Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32595 Trifolium pratense HOM05D004965 ORTHO05D004401 1.0e-66 256.5 126 100.0
Psat1g077560 Pisum sativum HOM05D004965 ORTHO05D004401 7.5e-49 197.2 127 81.1
Lj2g0009068 Lotus japonicus HOM05D004965 ORTHO05D004401 3.0e-37 158.7 127 66.9
Phvul.004G023800 Phaseolus vulgaris HOM05D004965 ORTHO05D004401 2.1e-30 136.0 114 65.8
Glyma.13G067000 Glycine max HOM05D004965 ORTHO05D004401 2.1e-27 125.9 103 68.9
Glyma.19G017400 Glycine max HOM05D004965 ORTHO05D004401 1.8e-26 122.9 103 67.0
Medtr6g009390 Medicago truncatula HOM05D004965 ORTHO05D004401 2.0e-25 119.4 71 87.3
Lalb_Chr06g0176581 Lupinus albus HOM05D004965 ORTHO05D004401 9.6e-20 100.5 96 61.5
Lalb_Chr21g0319141 Lupinus albus HOM05D004965 ORTHO05D004401 1.3e-19 100.1 93 62.4
arahy.Tifrunner.gnm1.ann1.6A0KRF Arachis hypogaea HOM05D004965 ORTHO05D004401 1.8e-18 96.3 100 57.0
arahy.Tifrunner.gnm1.ann1.E1G8VG Arachis hypogaea HOM05D004965 ORTHO05D004401 1.8e-18 96.3 100 57.0
MD09G1042500 Malus domestica HOM05D004965 ORTHO05D004401 7.9e-14 80.9 93 50.5
Actinidia06052 Actinidia chinensis HOM05D004965 ORTHO05D004401 3.9e-13 78.6 88 48.9
Prupe.3G275200 Prunus persica HOM05D004965 ORTHO05D004401 3.9e-13 78.6 89 48.3
TAR369G0013 Trochodendron aralioides HOM05D004965 ORTHO05D004401 2.5e-12 75.9 104 45.2
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 3.3e-12 75.5 96 43.8
QL02p079418 Quercus lobata HOM05D004965 ORTHO05D004401 4.3e-12 75.1 92 45.7
Haze_14606 Corylus avellana HOM05D004965 ORTHO05D004401 9.6e-12 73.9 93 46.2
Dinv33690 Davidia involucrata HOM05D004965 ORTHO05D004401 9.6e-12 73.9 94 50.0
Cpa.g.sc14.63 Carica papaya HOM05D004965 ORTHO05D004401 2.8e-11 72.4 100 44.0
CsaV3_5G037710 Cucumis sativus L. HOM05D004965 ORTHO05D004401 3.6e-11 72.0 93 44.1
RcHm_v2.0_Chr2g0169701 Rosa chinensis HOM05D004965 ORTHO05D004401 4.8e-11 71.6 91 49.5
Thecc.04G069500 Theobroma cacao HOM05D004965 ORTHO05D004401 4.8e-11 71.6 101 41.6
Ciclev10013642m.g Citrus clementina HOM05D004965 ORTHO05D004401 6.2e-11 71.2 95 44.2
Potri.017G074600 Populus trichocarpa HOM05D004965 ORTHO05D004401 6.2e-11 71.2 101 42.6
Atru.chr8.2466 Acer truncatum HOM05D004965 ORTHO05D004401 1.1e-10 70.5 105 41.0
FAN02G2636 Fragaria x ananassa HOM05D004965 ORTHO05D004401 2.4e-10 69.3 95 47.4
FAN14G2761 Fragaria x ananassa HOM05D004965 ORTHO05D004401 2.4e-10 69.3 95 47.4
FvH4_6g49680 Fragaria vesca HOM05D004965 ORTHO05D004401 4.0e-10 68.6 95 47.4
CiPaw.04G021200 Carya illinoinensis HOM05D004965 ORTHO05D004401 6.9e-10 67.8 94 40.4
DCAR_025362 Daucus carota HOM05D004965 ORTHO05D004401 1.5e-09 66.6 89 41.6
FAN09G1906 Fragaria x ananassa HOM05D004965 ORTHO05D004401 2.0e-09 66.2 95 46.3
Manes.15G177900 Manihot esculenta HOM05D004965 ORTHO05D004401 2.0e-09 66.2 101 40.6
CSS0011493 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 2.6e-09 65.9 86 44.2
FAN05G5108 Fragaria x ananassa HOM05D004965 ORTHO05D004401 3.4e-09 65.5 95 46.3
Dinv24933 Davidia involucrata HOM05D004965 ORTHO05D004401 4.5e-09 65.1 98 40.8
Sed0027722 Sechium edule HOM05D004965 ORTHO05D004401 5.8e-09 64.7 96 41.7
TAR629G2889 Trochodendron aralioides HOM05D004965 ORTHO05D004401 5.8e-09 64.7 102 44.1
DCAR_006716 Daucus carota HOM05D004965 ORTHO05D004401 2.2e-08 62.8 47 63.8
