Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G329 Trifolium pratense HOM05D000299 ORTHO05D000079 1.9e-58 229.2 132 100.0
Medtr8g076340 Medicago truncatula HOM05D000299 ORTHO05D000079 7.1e-42 174.1 135 71.1
Psat4g097200 Pisum sativum HOM05D000299 ORTHO05D000079 5.0e-27 124.8 122 63.9
Lj4g0003085 Lotus japonicus HOM05D000299 ORTHO05D000079 5.2e-16 88.2 135 46.7
Glyma.01G169400 Glycine max HOM05D000299 ORTHO05D000079 1.4e-13 80.1 129 42.6
TPR.G33368 Trifolium pratense HOM05D000299 ORTHO05D000079 4.1e-13 78.6 39 100.0
Phvul.003G258900 Phaseolus vulgaris HOM05D000299 ORTHO05D000079 1.0e-11 73.9 135 37.8
Medtr5g021340 Medicago truncatula HOM05D000299 ORTHO05D000079 1.7e-11 73.2 121 45.5
Lalb_Chr05g0212491 Lupinus albus HOM05D000299 ORTHO05D000079 2.2e-11 72.8 130 46.9
TPR.G2348 Trifolium pratense HOM05D000299 ORTHO05D000079 2.9e-11 72.4 114 50.0
VMungo0251G0146 Vigna mungo HOM05D000299 ORTHO05D000079 5.0e-11 71.6 132 36.4
QL06p034159 Quercus lobata HOM05D000299 ORTHO05D000079 8.5e-11 70.9 115 40.9
Ciclev10025844m.g Citrus clementina HOM05D000299 ORTHO05D000079 1.5e-10 70.1 121 35.5
Psat2g156360 Pisum sativum HOM05D000299 ORTHO05D000079 2.5e-10 69.3 108 44.4
Gohir.A11G042700 Gossypium hirsutum HOM05D000299 ORTHO05D000079 4.2e-10 68.6 119 41.2
Gorai.007G049700 Gossypium raimondii HOM05D000299 ORTHO05D000079 4.2e-10 68.6 120 42.5
VMungo1215G1458 Vigna mungo HOM05D000299 ORTHO05D000079 4.2e-10 68.6 119 37.8
Sp7g23190 Schrenkiella parvula HOM05D000299 ORTHO05D000079 7.2e-10 67.8 130 40.0
Phvul.002G112000 Phaseolus vulgaris HOM05D000299 ORTHO05D000079 9.4e-10 67.4 121 38.8
Gohir.D11G046260 Gossypium hirsutum HOM05D000299 ORTHO05D000079 1.2e-09 67.0 122 39.3
Oeu029799.1 Olea europaea HOM05D000299 ORTHO05D000079 1.6e-09 66.6 125 40.8
THA.LOC104819188 Tarenaya hassleriana HOM05D000299 ORTHO05D000079 2.1e-09 66.2 129 33.3
TAR625G0760 Trochodendron aralioides HOM05D000299 ORTHO05D000079 2.1e-09 66.2 125 37.6
Duzib264G0141 Durio zibethinus HOM05D000299 ORTHO05D000079 2.7e-09 65.9 128 39.8
Nitab4.5_0004086g0060 Nicotiana tabacum HOM05D000299 ORTHO05D000079 2.7e-09 65.9 133 34.6
CiPaw.08G136000 Carya illinoinensis HOM05D000299 ORTHO05D000079 3.6e-09 65.5 104 41.3
Duzib147G0610 Durio zibethinus HOM05D000299 ORTHO05D000079 6.1e-09 64.7 119 32.8
Nn5g29203 Nelumbo nucifera HOM05D000299 ORTHO05D000079 6.1e-09 64.7 88 44.3
Manes.02G099500 Manihot esculenta HOM05D000299 ORTHO05D000079 8.0e-09 64.3 127 35.4
Nitab4.5_0002266g0100 Nicotiana tabacum HOM05D000299 ORTHO05D000079 8.0e-09 64.3 133 34.6
Lalb_Chr09g0321981 Lupinus albus HOM05D000299 ORTHO05D000079 1.0e-08 63.9 129 46.5
Hma1.2p1_1898F.1_g306900 Hydrangea macrophylla HOM05D000299 ORTHO05D000079 1.8e-08 63.2 124 45.2
