Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 1.1e-122 443.4 220 100.0
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 3.2e-111 405.2 220 90.5
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 2.7e-110 402.1 220 90.9
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 2.1e-102 375.9 221 87.3
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 2.4e-82 309.3 239 70.7
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 1.9e-79 299.7 221 72.9
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 5.5e-79 298.1 241 68.5
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 5.5e-79 298.1 239 68.2
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 1.5e-76 290.0 233 70.0
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 1.9e-76 289.7 221 70.1
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 4.3e-76 288.5 221 69.7
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 4.1e-74 282.0 220 66.4
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 9.0e-74 280.8 220 65.9
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 3.8e-72 275.4 223 65.0
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 6.5e-72 274.6 170 78.8
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 1.4e-71 273.5 174 77.6
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 1.4e-71 273.5 173 79.8
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 7.2e-71 271.2 226 65.0
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 9.3e-71 270.8 226 64.6
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 9.3e-71 270.8 241 63.5
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 1.2e-70 270.4 226 65.0
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 1.2e-70 270.4 196 70.9
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 1.6e-70 270.0 160 81.2
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 1.6e-70 270.0 227 67.0
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 1.6e-70 270.0 226 64.2
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 2.7e-70 269.2 175 77.7
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 2.7e-70 269.2 223 65.5
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 2.7e-70 269.2 210 67.1
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 2.3e-69 266.2 224 62.9
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 2.3e-69 266.2 226 63.7
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 3.9e-69 265.4 170 77.1
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 5.1e-69 265.0 168 79.2
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 6.7e-69 264.6 224 64.3
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 6.7e-69 264.6 226 63.3
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 1.1e-68 263.8 224 64.3
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 1.1e-68 263.8 206 68.0
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 1.5e-68 263.5 220 65.0
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 1.5e-68 263.5 146 85.6
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.5e-68 263.5 146 85.6
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 1.9e-68 263.1 174 73.6
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 2.5e-68 262.7 143 86.7
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 4.3e-68 261.9 142 85.9
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 5.7e-68 261.5 225 64.4
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 7.4e-68 261.2 216 64.4
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 9.7e-68 260.8 150 83.3
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 1.3e-67 260.4 142 85.2
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 2.2e-67 259.6 175 73.7
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 3.7e-67 258.8 196 66.3
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 8.2e-67 257.7 172 73.8
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 8.2e-67 257.7 169 75.7
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 8.2e-67 257.7 177 72.9
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 2.4e-66 256.1 158 81.0
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 3.1e-66 255.8 143 84.6
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 4.1e-66 255.4 152 80.9
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 4.1e-66 255.4 161 79.5
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 9.0e-66 254.2 188 68.6
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 9.0e-66 254.2 217 65.4
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 9.0e-66 254.2 158 80.4
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 2.0e-65 253.1 138 87.7
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 2.6e-65 252.7 143 81.8
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 3.4e-65 252.3 213 62.4
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 7.7e-65 251.1 172 73.8
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 1.0e-64 250.8 172 73.3
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 1.3e-64 250.4 201 67.2
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 2.2e-64 249.6 156 83.3
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 3.8e-64 248.8 220 61.8
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 5.0e-64 248.4 154 78.6
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 6.5e-64 248.1 186 67.7
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 1.1e-63 247.3 175 69.1
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 1.1e-63 247.3 175 69.1
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 1.1e-63 247.3 178 68.0
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 1.9e-63 246.5 204 61.8
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 4.2e-63 245.4 214 59.3
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.2e-62 243.8 142 81.7
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 2.1e-62 243.0 161 72.0
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 2.7e-62 242.7 188 63.3
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 2.7e-62 242.7 183 66.7
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 6.1e-62 241.5 183 65.6
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 7.9e-62 241.1 218 59.2
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 1.0e-61 240.7 143 78.3
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.0e-61 240.7 144 81.9
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 1.4e-61 240.4 189 65.6
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 1.4e-61 240.4 167 72.5
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 3.0e-61 239.2 216 61.6
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 6.7e-61 238.0 146 78.8
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 6.7e-61 238.0 150 74.0
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 8.8e-61 237.7 137 83.2
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 2.6e-60 236.1 166 71.1
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 5.7e-60 235.0 141 80.9
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 1.3e-59 233.8 134 83.6
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 9.1e-58 227.6 210 59.0
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 2.6e-57 226.1 129 84.5
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 3.4e-57 225.7 128 85.2
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 7.7e-57 224.6 160 66.2
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 3.2e-55 219.2 161 64.6
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 6.3e-51 204.9 139 69.8
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 7.5e-44 181.4 98 85.7
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 4.1e-42 175.6 90 90.0
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 2.2e-40 169.9 130 61.5
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 3.8e-40 169.1 144 55.6
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 1.0e-37 161.0 155 56.1
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 2.3e-37 159.8 218 45.9
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 3.4e-36 156.0 151 59.6
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 7.5e-36 154.8 136 58.8
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 3.7e-35 152.5 128 61.7
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 7.0e-34 148.3 75 90.7
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 7.7e-33 144.8 78 88.5
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 1.7e-32 143.7 158 54.4
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 5.2e-29 132.1 84 72.6
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 2.0e-28 130.2 72 86.1
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 7.0e-26 121.7 77 75.3
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 1.6e-25 120.6 68 82.4
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 2.8e-22 109.8 56 92.9


User provided reference genes

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