Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32507 Trifolium pratense HOM05D000005 ORTHO05D000012 9.5e-74 280.0 136 100.0
Medtr8g020290 Medicago truncatula HOM05D000005 ORTHO05D000012 1.6e-44 183.0 115 79.1
Medtr8g019730 Medicago truncatula HOM05D000005 ORTHO05D000012 2.1e-44 182.6 118 79.7
Medtr8g020360 Medicago truncatula HOM05D000005 ORTHO05D000012 1.5e-42 176.4 115 78.3
Ca_05008_v3 Cicer arietinum L. HOM05D000005 ORTHO05D000012 1.8e-40 169.5 115 74.8
Ca_05007_v3 Cicer arietinum L. HOM05D000005 ORTHO05D000012 1.3e-38 163.3 113 73.5
Medtr8g020350 Medicago truncatula HOM05D000005 ORTHO05D000012 1.7e-38 162.9 126 68.3
TPR.G32497 Trifolium pratense HOM05D000005 ORTHO05D000012 5.5e-37 157.9 107 78.5
Glyma.07G037000 Glycine max HOM05D000005 ORTHO05D000012 1.2e-20 103.6 101 51.5
Psat4g182840 Pisum sativum HOM05D000005 ORTHO05D000012 1.9e-18 96.3 99 55.6
Glyma.16G006400 Glycine max HOM05D000005 ORTHO05D000012 2.5e-18 95.9 86 58.1
TPR.G32475 Trifolium pratense HOM05D000005 ORTHO05D000012 2.2e-17 92.8 124 42.7
Phvul.010G132000 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 2.8e-17 92.4 98 48.0
VMungo0331G0588 Vigna mungo HOM05D000005 ORTHO05D000012 1.4e-16 90.1 101 45.5
Phvul.010G131950 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 1.8e-16 89.7 104 46.2
Phvul.010G132333 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 1.8e-16 89.7 104 46.2
Medtr8g020300 Medicago truncatula HOM05D000005 ORTHO05D000012 4.1e-16 88.6 98 54.1
TPR.G34320 Trifolium pratense HOM05D000005 ORTHO05D000012 6.9e-16 87.8 111 45.0
VMungo0331G0821 Vigna mungo HOM05D000005 ORTHO05D000012 5.9e-15 84.7 96 50.0
Phvul.010G131650 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 5.0e-14 81.6 110 41.8
TPR.G18459 Trifolium pratense HOM05D000005 ORTHO05D000012 2.5e-13 79.3 106 45.3
arahy.Tifrunner.gnm1.ann1.P0A6GX Arachis hypogaea HOM05D000005 ORTHO05D000012 4.2e-13 78.6 92 45.7
arahy.Tifrunner.gnm1.ann1.HCJ3IA Arachis hypogaea HOM05D000005 ORTHO05D000012 2.1e-12 76.3 110 40.9
arahy.Tifrunner.gnm1.ann1.3SI7RL Arachis hypogaea HOM05D000005 ORTHO05D000012 6.1e-12 74.7 110 40.0
TPR.G32496 Trifolium pratense HOM05D000005 ORTHO05D000012 7.9e-12 74.3 99 44.4
TPR.G34964 Trifolium pratense HOM05D000005 ORTHO05D000012 1.8e-11 73.2 103 41.7
arahy.Tifrunner.gnm1.ann1.N0928S Arachis hypogaea HOM05D000005 ORTHO05D000012 3.9e-11 72.0 102 41.2
TPR.G32512 Trifolium pratense HOM05D000005 ORTHO05D000012 6.7e-11 71.2 88 47.7
Medtr4g014340 Medicago truncatula HOM05D000005 ORTHO05D000012 2.6e-10 69.3 96 38.5
Medtr4g014280 Medicago truncatula HOM05D000005 ORTHO05D000012 4.8e-09 65.1 92 38.0
arahy.Tifrunner.gnm1.ann1.HII4GC Arachis hypogaea HOM05D000005 ORTHO05D000012 1.1e-08 63.9 95 37.9
Medtr4g014240 Medicago truncatula HOM05D000005 ORTHO05D000012 1.4e-08 63.5 105 37.1
arahy.Tifrunner.gnm1.ann1.QP8IW7 Arachis hypogaea HOM05D000005 ORTHO05D000012 1.8e-08 63.2 95 37.9
Medtr4g014310 Medicago truncatula HOM05D000005 ORTHO05D000012 3.1e-08 62.4 91 36.3
TPR.G11382 Trifolium pratense HOM05D000005 ORTHO05D000012 7.0e-08 61.2 89 37.1
VMungo1309G1950 Vigna mungo HOM05D000005 ORTHO05D000012 1.5e-07 60.1 93 37.6
Medtr4g013370 Medicago truncatula HOM05D000005 ORTHO05D000012 2.6e-07 59.3 87 33.3
Glyma.15G152200 Glycine max HOM05D000005 ORTHO05D000012 3.4e-07 58.9 92 34.8
Glyma.15G152400 Glycine max HOM05D000005 ORTHO05D000012 3.4e-07 58.9 92 34.8
Lj3g0016799 Lotus japonicus HOM05D000005 ORTHO05D000012 4.5e-07 58.5 110 31.8
arahy.Tifrunner.gnm1.ann1.ZVPY4M Arachis hypogaea HOM05D000005 ORTHO05D000012 5.9e-07 58.2 75 42.7
Lj1g0016561 Lotus japonicus HOM05D000005 ORTHO05D000012 1.0e-06 57.4 103 34.0
Medtr4g014320 Medicago truncatula HOM05D000005 ORTHO05D000012 2.2e-06 56.2 107 34.6
Glyma.01G125300 Glycine max HOM05D000005 ORTHO05D000012 2.9e-06 55.8 89 38.2
Glyma.01G125400 Glycine max HOM05D000005 ORTHO05D000012 3.8e-06 55.5 98 31.6
Phvul.009G237600 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 3.8e-06 55.5 105 36.2
Glyma.15G160900 Glycine max HOM05D000005 ORTHO05D000012 8.5e-06 54.3 87 35.6


User provided reference genes

Program Settings