Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32773 Trifolium pratense HOM05D008730 ORTHO05D010922 5.7e-99 364.4 201 100.0
TPR.G8135 Trifolium pratense HOM05D008730 ORTHO05D010922 6.5e-87 324.3 203 92.1
Medtr7g067500 Medicago truncatula HOM05D008730 ORTHO05D010922 2.7e-77 292.4 202 82.7
Psat3g130400 Pisum sativum HOM05D008730 ORTHO05D010922 8.0e-77 290.8 201 74.6
Glyma.18G198600 Glycine max HOM05D008730 ORTHO05D010922 2.2e-66 256.1 199 73.9
VMungo1383G2265 Vigna mungo HOM05D008730 ORTHO05D010922 4.5e-64 248.4 199 65.3
Lj1g0001006 Lotus japonicus HOM05D008730 ORTHO05D010922 5.9e-64 248.1 201 71.1
Phvul.008G105800 Phaseolus vulgaris HOM05D008730 ORTHO05D010922 5.9e-64 248.1 200 64.5
Glyma.07G147500 Glycine max HOM05D008730 ORTHO05D010922 2.8e-61 239.2 201 66.7
Thecc.05G019000 Theobroma cacao HOM05D008730 ORTHO05D010922 6.4e-42 174.9 200 56.0
Prupe.6G274600 Prunus persica HOM05D008730 ORTHO05D010922 7.8e-40 167.9 202 56.9
CiPaw.10G155800 Carya illinoinensis HOM05D008730 ORTHO05D010922 5.1e-39 165.2 199 56.8
RcHm_v2.0_Chr3g0463501 Rosa chinensis HOM05D008730 ORTHO05D010922 2.3e-36 156.4 187 56.1
FAN09G0720 Fragaria x ananassa HOM05D008730 ORTHO05D010922 4.0e-36 155.6 187 52.9
Haze_20977 Corylus avellana HOM05D008730 ORTHO05D010922 2.6e-35 152.9 185 55.1
Hma1.2p1_0362F.1_g136070 Hydrangea macrophylla HOM05D008730 ORTHO05D010922 4.4e-35 152.1 209 49.3
MD12G1164100 Malus domestica HOM05D008730 ORTHO05D010922 7.5e-35 151.4 197 55.8
FvH4_6g11721 Fragaria vesca HOM05D008730 ORTHO05D010922 1.3e-34 150.6 201 53.7
Cfa017229 Carpinus fangiana HOM05D008730 ORTHO05D010922 2.9e-34 149.4 185 55.7
Aqoxy2G00930 Aquilegia oxysepala HOM05D008730 ORTHO05D010922 3.7e-34 149.1 202 50.0
FAN05G3712 Fragaria x ananassa HOM05D008730 ORTHO05D010922 4.9e-34 148.7 201 52.7
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 3.2e-33 146.0 142 52.8
FAN14G1945 Fragaria x ananassa HOM05D008730 ORTHO05D010922 3.2e-33 146.0 142 52.8
Sed0022931 Sechium edule HOM05D008730 ORTHO05D010922 3.2e-33 146.0 194 49.5
ClCG04G007080 Citrullus lanatus HOM05D008730 ORTHO05D010922 4.1e-33 145.6 202 51.0
Ciclev10013688m.g Citrus clementina HOM05D008730 ORTHO05D010922 7.1e-33 144.8 207 53.6
Gohir.D09G159900 Gossypium hirsutum HOM05D008730 ORTHO05D010922 4.6e-32 142.1 197 52.8
Gorai.006G181500 Gossypium raimondii HOM05D008730 ORTHO05D010922 4.6e-32 142.1 197 52.8
Atru.chr8.2218 Acer truncatum HOM05D008730 ORTHO05D010922 1.3e-31 140.6 206 55.3
Manes.08G090500 Manihot esculenta HOM05D008730 ORTHO05D010922 1.3e-31 140.6 203 48.8
DCAR_018712 Daucus carota HOM05D008730 ORTHO05D010922 1.7e-31 140.2 195 49.7
Gohir.A09G164300 Gossypium hirsutum HOM05D008730 ORTHO05D010922 2.3e-31 139.8 202 51.5
Potri.006G098800 Populus trichocarpa HOM05D008730 ORTHO05D010922 6.6e-31 138.3 157 51.6
MELO3C003244.2 Cucumis melo HOM05D008730 ORTHO05D010922 1.9e-30 136.7 197 46.7
CsaV3_4G026170 Cucumis sativus L. HOM05D008730 ORTHO05D010922 6.4e-26 121.7 197 45.2
Potri.016G114100 Populus trichocarpa HOM05D008730 ORTHO05D010922 3.5e-24 115.9 131 52.7
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 5.6e-22 108.6 129 59.7
Lsat_1_v5_gn_9_33720 Lactuca sativa HOM05D008730 ORTHO05D010922 4.7e-21 105.5 208 41.8
Migut.J00187 Erythranthe guttata HOM05D008730 ORTHO05D010922 5.3e-20 102.1 154 42.2
ATR0618G247 Amborella trichopoda HOM05D008730 ORTHO05D010922 5.4e-17 92.0 196 40.8
Cpa.g.sc163.12 Carica papaya HOM05D008730 ORTHO05D010922 1.5e-14 84.0 172 36.0
MD04G1149700 Malus domestica HOM05D008730 ORTHO05D010922 5.3e-12 75.5 104 56.7
Cfa017227 Carpinus fangiana HOM05D008730 ORTHO05D010922 1.3e-10 70.9 95 40.0
MBI14_g41802_MAGBIO Magnolia biondii HOM05D008730 ORTHO05D010922 2.5e-06 56.6 76 46.1


User provided reference genes

Program Settings