Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32796 Trifolium pratense HOM05D006636 ORTHO05D008266 3.5e-36 154.5 78 100.0
Psat6g136920 Pisum sativum HOM05D006636 ORTHO05D008266 7.7e-36 153.3 78 97.4
Medtr1g040905 Medicago truncatula HOM05D006636 ORTHO05D008266 9.4e-34 146.4 76 96.1
Psat4g201760 Pisum sativum HOM05D000716 ORTHO05D009512 9.4e-34 146.4 76 93.4
Psat4g152400 Pisum sativum HOM05D006636 ORTHO05D008266 3.6e-33 144.4 78 92.3
Ca_12203_v3 Cicer arietinum L. HOM05D006636 ORTHO05D008266 6.1e-33 143.7 78 92.3
Lj3g0021432 Lotus japonicus HOM05D006636 ORTHO05D008266 9.1e-29 129.8 76 82.9
Psat4g152480 Pisum sativum HOM05D000716 ORTHO05D009512 2.0e-28 128.6 66 95.5
Lalb_Chr03g0037601 Lupinus albus HOM05D006636 ORTHO05D008266 1.5e-26 122.5 78 79.5
arahy.Tifrunner.gnm1.ann1.G1PS4Z Arachis hypogaea HOM05D006636 ORTHO05D008266 7.2e-26 120.2 78 80.8
Glyma.02G001300 Glycine max HOM05D006636 ORTHO05D008266 1.4e-24 115.9 76 76.3
Gohir.D10G147800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 6.8e-24 113.6 76 75.0
Gorai.011G165000 Gossypium raimondii HOM05D006636 ORTHO05D008266 6.8e-24 113.6 76 75.0
Eucgr.H03183 Eucalyptus grandis HOM05D006636 ORTHO05D008266 1.2e-23 112.8 76 75.0
Phvul.006G006400 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 1.2e-23 112.8 76 72.4
Aqoxy5G00371 Aquilegia oxysepala HOM05D006636 ORTHO05D008266 1.5e-23 112.5 78 71.8
Phvul.010G060600 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 1.5e-23 112.5 75 73.3
QL06p014938 Quercus lobata HOM05D006636 ORTHO05D008266 1.5e-23 112.5 75 74.7
Gohir.A02G035000 Gossypium hirsutum HOM05D006636 ORTHO05D008266 2.0e-23 112.1 76 72.4
Gohir.D02G041800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 2.0e-23 112.1 76 72.4
Gorai.005G046200 Gossypium raimondii HOM05D006636 ORTHO05D008266 2.0e-23 112.1 76 72.4
CiPaw.02G118100 Carya illinoinensis HOM05D006636 ORTHO05D008266 7.5e-23 110.2 76 73.7
Gohir.A10G118900 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.3e-22 109.4 76 72.4
PGR142G1808 Punica granatum HOM05D006636 ORTHO05D008266 1.3e-22 109.4 76 71.1
Manes.03G170500 Manihot esculenta HOM05D006636 ORTHO05D008266 1.7e-22 109.0 75 74.7
CiPaw.01G192900 Carya illinoinensis HOM05D006636 ORTHO05D008266 2.2e-22 108.6 76 71.1
COL.COLO4_15761 Corchorus olitorius HOM05D006636 ORTHO05D008266 2.2e-22 108.6 76 68.4
CARHR220860 Cardamine hirsuta HOM05D006636 ORTHO05D008266 2.8e-22 108.2 78 69.2
AL7G41500 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 3.7e-22 107.8 78 67.9
Thecc.04G243200 Theobroma cacao HOM05D006636 ORTHO05D008266 4.9e-22 107.5 75 72.0
Aa31LG9G2720 Aethionema arabicum HOM05D006636 ORTHO05D008266 8.3e-22 106.7 75 68.0
Psat0s152g0080 Pisum sativum HOM05D006636 ORTHO05D008266 8.3e-22 106.7 57 91.2
Ah.03g134670 Amaranthus hybridus HOM05D006636 ORTHO05D008266 1.1e-21 106.3 78 67.9
Cc03_g04590 Coffea canephora HOM05D006636 ORTHO05D008266 1.1e-21 106.3 76 71.1
Cfa008404 Carpinus fangiana HOM05D006636 ORTHO05D008266 1.4e-21 105.9 76 67.1
Duzib212G0484 Durio zibethinus HOM05D006636 ORTHO05D008266 1.4e-21 105.9 76 68.4
Prupe.1G025800 Prunus persica HOM05D006636 ORTHO05D008266 1.4e-21 105.9 75 70.7
Ciclev10006361m.g Citrus clementina HOM05D006636 ORTHO05D008266 2.4e-21 105.1 75 68.0
Atru.chr4.2290 Acer truncatum HOM05D006636 ORTHO05D008266 3.1e-21 104.8 75 70.7
