Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32909 Trifolium pratense HOM05D003666 ORTHO05D004770 2.9e-51 204.9 100 100.0
Lalb_Chr00c24g0407401 Lupinus albus HOM05D003666 ORTHO05D004770 6.0e-25 117.5 66 86.4
Lalb_Chr00c54g0413611 Lupinus albus HOM05D003666 ORTHO05D004770 6.0e-25 117.5 66 86.4
Medtr0082s0090 Medicago truncatula HOM05D003666 ORTHO05D004770 6.0e-25 117.5 66 86.4
TPR.G36115 Trifolium pratense HOM05D003666 ORTHO05D004770 6.0e-25 117.5 66 86.4
arahy.Tifrunner.gnm1.ann1.U43JHG Arachis hypogaea HOM05D003666 ORTHO05D004770 1.0e-24 116.7 66 84.8
arahy.Tifrunner.gnm1.ann1.WXF1XT Arachis hypogaea HOM05D003666 ORTHO05D004770 1.0e-24 116.7 66 84.8
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 2.3e-24 115.5 66 84.8
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 2.3e-24 115.5 66 84.8
Potri.007G061861 Populus trichocarpa HOM05D003666 ORTHO05D004770 6.6e-24 114.0 66 83.3
CDE02G1260 Ceratophyllum demersum HOM05D003666 ORTHO05D004770 8.7e-24 113.6 66 83.3
Aa31csc553G70 Aethionema arabicum HOM05D003666 ORTHO05D004770 1.5e-23 112.8 65 84.6
BNapus_Darmor_BZH_scaffold_234p00230 Brassica napus HOM05D003666 ORTHO05D004770 1.5e-23 112.8 65 84.6
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 1.5e-23 112.8 65 84.6
BraSC48t46269Z Brassica rapa HOM05D003666 ORTHO05D004770 1.5e-23 112.8 65 84.6
RcHm_v2.0_MTg0498711 Rosa chinensis HOM05D003666 ORTHO05D004770 1.9e-23 112.5 65 84.6
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 2.5e-23 112.1 66 81.8
Aqoxy12s018 Aquilegia oxysepala HOM05D003666 ORTHO05D004770 5.6e-23 110.9 66 81.8
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 5.6e-23 110.9 66 81.8
TAR626G1001 Trochodendron aralioides HOM05D003666 ORTHO05D004770 5.6e-23 110.9 66 81.8
CANSAT16G0036 Cannabis sativa HOM05D003666 ORTHO05D004770 7.3e-23 110.5 65 83.1
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 1.3e-22 109.8 66 81.8
Lj2C1223T18 Lonicera japonica HOM05D003666 ORTHO05D004770 1.3e-22 109.8 66 81.8
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 2.1e-22 109.0 65 83.1
BcaC05g26880 Brassica carinata HOM05D003666 ORTHO05D004770 2.1e-22 109.0 65 83.1
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 2.8e-22 108.6 65 83.1
Lsat_1_v5_gn_8_46780 Lactuca sativa HOM05D003666 ORTHO05D004770 2.8e-22 108.6 65 83.1
CARHR288310 Cardamine hirsuta HOM05D003666 ORTHO05D004770 3.6e-22 108.2 65 81.5
Thhalv10015926m.g Eutrema salsugineum HOM05D003666 ORTHO05D004770 8.1e-22 107.1 65 81.5
Glyma.10G098500 Glycine max HOM05D003666 ORTHO05D004770 8.1e-22 107.1 65 80.0
Nitab4.5_0006007g0010 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.1e-21 106.7 65 81.5
Solyc00g500172.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.1e-21 106.7 65 81.5
Solyc00g500189.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.1e-21 106.7 65 81.5
Solyc00g500253.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.1e-21 106.7 65 81.5
BcaC05g26875 Brassica carinata HOM05D003666 ORTHO05D004770 1.4e-21 106.3 65 81.5
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 1.8e-21 105.9 66 77.3
BolSC28t60438H Brassica oleracea HOM05D003666 ORTHO05D004770 5.3e-21 104.4 61 83.6
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 9.0e-21 103.6 65 80.0
Ah.10g028200 Amaranthus hybridus HOM05D003666 ORTHO05D004770 3.4e-20 101.7 65 80.0
Ah.10g028750 Amaranthus hybridus HOM05D003666 ORTHO05D004770 3.4e-20 101.7 65 80.0
Solyc10g061990.3 Solanum lycopersicum HOM05D003666 ORTHO05D004770 8.7e-16 87.0 65 67.7
Gorai.001G166300 Gossypium raimondii HOM05D003666 ORTHO05D004770 3.3e-15 85.1 59 69.5
SEGI_23011 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 1.4e-13 79.7 65 63.1
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 2.2e-11 72.4 45 80.0
BolC6t36214H Brassica oleracea HOM05D003666 ORTHO05D004770 1.6e-09 66.2 57 66.7
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 5.1e-08 61.2 49 65.3
Nitab4.5_0000172g0120 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.9e-07 59.3 39 71.8
SHI04382 Sapria himalayana HOM05D003666 ORTHO05D004770 2.8e-06 55.5 37 67.6


User provided reference genes

Program Settings