Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 7.5e-203 710.3 358 100.0
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 1.5e-187 659.4 358 91.9
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 2.2e-186 655.6 358 92.2
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 2.7e-184 648.7 359 90.8
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 2.5e-174 615.5 359 84.4
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 4.7e-173 611.3 360 84.7
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 1.5e-171 606.3 360 85.0
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 4.4e-171 604.7 360 84.2
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 5.6e-166 587.8 369 81.6
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 1.1e-164 583.6 410 73.7
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 9.0e-156 553.9 358 76.0
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 7.6e-155 550.8 358 74.3
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 7.6e-155 550.8 358 74.3
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 1.3e-154 550.1 358 74.3
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.7e-154 549.7 358 74.6
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 1.4e-153 546.6 358 74.9
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 1.9e-153 546.2 359 75.2
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 2.4e-153 545.8 358 74.6
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 3.9e-151 538.5 358 72.9
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 1.9e-150 536.2 359 72.1
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 3.3e-150 535.4 359 72.1
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 4.3e-150 535.0 359 71.9
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 2.1e-149 532.7 358 74.0
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 2.8e-149 532.3 358 74.0
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 1.1e-148 530.4 358 73.7
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 2.4e-148 529.3 358 72.3
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 1.2e-147 526.9 358 72.1
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 1.2e-147 526.9 358 72.1
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 7.6e-147 524.2 360 71.9
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 3.8e-146 521.9 358 70.9
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 2.1e-144 516.2 359 70.8
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 4.6e-144 515.0 346 74.6
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 1.8e-143 513.1 358 71.2
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 3.9e-143 511.9 359 70.2
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 1.1e-142 510.4 359 70.8
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 1.5e-142 510.0 358 69.6
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 2.5e-142 509.2 348 70.7
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 2.5e-142 509.2 360 69.7
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 4.3e-142 508.4 359 69.9
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 5.7e-142 508.1 359 69.4
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 7.4e-142 507.7 359 69.6
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 4.8e-141 505.0 348 70.4
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 4.8e-141 505.0 362 70.7
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 6.3e-141 504.6 378 68.0
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 1.4e-140 503.4 360 70.3
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 1.4e-140 503.4 360 70.3
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 1.8e-140 503.1 357 69.5
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 6.9e-140 501.1 360 69.7
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 1.2e-139 500.4 378 68.0
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 1.5e-139 500.0 357 67.8
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 2.0e-139 499.6 359 70.5
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 3.4e-139 498.8 360 70.3
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 5.9e-139 498.0 360 70.6
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 3.8e-138 495.4 360 69.4
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 8.5e-138 494.2 360 69.2
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 2.5e-137 492.7 359 67.7
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 1.0e-135 487.3 323 71.8
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 3.9e-135 485.3 359 65.5
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 6.7e-135 484.6 404 62.4
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 1.1e-132 477.2 327 71.9
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 3.1e-132 475.7 355 64.8
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 7.7e-131 471.1 334 66.5
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 2.2e-130 469.5 359 66.0
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 1.0e-127 460.7 357 66.7
