.8
Medtr1g074400 Medicago truncatula HOM05D018640 ORTHO05D019825 4.8e-07 57.8 41 58.5
PSO729G0193 Papaver somniferum HOM05D000254 ORTHO05D000165 4.8e-07 57.8 65 43.1
Oeu015426.2 Olea europaea HOM05D000254 ORTHO05D000165 6.3e-07 57.4 35 60.0
Oeu028032.1 Olea europaea HOM05D000254 ORTHO05D000165 6.3e-07 57.4 35 57.1
CANSAT78G0474 Cannabis sativa HOM05D000254 ORTHO05D000165 8.2e-07 57.0 65 40.0
Aqoxy1G03125 Aquilegia oxysepala HOM05D000254 ORTHO05D000165 1.1e-06 56.6 75 40.0
Oeu059570.1 Olea europaea HOM05D000254 ORTHO05D000165 1.4e-06 56.2 64 43.8
Ciclev10023755m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.8e-06 55.8 57 42.1
ECA233G1917 Erigeron canadensis HOM05D000254 ORTHO05D000165 1.8e-06 55.8 48 50.0
Oeu003336.1 Olea europaea HOM05D000254 ORTHO05D000165 2.4e-06 55.5 35 57.1
Oeu040797.1 Olea europaea HOM05D000254 ORTHO05D000165 2.4e-06 55.5 35 57.1
SGA_v2.0_scaffold19G08785 Striga asiatica HOM05D000254 ORTHO05D000165 2.4e-06 55.5 71 42.3
PSO144G0153 Papaver somniferum HOM05D000254 ORTHO05D000165 3.1e-06 55.1 55 45.5
CANSAT11G2418 Cannabis sativa HOM05D000254 ORTHO05D000165 4.1e-06 54.7 65 38.5
CANSAT56G1760 Cannabis sativa HOM05D000254 ORTHO05D000165 5.3e-06 54.3 65 41.5
Lj5g0002707 Lotus japonicus HOM05D000254 ORTHO05D000165 5.3e-06 54.3 58 34.5
Glyma.01G009100 Glycine max HOM05D000254 ORTHO05D000165 6.9e-06 53.9 58 34.5
Glyma.01G024100 Glycine max HOM05D000254 ORTHO05D000165 6.9e-06 53.9 58 34.5
Glyma.08G271300 Glycine max HOM05D000254 ORTHO05D000165 6.9e-06 53.9 58 34.5
Glyma.10G132701 Glycine max HOM05D000254 ORTHO05D000165 6.9e-06 53.9 58 34.5
Glyma.10G133300 Glycine max HOM05D000254 ORTHO05D000165 6.9e-06 53.9 58 34.5
Glyma.10G133400 Glycine max HOM05D000254 ORTHO05D000165 6.9e-06 53.9 58 34.5
Glyma.14G102400 Glycine max HOM05D000254 ORTHO05D000165 6.9e-06 53.9 58 34.5
Glyma.15G258000 Glycine max HOM05D000254 ORTHO05D000165 6.9e-06 53.9 58 34.5
Glyma.17G162400 Glycine max HOM05D000254 ORTHO05D000165 6.9e-06 53.9 58 34.5
Glyma.18G099300 Glycine max HOM05D000254 ORTHO05D000165 6.9e-06 53.9 58 34.5
Oeu051221.1 Olea europaea HOM05D000254 ORTHO05D000165 6.9e-06 53.9 35 60.0
Oeu059068.1 Olea europaea HOM05D000254 ORTHO05D000165 6.9e-06 53.9 55 45.5
PSO675G1195 Papaver somniferum HOM05D000254 ORTHO05D000165 6.9e-06 53.9 69 40.6
PSO782G5171 Papaver somniferum HOM05D000254 ORTHO05D000165 6.9e-06 53.9 61 44.3
Ciclev10003781m.g Citrus clementina HOM05D000254 ORTHO05D000165 9.1e-06 53.5 40 52.5
Lj3g0010857 Lotus japonicus HOM05D000254 ORTHO05D000165 9.1e-06 53.5 68 38.2
Lj6g0003945 Lotus japonicus HOM05D000254 ORTHO05D000165 9.1e-06 53.5 57 38.6


User provided reference genes

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