Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 2.7e-67 258.5 124 100.0
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 1.8e-55 219.2 125 83.2
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 1.2e-54 216.5 123 83.7
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 5.8e-54 214.2 125 84.0
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 1.6e-51 206.1 123 76.4
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 1.6e-51 206.1 117 80.3
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 3.5e-51 204.9 119 79.0
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 1.8e-50 202.6 119 79.0
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 3.9e-50 201.4 125 76.8
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 3.9e-50 201.4 118 80.5
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 6.7e-50 200.7 120 75.8
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 8.7e-50 200.3 118 77.1
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 8.7e-50 200.3 117 76.9
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 1.5e-49 199.5 127 74.0
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 2.5e-49 198.7 119 75.6
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 3.3e-49 198.4 126 80.2
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 5.7e-49 197.6 117 76.9
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 7.4e-49 197.2 117 76.1
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 2.2e-48 195.7 117 76.9
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 2.8e-48 195.3 117 74.4
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 6.3e-48 194.1 125 70.4
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 8.2e-48 193.7 122 73.0
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 8.2e-48 193.7 116 75.9
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 8.2e-48 193.7 117 73.5
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 1.4e-47 193.0 117 75.2
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 1.8e-47 192.6 117 75.2
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 1.8e-47 192.6 117 75.2
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 2.4e-47 192.2 126 73.0
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 2.4e-47 192.2 115 74.8
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 4.1e-47 191.4 116 76.7
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 6.9e-47 190.7 126 71.4
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 6.9e-47 190.7 116 75.0
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 9.0e-47 190.3 122 71.3
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 1.5e-46 189.5 117 72.6
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 1.5e-46 189.5 116 72.4
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 2.0e-46 189.1 116 74.1
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 3.4e-46 188.3 117 71.8
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 4.5e-46 188.0 115 73.9
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 7.7e-46 187.2 116 75.0
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 2.2e-45 185.7 122 67.2
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 2.2e-45 185.7 134 67.2
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 2.9e-45 185.3 122 64.8
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 3.8e-45 184.9 122 68.9
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 3.8e-45 184.9 125 67.2
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 6.5e-45 184.1 116 69.0
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 8.5e-45 183.7 117 70.9
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 8.5e-45 183.7 117 66.7
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 8.5e-45 183.7 116 70.7
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 8.5e-45 183.7 117 70.1
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 8.5e-45 183.7 123 66.7
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 1.1e-44 183.3 116 68.1
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 1.4e-44 183.0 117 71.8
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 1.4e-44 183.0 126 69.8
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 1.9e-44 182.6 116 71.6
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 1.9e-44 182.6 125 66.4
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 2.5e-44 182.2 116 67.2
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 2.5e-44 182.2 116 69.8
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 3.2e-44 181.8 116 69.0
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 4.2e-44 181.4 116 69.0
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 4.2e-44 181.4 116 68.1
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 5.5e-44 181.0 118 72.9
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 5.5e-44 181.0 116 69.0
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 9.4e-44 180.3 120 63.3
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 1.2e-43 179.9 116 70.7
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 1.2e-43 179.9 105 78.1
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 1.6e-43 179.5 116 66.4
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 1.6e-43 179.5 116 66.4
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 1.6e-43 179.5 116 66.4
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 1.6e-43 179.5 116 66.4
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 1.6e-43 179.5 116 66.4
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 1.6e-43 179.5 163 57.1
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 2.7e-43 178.7 116 66.4
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 2.7e-43 178.7 124 71.0
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 3.6e-43 178.3 120 65.0
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 3.6e-43 178.3 116 65.5
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 4.6e-43 177.9 116 67.2
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 4.6e-43 177.9 116 65.5
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 7.9e-43 177.2 117 67.5
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 1.0e-42 176.8 119 67.2
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 1.4e-42 176.4 132 65.2
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 1.8e-42 176.0 118 67.8
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 2.5e-41 172.2 100 74.0
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 3.7e-40 168.3 108 72.2
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 8.2e-40 167.2 117 65.8
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 1.4e-39 166.4 117 65.8
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 2.4e-39 165.6 117 65.8
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 3.1e-39 165.2 123 58.5
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 9.1e-39 163.7 98 72.4
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 6.1e-35 151.0 103 60.2
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.0e-33 146.0 107 57.9
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 3.3e-33 145.2 97 67.0
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 3.3e-33 145.2 105 60.0
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 1.7e-32 142.9 101 62.4
Zm00001eb369960 Zea mays HOM05D006897 ORTHO05D008825 8.2e-32 140.6 123 51.2
Zm00001eb151640 Zea mays HOM05D006897 ORTHO05D008825 2.4e-31 139.0 123 52.0
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 3.1e-31 138.7 117 59.8
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 5.9e-30 134.4 94 70.2
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 5.9e-30 134.4 101 59.4
Duzib106G0008 Durio zibethinus HOM05D006897 ORTHO05D008825 3.8e-29 131.7 77 77.9
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 1.9e-28 129.4 122 49.2
Rhsim04G0141800 Rhododendron simsii HOM05D006897 ORTHO05D008825 1.6e-27 126.3 89 62.9
SMO134G0180 Selaginella moellendorffii HOM05D006897 ORTHO05D008825 1.8e-26 122.9 116 49.1
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 2.3e-26 122.5 79 69.6
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 3.0e-26 122.1 105 55.2
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 5.2e-26 121.3 78 67.9
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 8.8e-26 120.6 126 45.2
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 1.1e-25 120.2 126 44.4
SalBow3G3382 Salvia bowleyana HOM05D006897 ORTHO05D008825 2.0e-25 119.4 132 45.5
SEGI_02421 Sequoiadendron giganteum HOM05D006897 ORTHO05D008825 4.4e-25 118.2 105 46.7
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 5.7e-25 117.9 79 68.4
Actinidia32484 Actinidia chinensis HOM05D006897 ORTHO05D008825 7.0e-23 110.9 65 70.8
Peaxi162Scf00658g00012 Petunia axillaris HOM05D006897 ORTHO05D008825 1.0e-18 97.1 116 49.1
arahy.Tifrunner.gnm1.ann1.Y93F21 Arachis hypogaea HOM05D006897 ORTHO05D008825 4.4e-17 91.7 118 45.8
HPP92_010165 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.0e-14 82.8 63 52.4
Nitab4.5_0003762g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 9.4e-12 73.9 53 62.3
Rhsim04G0141900 Rhododendron simsii HOM05D006897 ORTHO05D008825 1.8e-10 69.7 49 63.3
Actinidia31321 Actinidia chinensis HOM05D006897 ORTHO05D008825 3.0e-10 68.9 47 59.6
Sabra16G0184400 Salix brachista HOM05D004505 ORTHO05D005249 9.8e-09 63.9 40 65.0
Sabra04G0106300 Salix brachista HOM05D006897 ORTHO05D008825 1.3e-08 63.5 39 66.7


User provided reference genes

Program Settings