Migut.L00033 Erythranthe guttata HOM05D000299 ORTHO05D000079 2.3e-08 62.8 138 34.8
Peaxi162Scf00083g00169 Petunia axillaris HOM05D000299 ORTHO05D000079 2.3e-08 62.8 130 34.6
C01p20590 Brassica napus HOM05D000299 ORTHO05D000079 3.0e-08 62.4 110 34.5
THA.LOC104821315 Tarenaya hassleriana HOM05D000299 ORTHO05D000079 3.0e-08 62.4 117 34.2
Thecc.01G024200 Theobroma cacao HOM05D000299 ORTHO05D000079 3.0e-08 62.4 128 39.1
CiPaw.07G055400 Carya illinoinensis HOM05D000299 ORTHO05D000079 4.0e-08 62.0 140 40.0
Sabra05G0096600 Salix brachista HOM05D000299 ORTHO05D000079 4.0e-08 62.0 119 36.1
CsaV3_4G005280 Cucumis sativus L. HOM05D000299 ORTHO05D000079 5.2e-08 61.6 139 35.3
TWI73G1295 Tripterygium wilfordii HOM05D000299 ORTHO05D000079 5.2e-08 61.6 110 40.0
Dinv33596 Davidia involucrata HOM05D000299 ORTHO05D000079 6.7e-08 61.2 144 41.7
Potri.007G016600 Populus trichocarpa HOM05D000299 ORTHO05D000079 6.7e-08 61.2 126 38.1
GSVIVG01018833001 Vitis vinifera HOM05D000299 ORTHO05D000079 6.7e-08 61.2 132 34.8
AT5G66320 Arabidopsis thaliana HOM05D000299 ORTHO05D000079 8.8e-08 60.8 115 34.8
Cfa006935 Carpinus fangiana HOM05D000299 ORTHO05D000079 8.8e-08 60.8 129 43.4
COL.COLO4_21970 Corchorus olitorius HOM05D000299 ORTHO05D000079 8.8e-08 60.8 126 44.4
Haze_03815 Corylus avellana HOM05D000299 ORTHO05D000079 8.8e-08 60.8 124 42.7
Potri.005G117600 Populus trichocarpa HOM05D000299 ORTHO05D000079 8.8e-08 60.8 117 36.8
CARHR281390 Cardamine hirsuta HOM05D000299 ORTHO05D000079 1.2e-07 60.5 108 35.2
Lj2g0003413 Lotus japonicus HOM05D000299 ORTHO05D000079 1.2e-07 60.5 105 45.7
Oeu037727.1 Olea europaea HOM05D000299 ORTHO05D000079 1.2e-07 60.5 120 36.7
PGSC0003DMG400012014 Solanum tuberosum HOM05D000299 ORTHO05D000079 1.2e-07 60.5 109 36.7
Aqoxy5G01500 Aquilegia oxysepala HOM05D000299 ORTHO05D000079 1.5e-07 60.1 114 38.6
Gohir.A11G178600 Gossypium hirsutum HOM05D000299 ORTHO05D000079 1.5e-07 60.1 136 35.3
TAR628G1636 Trochodendron aralioides HOM05D000299 ORTHO05D000079 1.5e-07 60.1 124 40.3
Atru.chr3.759 Acer truncatum HOM05D000299 ORTHO05D000079 2.0e-07 59.7 132 33.3
BcaC09g50800 Brassica carinata HOM05D000299 ORTHO05D000079 2.0e-07 59.7 110 33.6
A09p10040 Brassica napus HOM05D000299 ORTHO05D000079 2.0e-07 59.7 95 38.9
Gohir.D11G186200 Gossypium hirsutum HOM05D000299 ORTHO05D000079 2.0e-07 59.7 136 39.7
CANSAT01G2979 Cannabis sativa HOM05D000299 ORTHO05D000079 2.6e-07 59.3 108 41.7
CiPaw.13G031100 Carya illinoinensis HOM05D000299 ORTHO05D000079 2.6e-07 59.3 90 41.1
ClCG07G008920 Citrullus lanatus HOM05D000299 ORTHO05D000079 2.6e-07 59.3 119 34.5
Dinv40051 Davidia involucrata HOM05D000299 ORTHO05D000079 2.6e-07 59.3 139 33.1
BolC1t01990H Brassica oleracea HOM05D000299 ORTHO05D000079 3.3e-07 58.9 110 33.6
