Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 1.1e-112 409.8 190 100.0
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 2.5e-88 328.9 161 94.4
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 4.0e-86 321.6 161 91.3
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 5.2e-86 321.2 160 91.2
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 4.9e-84 314.7 161 90.1
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 1.2e-79 300.1 161 85.7
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 2.1e-79 299.3 161 84.5
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 3.4e-77 292.0 161 82.6
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 6.4e-76 287.7 161 82.0
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 1.1e-75 287.0 163 79.1
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 1.1e-75 287.0 162 79.6
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.4e-75 286.6 157 82.8
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 1.9e-75 286.2 161 82.0
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.9e-75 286.2 161 81.4
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.9e-75 286.2 161 81.4
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 2.4e-75 285.8 160 81.2
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 5.4e-75 284.6 162 77.2
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 5.4e-75 284.6 160 79.4
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 9.2e-75 283.9 162 76.5
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 9.2e-75 283.9 161 77.6
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.2e-74 283.5 161 80.7
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 6.0e-74 281.2 161 78.3
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 6.0e-74 281.2 161 77.0
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 7.8e-74 280.8 161 77.0
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.0e-73 280.4 158 79.1
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 1.0e-73 280.4 161 76.4
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 1.0e-73 280.4 162 78.4
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 1.3e-73 280.0 161 76.4
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 1.3e-73 280.0 162 76.5
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 3.0e-73 278.9 157 79.6
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 3.0e-73 278.9 161 76.4
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 3.9e-73 278.5 161 76.4
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 5.1e-73 278.1 158 78.5
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 6.6e-73 277.7 161 76.4
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 6.6e-73 277.7 159 78.6
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 6.6e-73 277.7 159 78.6
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 8.6e-73 277.3 158 79.1
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 8.6e-73 277.3 161 77.0
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 8.6e-73 277.3 161 77.0
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 1.1e-72 276.9 158 79.1
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 1.5e-72 276.6 161 78.3
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 1.5e-72 276.6 161 76.4
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 1.9e-72 276.2 152 82.2
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 2.5e-72 275.8 161 74.5
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 2.5e-72 275.8 159 78.0
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 2.5e-72 275.8 161 77.6
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 2.5e-72 275.8 161 76.4
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 3.3e-72 275.4 158 78.5
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 3.3e-72 275.4 158 77.8
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 5.6e-72 274.6 161 75.2
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 9.5e-72 273.9 161 77.6
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 1.2e-71 273.5 157 77.7
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 1.6e-71 273.1 162 77.8
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 1.6e-71 273.1 156 78.8
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 2.1e-71 272.7 169 72.8
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 2.1e-71 272.7 161 75.8
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 2.1e-71 272.7 161 77.6
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 4.7e-71 271.6 167 72.5
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 4.7e-71 271.6 158 75.9
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 1.4e-70 270.0 160 75.6
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 1.4e-70 270.0 154 77.9
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.8e-70 269.6 151 81.5
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 1.8e-70 269.6 161 75.8
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 2.3e-70 269.2 160 76.2
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.3e-70 269.2 160 76.2
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.3e-70 269.2 160 76.2
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 5.2e-70 268.1 161 76.4
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 1.2e-69 266.9 161 75.8
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 1.5e-69 266.5 161 74.5
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 2.0e-69 266.2 158 76.6
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 2.6e-69 265.8 154 76.6
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.6e-69 265.8 154 77.9
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 3.4e-69 265.4 162 75.9
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 5.8e-69 264.6 155 78.1
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 7.6e-69 264.2 154 76.0
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 4.9e-68 261.5 161 72.7
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 1.1e-67 260.4 161 71.4
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 3.2e-67 258.8 162 72.8
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 4.1e-67 258.5 161 72.7
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 5.4e-67 258.1 157 72.0
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 7.1e-67 257.7 161 70.2
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.2e-66 256.9 161 70.8
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.6e-66 256.5 161 69.6
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 1.6e-66 256.5 157 74.5
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 2.7e-66 255.8 152 75.0
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 2.7e-66 255.8 163 69.9
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 6.0e-66 254.6 160 73.1
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 2.3e-65 252.7 161 73.3
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 2.3e-65 252.7 161 73.3
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 2.3e-65 252.7 161 69.6
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 3.0e-65 252.3 148 79.7
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 8.6e-65 250.8 162 70.4
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 1.9e-64 249.6 214 56.1
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 1.2e-63 246.9 137 80.3
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 8.9e-62 240.7 155 67.7
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 8.9e-62 240.7 152 69.1
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 1.5e-61 240.0 156 69.9
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 7.6e-61 237.7 121 89.3
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 4.9e-60 235.0 138 76.8
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 3.2e-59 232.3 135 76.3
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.1e-58 229.6 135 74.8
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 6.6e-57 224.6 138 73.9
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 2.5e-56 222.6 138 71.0
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 3.6e-55 218.8 152 69.1
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 5.3e-54 214.9 117 82.1
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 1.2e-53 213.8 188 56.9
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 1.6e-50 203.4 113 78.8
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 7.9e-50 201.1 112 79.5
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 3.9e-49 198.7 142 58.5
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 4.3e-48 195.3 116 75.9
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 4.3e-48 195.3 112 79.5
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 9.6e-48 194.1 146 56.8
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.3e-47 193.7 181 55.8
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 2.8e-47 192.6 142 57.0
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 4.0e-46 188.7 132 64.4
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 5.3e-46 188.3 109 77.1
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 9.0e-46 187.6 112 74.1
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 4.2e-43 178.7 105 75.2
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 3.5e-42 175.6 96 82.3
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 1.1e-38 164.1 102 67.6
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 7.6e-37 157.9 157 55.4
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 6.5e-36 154.8 85 82.4
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 7.1e-35 151.4 135 57.8
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 1.2e-34 150.6 168 48.2
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 4.3e-32 142.1 87 73.6
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 7.9e-26 121.3 67 83.6
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 6.1e-18 95.1 57 71.9
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 2.2e-15 86.7 60 65.0
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 1.7e-07 60.5 68 44.1


User provided reference genes

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