Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3283 Trifolium pratense HOM05D011629 ORTHO05D013267 1.8e-234 815.5 389 100.0
TPR.G3308 Trifolium pratense HOM05D011629 ORTHO05D013267 3.3e-151 538.9 371 73.0
Medtr3g011190 Medicago truncatula HOM05D011629 ORTHO05D013267 3.5e-105 386.0 393 52.9
Psat2g144440 Pisum sativum HOM05D011629 ORTHO05D013267 3.1e-93 346.3 390 46.2
Psat5g225320 Pisum sativum HOM05D011629 ORTHO05D013267 1.8e-88 330.5 384 45.3
Medtr4g009850 Medicago truncatula HOM05D011629 ORTHO05D013267 4.1e-85 319.3 326 51.2
Psat5g225280 Pisum sativum HOM05D011629 ORTHO05D013267 5.7e-79 298.9 272 55.5
Medtr3g011540 Medicago truncatula HOM05D011629 ORTHO05D013267 1.4e-72 277.7 241 56.8
Psat5g225160 Pisum sativum HOM05D011629 ORTHO05D013267 1.8e-64 250.8 274 46.7
COL.COLO4_14086 Corchorus olitorius HOM05D011629 ORTHO05D013267 1.1e-26 125.2 289 29.8
COL.COLO4_14085 Corchorus olitorius HOM05D000206 ORTHO05D002863 1.9e-26 124.4 287 29.3
QL09p019845 Quercus lobata HOM05D011629 ORTHO05D013267 3.3e-26 123.6 330 27.6
CANSAT01G1414 Cannabis sativa HOM05D011629 ORTHO05D013267 2.8e-17 94.0 274 27.0
CANSAT01G0762 Cannabis sativa HOM05D011629 ORTHO05D013267 3.6e-17 93.6 274 27.0
Oeu009728.1 Olea europaea HOM05D008040 ORTHO05D010075 1.7e-14 84.7 150 35.3
COL.COLO4_10414 Corchorus olitorius HOM05D008040 ORTHO05D010075 4.1e-13 80.1 264 24.2
COL.COLO4_14087 Corchorus olitorius HOM05D011629 ORTHO05D013267 4.1e-13 80.1 112 33.0
COL.COLO4_31566 Corchorus olitorius HOM05D008040 ORTHO05D010075 7.1e-13 79.3 245 25.7
COL.COLO4_31564 Corchorus olitorius HOM05D008040 ORTHO05D010075 9.2e-13 79.0 357 24.6
COL.COLO4_31567 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.2e-12 78.6 259 27.8
COL.COLO4_31563 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.6e-12 78.2 249 25.7
Oeu009732.1 Olea europaea HOM05D001586 ORTHO05D001543 1.6e-12 78.2 151 33.8
COL.COLO4_12486 Corchorus olitorius HOM05D008040 ORTHO05D010075 4.6e-12 76.6 244 24.2
COL.COLO4_30844 Corchorus olitorius HOM05D008040 ORTHO05D010075 3.0e-11 73.9 242 24.0
COL.COLO4_10419 Corchorus olitorius HOM05D026534 ORTHO05D010075 1.1e-10 72.0 256 22.7
Nitab4.5_0005142g0030 Nicotiana tabacum HOM05D008040 ORTHO05D010075 7.3e-10 69.3 146 32.2
Thecc.03G152300 Theobroma cacao HOM05D011629 ORTHO05D013267 1.6e-09 68.2 184 28.3
Ciclev10006596m.g Citrus clementina HOM05D008040 ORTHO05D010075 2.1e-09 67.8 167 32.9
Rhsim11G0097300 Rhododendron simsii HOM05D061936 ORTHO05D010075 2.1e-09 67.8 233 28.8
Rhsim11G0097100 Rhododendron simsii HOM05D061936 ORTHO05D013267 2.8e-09 67.4 233 28.8
TWI77G0815 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 4.7e-09 66.6 134 31.3
TWI12G0677 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 6.2e-09 66.2 257 24.9
SGA_v2.0_scaffold147G36326 Striga asiatica HOM05D008040 ORTHO05D010075 1.8e-08 64.7 230 26.1
Ciclev10026974m.g Citrus clementina HOM05D008040 ORTHO05D010075 4.0e-08 63.5 150 33.3
CSS0013591 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 5.2e-08 63.2 259 26.3
Oeu045297.1 Olea europaea HOM05D008040 ORTHO05D010075 6.8e-08 62.8 148 29.1
CSS0010874 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.5e-07 61.6 259 25.9
Os07g0535100 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 1.5e-07 61.6 242 26.0
CSS0016313 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 3.4e-07 60.5 259 25.9
Os07g0535200 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 4.4e-07 60.1 136 30.1
Ah.07g206250 Amaranthus hybridus HOM05D008040 ORTHO05D010075 1.3e-06 58.5 228 25.0
COL.COLO4_14088 Corchorus olitorius HOM05D011629 ORTHO05D013267 2.9e-06 57.4 103 35.0
Rhsim01G0016800 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.9e-06 57.4 197 26.9
Rhsim01G0017900 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.9e-06 57.4 197 26.9
Os07g0535600 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 4.9e-06 56.6 220 27.7


User provided reference genes

Program Settings