CSS0041287 Camellia sinensis var. sinensis HOM05D000299 ORTHO05D000079 3.3e-07 58.9 126 33.3
Glyma.02G051100 Glycine max HOM05D000299 ORTHO05D000079 3.3e-07 58.9 135 50.4
PSO210G2859 Papaver somniferum HOM05D000299 ORTHO05D000079 3.3e-07 58.9 83 42.2
Sabra07G0013800 Salix brachista HOM05D000299 ORTHO05D000079 3.3e-07 58.9 125 36.0
Aa31LG1G14820 Aethionema arabicum HOM05D000299 ORTHO05D000079 4.4e-07 58.5 113 36.3
BcaNung04508 Brassica carinata HOM05D000299 ORTHO05D000079 4.4e-07 58.5 91 38.5
BraA09t36647Z Brassica rapa HOM05D000299 ORTHO05D000079 4.4e-07 58.5 94 39.4
Thhalv10004566m.g Eutrema salsugineum HOM05D000299 ORTHO05D000079 4.4e-07 58.5 111 35.1
BcaC04g23119 Brassica carinata HOM05D000299 ORTHO05D000079 5.7e-07 58.2 107 36.4
MELO3C027391.2 Cucumis melo HOM05D000299 ORTHO05D000079 5.7e-07 58.2 135 34.1
PSO170G2505 Papaver somniferum HOM05D000299 ORTHO05D000079 5.7e-07 58.2 83 42.2
AL8G45200 Arabidopsis lyrata HOM05D000299 ORTHO05D000079 7.5e-07 57.8 112 35.7
PSO675G1458 Papaver somniferum HOM05D000299 ORTHO05D000079 7.5e-07 57.8 104 39.4
BraA01t01599Z Brassica rapa HOM05D000299 ORTHO05D000079 9.7e-07 57.4 110 32.7
Cc07_g10350 Coffea canephora HOM05D000299 ORTHO05D000079 1.3e-06 57.0 89 41.6
PGSC0003DMG400003545 Solanum tuberosum HOM05D000299 ORTHO05D000079 1.7e-06 56.6 133 34.6
A01p16440 Brassica napus HOM05D000299 ORTHO05D000079 2.2e-06 56.2 110 32.7
BcaNung05274 Brassica carinata HOM05D000299 ORTHO05D000079 2.8e-06 55.8 94 38.3
C09p11900 Brassica napus HOM05D000299 ORTHO05D000079 2.8e-06 55.8 94 38.3
BolC9t54078H Brassica oleracea HOM05D000299 ORTHO05D000079 2.8e-06 55.8 94 38.3
PSO541G2282 Papaver somniferum HOM05D000299 ORTHO05D000079 2.8e-06 55.8 104 37.5
TAR381G0055 Trochodendron aralioides HOM05D000299 ORTHO05D000079 2.8e-06 55.8 130 33.1
arahy.Tifrunner.gnm1.ann1.54XSGH Arachis hypogaea HOM05D000299 ORTHO05D000079 3.7e-06 55.5 111 38.7
arahy.Tifrunner.gnm1.ann1.5U2LX3 Arachis hypogaea HOM05D000299 ORTHO05D000079 3.7e-06 55.5 111 38.7
Prupe.7G164500 Prunus persica HOM05D000299 ORTHO05D000079 3.7e-06 55.5 128 35.2
PGR119G2398 Punica granatum HOM05D000299 ORTHO05D000079 3.7e-06 55.5 89 39.3
Rhsim08G0036000 Rhododendron simsii HOM05D000299 ORTHO05D000079 3.7e-06 55.5 134 30.6
CSS0042176 Camellia sinensis var. sinensis HOM05D000299 ORTHO05D000079 4.8e-06 55.1 131 35.1
Thhalv10025666m.g Eutrema salsugineum HOM05D000299 ORTHO05D000079 4.8e-06 55.1 124 37.1
Carub.0008s2817 Capsella rubella HOM05D000299 ORTHO05D000079 6.3e-06 54.7 106 35.8
FAN28G1756 Fragaria x ananassa HOM05D000299 ORTHO05D000079 6.3e-06 54.7 114 36.0
TWI14G0510 Tripterygium wilfordii HOM05D000299 ORTHO05D000079 8.2e-06 54.3 100 36.0


User provided reference genes

Program Settings