AL1G61120 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 3.1e-21 104.8 77 67.5
CARHR043050 Cardamine hirsuta HOM05D006636 ORTHO05D008266 3.1e-21 104.8 75 68.0
Manes.15G035100 Manihot esculenta HOM05D006636 ORTHO05D008266 3.1e-21 104.8 76 68.4
THA.LOC104808586 Tarenaya hassleriana HOM05D006636 ORTHO05D008266 3.1e-21 104.8 75 70.7
AT4G14615 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 4.1e-21 104.4 75 66.7
CSS0008233 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 4.1e-21 104.4 74 71.6
CSS0036965 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 4.1e-21 104.4 74 71.6
vmacro15399 Vaccinium macrocarpon HOM05D006636 ORTHO05D008266 4.1e-21 104.4 75 70.7
Thhalv10026714m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 5.4e-21 104.0 78 67.9
Sp7g12710 Schrenkiella parvula HOM05D006636 ORTHO05D008266 5.4e-21 104.0 78 67.9
Carub.0007s2759 Capsella rubella HOM05D006636 ORTHO05D008266 7.0e-21 103.6 75 66.7
AUR62005850 Chenopodium quinoa HOM05D006636 ORTHO05D008266 7.0e-21 103.6 76 64.5
Hund05854 Selenicereus undatus HOM05D006636 ORTHO05D008266 7.0e-21 103.6 76 64.5
Ah.02g129360 Amaranthus hybridus HOM05D006636 ORTHO05D008266 9.1e-21 103.2 76 67.1
Thhalv10011910m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 9.1e-21 103.2 75 66.7
AUR62032843 Chenopodium quinoa HOM05D006636 ORTHO05D008266 1.2e-20 102.8 76 64.5
Duzib151G1121 Durio zibethinus HOM05D006636 ORTHO05D008266 1.2e-20 102.8 75 66.7
FAN22G1829 Fragaria x ananassa HOM05D006636 ORTHO05D008266 1.2e-20 102.8 76 64.5
Nn3g19491 Nelumbo nucifera HOM05D006636 ORTHO05D008266 1.2e-20 102.8 75 68.0
Potri.008G160101 Populus trichocarpa HOM05D006636 ORTHO05D008266 1.2e-20 102.8 75 69.3
FAN12G3161 Fragaria x ananassa HOM05D006636 ORTHO05D008266 1.6e-20 102.4 75 65.3
RcHm_v2.0_Chr4g0388961 Rosa chinensis HOM05D006636 ORTHO05D008266 1.6e-20 102.4 76 61.8
Sed0018024 Sechium edule HOM05D006636 ORTHO05D008266 1.6e-20 102.4 75 72.0
ClCG06G006590 Citrullus lanatus HOM05D006636 ORTHO05D008266 2.0e-20 102.1 75 70.7
BcaB04g18245 Brassica carinata HOM05D006636 ORTHO05D008266 2.7e-20 101.7 75 66.7
A08p11260 Brassica napus HOM05D006636 ORTHO05D008266 2.7e-20 101.7 75 66.7
BraA08t33120Z Brassica rapa HOM05D006636 ORTHO05D008266 2.7e-20 101.7 75 66.7
Hund25206 Selenicereus undatus HOM05D006636 ORTHO05D008266 2.7e-20 101.7 76 63.2
Lsat_1_v5_gn_3_124880 Lactuca sativa HOM05D006636 ORTHO05D008266 3.5e-20 101.3 75 68.0
Potri.010G079100 Populus trichocarpa HOM05D006636 ORTHO05D008266 4.5e-20 100.9 75 68.0
CANSAT80G2460 Cannabis sativa HOM05D006636 ORTHO05D008266 5.9e-20 100.5 75 66.7
AT1G52825 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 7.7e-20 100.1 78 65.4
BcaC07g37832 Brassica carinata HOM05D006636 ORTHO05D008266 7.7e-20 100.1 75 65.3
BolC8t48218H Brassica oleracea HOM05D006636 ORTHO05D008266 7.7e-20 100.1 75 65.3
Migut.N00229 Erythranthe guttata HOM05D006636 ORTHO05D008266 7.7e-20 100.1 75 68.0
SalBow2G2841 Salvia bowleyana HOM05D006636 ORTHO05D008266 1.0e-19 99.8 75 65.3
Lsat_1_v5_gn_6_37261 Lactuca sativa HOM05D006636 ORTHO05D008266 1.3e-19 99.4 74 67.6
Dinv44607 Davidia involucrata HOM05D006636 ORTHO05D008266 1.7e-19 99.0 75 68.0
MSTRG.24709 Avicennia marina HOM05D006636 ORTHO05D008266 2.3e-19 98.6 76 68.4
CSS0035223 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 2.3e-19 98.6 75 65.3