TAR374G1442 Trochodendron aralioides HOM05D004965 ORTHO05D004401 2.2e-08 62.8 103 38.8
CANSAT64G1053 Cannabis sativa HOM05D004965 ORTHO05D004401 2.9e-08 62.4 109 39.4
MD17G1044000 Malus domestica HOM05D004965 ORTHO05D004401 3.8e-08 62.0 81 45.7
Rhsim10G0029300 Rhododendron simsii HOM05D004965 ORTHO05D004401 6.4e-08 61.2 81 42.0
TWI36G1294 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 6.4e-08 61.2 104 38.5
Thecc.02G237300 Theobroma cacao HOM05D004965 ORTHO05D004401 8.4e-08 60.8 98 35.7
TAR622G1192 Trochodendron aralioides HOM05D004965 ORTHO05D004401 8.4e-08 60.8 82 39.0
vmacro05780 Vaccinium macrocarpon HOM05D004965 ORTHO05D004401 8.4e-08 60.8 81 43.2
CiPaw.03G032200 Carya illinoinensis HOM05D004965 ORTHO05D004401 1.1e-07 60.5 95 40.0
Duzib187G0871 Durio zibethinus HOM05D004965 ORTHO05D004401 1.9e-07 59.7 56 53.6
TWI56G0241 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 2.4e-07 59.3 102 39.2
Gohir.D07G223500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 3.2e-07 58.9 95 38.9
Nn4g22977 Nelumbo nucifera HOM05D004965 ORTHO05D004401 3.2e-07 58.9 64 48.4
Sabra17G0067000 Salix brachista HOM05D004965 ORTHO05D004401 3.2e-07 58.9 87 41.4
Gorai.001G257800 Gossypium raimondii HOM05D004965 ORTHO05D004401 4.2e-07 58.5 95 37.9
Dinv31145 Davidia involucrata HOM05D004965 ORTHO05D004401 5.5e-07 58.2 97 40.2
GSVIVG01020127001 Vitis vinifera HOM05D004965 ORTHO05D004401 5.5e-07 58.2 94 39.4
Cfa007493 Carpinus fangiana HOM05D004965 ORTHO05D004401 7.1e-07 57.8 85 40.0
Cc07_g02840 Coffea canephora HOM05D004965 ORTHO05D004401 7.1e-07 57.8 79 35.4
Cc11_g13890 Coffea canephora HOM05D004965 ORTHO05D004401 7.1e-07 57.8 90 38.9
PGR083G1219 Punica granatum HOM05D004965 ORTHO05D004401 7.1e-07 57.8 101 36.6
EL10Ac6g13083 Beta vulgaris HOM05D004965 ORTHO05D004401 9.3e-07 57.4 105 34.3
Hund13292 Selenicereus undatus HOM05D004965 ORTHO05D004401 9.3e-07 57.4 50 52.0
Nn3g17067 Nelumbo nucifera HOM05D004965 ORTHO05D004401 1.2e-06 57.0 105 39.0
SalBow1G8504 Salvia bowleyana HOM05D004965 ORTHO05D004401 1.2e-06 57.0 84 42.9
ECA246G4714 Erigeron canadensis HOM05D004965 ORTHO05D004401 2.1e-06 56.2 93 41.9
Prupe.1G263100 Prunus persica HOM05D004965 ORTHO05D004401 2.1e-06 56.2 95 34.7
Gohir.A07G216700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 2.7e-06 55.8 95 37.9
Solyc05g006610.4 Solanum lycopersicum HOM05D004965 ORTHO05D004401 2.7e-06 55.8 55 56.4
Sopen05g002550 Solanum pennellii HOM05D004965 ORTHO05D004401 2.7e-06 55.8 55 56.4
Aqoxy3G03187 Aquilegia oxysepala HOM05D004965 ORTHO05D004401 3.5e-06 55.5 102 43.1
Thhalv10028314m.g Eutrema salsugineum HOM05D009946 ORTHO05D004401 3.5e-06 55.5 88 39.8
MELO3C026507.2 Cucumis melo HOM05D004965 ORTHO05D004401 4.6e-06 55.1 91 39.6
MBI04_g09739_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 4.6e-06 55.1 50 52.0
Actinidia12285 Actinidia chinensis HOM05D004965 ORTHO05D004401 6.0e-06 54.7 121 33.1
Lsat_1_v5_gn_0_35980 Lactuca sativa HOM05D004965 ORTHO05D004401 6.0e-06 54.7 93 38.7
PGSC0003DMG400004191 Solanum tuberosum HOM05D004965 ORTHO05D004401 6.0e-06 54.7 95 38.9
ClCG08G009090 Citrullus lanatus HOM05D004965 ORTHO05D004401 7.9e-06 54.3 93 38.7
DCAR_026576 Daucus carota HOM05D004965 ORTHO05D004401 7.9e-06 54.3 85 40.0


User provided reference genes

Program Settings