Sc22g0003980 Simmondsia chinensis HOM05D006636 ORTHO05D008266 2.3e-19 98.6 76 63.2
Oeu029765.1 Olea europaea HOM05D006636 ORTHO05D008266 2.9e-19 98.2 75 68.0
EL10Ac6g13264 Beta vulgaris HOM05D006636 ORTHO05D008266 3.8e-19 97.8 75 64.0
ECA240G3921 Erigeron canadensis HOM05D006636 ORTHO05D008266 5.0e-19 97.4 75 66.7
MD16G1204700 Malus domestica HOM05D006636 ORTHO05D008266 6.6e-19 97.1 74 62.2
Peaxi162Scf00788g00311 Petunia axillaris HOM05D006636 ORTHO05D008266 1.9e-18 95.5 75 61.3
PSO210G2897 Papaver somniferum HOM05D006636 ORTHO05D008266 3.3e-18 94.7 78 61.5
MD13G1203300 Malus domestica HOM05D006636 ORTHO05D008266 4.2e-18 94.4 74 59.5
Zm00001eb116910 Zea mays HOM05D006636 ORTHO05D008266 4.2e-18 94.4 74 64.9
Nitab4.5_0001856g0080 Nicotiana tabacum HOM05D006636 ORTHO05D008266 5.5e-18 94.0 74 62.2
Oeu032618.1 Olea europaea HOM05D006636 ORTHO05D008266 5.5e-18 94.0 74 66.2
Nitab4.5_0001787g0030 Nicotiana tabacum HOM05D006636 ORTHO05D008266 9.5e-18 93.2 74 62.2
PSO832G4373 Papaver somniferum HOM05D006636 ORTHO05D008266 9.5e-18 93.2 75 62.7
CAN.G749.28 Capsicum annuum HOM05D006636 ORTHO05D008266 1.2e-17 92.8 74 62.2
Os07g0181800 Oryza sativa ssp. japonica HOM05D006636 ORTHO05D008266 2.1e-17 92.0 74 60.8
TWI53G1752 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 2.1e-17 92.0 75 61.3
TWI53G1902 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 2.1e-17 92.0 75 61.3
Solyc09g083070.3 Solanum lycopersicum HOM05D006636 ORTHO05D008266 2.8e-17 91.7 74 60.8
ATR0665G452 Amborella trichopoda HOM05D006636 ORTHO05D008266 8.0e-17 90.1 68 61.8
Sopen09g031950 Solanum pennellii HOM05D006636 ORTHO05D008266 8.0e-17 90.1 74 59.5
Carub.0001s4194 Capsella rubella HOM05D006636 ORTHO05D008266 1.0e-16 89.7 68 66.2
Dinv14071 Davidia involucrata HOM05D006636 ORTHO05D008266 1.4e-16 89.4 67 68.7
GSVIVG01018087001 Vitis vinifera HOM05D006636 ORTHO05D008266 2.3e-16 88.6 75 61.3
TWI73G0386 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 3.0e-16 88.2 75 58.7
HPP92_009619 Vanilla planifolia HOM05D006636 ORTHO05D008266 1.2e-15 86.3 73 57.5
Haze_11264 Corylus avellana HOM05D006636 ORTHO05D008266 2.0e-15 85.5 106 47.2
TAR365G0562 Trochodendron aralioides HOM05D006636 ORTHO05D008266 4.4e-15 84.3 75 56.0
Sabra10G0063800 Salix brachista HOM05D006636 ORTHO05D008266 1.3e-14 82.8 117 45.3
CDE07G1452 Ceratophyllum demersum HOM05D006636 ORTHO05D008266 1.8e-13 79.0 75 52.0
Pp3c4_21990 Physcomitrium patens HOM05D006636 ORTHO05D008266 5.9e-12 73.9 69 47.8
Mapoly0075s0084 Marchantia polymorpha HOM05D006636 ORTHO05D008266 6.2e-09 63.9 69 42.0
SalBow4G0852 Salvia bowleyana HOM05D006636 ORTHO05D008266 1.0e-08 63.2 43 72.1
AagrBONN_evm.TU.Sc2ySwM_117.3049 Anthoceros agrestis HOM05D006636 ORTHO05D008266 1.4e-08 62.8 63 47.6
unitig_26.g9474 Utricularia gibba HOM05D006636 ORTHO05D008266 2.3e-08 62.0 43 72.1
Actinidia40100 Actinidia chinensis HOM05D006636 ORTHO05D008266 8.9e-08 60.1 43 72.1
PGSC0003DMG400006103 Solanum tuberosum HOM05D006636 ORTHO05D008266 5.8e-07 57.4 47 59.6
FvH4_4g02000 Fragaria vesca HOM05D006636 ORTHO05D008266 7.5e-07 57.0 34 73.5
HanXRQChr13g0424641 Helianthus annuus HOM05D006636 ORTHO05D008266 9.8e-07 56.6 48 58.3
SHI00567 Sapria himalayana HOM05D006636 ORTHO05D008266 2.2e-06 55.5 36 75.0


User provided reference genes

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