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 2.3e-127 459.5 362 62.7
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 1.3e-125 453.8 356 64.9
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 4.1e-124 448.7 368 62.2
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 6.9e-124 448.0 343 61.2
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 2.6e-123 446.0 396 62.6
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 5.9e-123 444.9 340 61.8
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 1.3e-122 443.7 359 60.2
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 3.9e-119 432.2 293 72.0
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 4.8e-117 425.2 377 59.4
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 6.3e-117 424.9 343 58.6
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 2.9e-114 416.0 367 63.2
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 1.1e-113 414.1 341 60.7
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 4.2e-113 412.1 322 65.8
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 4.7e-112 408.7 322 66.1
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 2.2e-109 399.8 346 59.0
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 8.2e-109 397.9 428 51.9
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 1.9e-105 386.7 301 62.5
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 9.8e-102 374.4 383 54.0
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 4.1e-100 369.0 252 72.2
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 5.0e-98 362.1 376 51.6
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 1.2e-96 357.5 364 54.7
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 1.5e-94 350.5 385 53.5
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 1.6e-91 340.5 260 64.6
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 9.8e-86 321.2 347 53.0
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 3.2e-84 316.2 343 47.5
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 5.4e-84 315.5 320 47.2
Zm00001eb156340 Zea mays HOM05D006225 ORTHO05D007676 1.5e-78 297.4 246 58.1
RcHm_v2.0_Chr1g0351931 Rosa chinensis HOM05D006225 ORTHO05D007676 9.5e-73 278.1 166 78.9
Actinidia15885 Actinidia chinensis HOM05D006225 ORTHO05D007676 5.4e-68 262.3 167 74.3
FAN06G4019 Fragaria x ananassa HOM05D006225 ORTHO05D007676 5.4e-68 262.3 175 73.7
Peaxi162Scf00394g00621 Petunia axillaris HOM05D006225 ORTHO05D007676 5.4e-68 262.3 186 71.5
RcHm_v2.0_Chr1g0351941 Rosa chinensis HOM05D006225 ORTHO05D007676 7.1e-68 261.9 175 75.4
Cc07_g08800 Coffea canephora HOM05D006225 ORTHO05D007676 1.7e-66 257.3 171 71.9
Cc07_g08810 Coffea canephora HOM05D006225 ORTHO05D007676 8.1e-64 248.4 175 72.6
FAN10G1204 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.5e-62 244.2 175 69.1
Eucgr.H04974 Eucalyptus grandis HOM05D006225 ORTHO05D007676 9.9e-62 241.5 239 52.3
Solyc02g086060.4 Solanum lycopersicum HOM05D006225 ORTHO05D007676 1.3e-61 241.1 179 69.8
Hund13715 Selenicereus undatus HOM05D006225 ORTHO05D007676 3.5e-59 233.0 175 62.9
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 3.0e-58 229.9 307 41.0
CDE02G4721 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 4.9e-53 212.6 172 61.6
Solyc02g086070.2 Solanum lycopersicum HOM05D006225 ORTHO05D007676 8.4e-53 211.8 141 73.0
Hma1.2p1_0136F.1_g062270 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 3.3e-49 199.9 123 70.7
Peaxi162Scf00394g00622 Petunia axillaris HOM05D006225 ORTHO05D007676 3.1e-47 193.4 108 81.5
arahy.Tifrunner.gnm1.ann1.8IQW6A Arachis hypogaea HOM05D006225 ORTHO05D007676 1.2e-46 191.4 117 78.6
arahy.Tifrunner.gnm1.ann1.RE0KC5 Arachis hypogaea HOM05D006225 ORTHO05D007676 1.9e-44 184.1 139 69.8
arahy.Tifrunner.gnm1.ann1.PRIQ1K Arachis hypogaea HOM05D006225 ORTHO05D007676 5.4e-44 182.6 131 71.8
Oeu008428.1 Olea europaea HOM05D006225 ORTHO05D007676 1.8e-42 177.6 212 48.6
MD07G1125200 Malus domestica HOM05D006225 ORTHO05D007676 3.3e-41 173.3 111 72.1
arahy.Tifrunner.gnm1.ann1.QBFC9G Arachis hypogaea HOM05D006225 ORTHO05D007676 3.4e-38 163.3 126 66.7
arahy.Tifrunner.gnm1.ann1.QHM34M Arachis hypogaea HOM05D006225 ORTHO05D007676 9.3e-36 155.2 144 59.7
arahy.Tifrunner.gnm1.ann1.A87HRQ Arachis hypogaea HOM05D006225 ORTHO05D007676 7.9e-35 152.1 104 75.0
SHI22412 Sapria himalayana HOM05D006225 ORTHO05D007676 8.7e-34 148.7 94 72.3
CDE02G0503 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 3.3e-33 146.7 111 62.2
HanXRQChr13g0396101 Helianthus annuus HOM05D006225 ORTHO05D007676 3.3e-33 146.7 91 75.8
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 3.3e-33 146.7 377 27.3
arahy.Tifrunner.gnm1.ann1.FD2CEU Arachis hypogaea HOM05D006225 ORTHO05D007676 1.2e-30 138.3 104 70.2
arahy.Tifrunner.gnm1.ann1.5T0UVN Arachis hypogaea HOM05D006225 ORTHO05D007676 2.5e-28 130.6 75 82.7
Actinidia36322 Actinidia chinensis HOM05D006225 ORTHO05D007676 1.3e-24 118.2 82 72.0
CBR_g8910 Chara braunii HOM05D006555 ORTHO05D008376 1.4e-23 114.8 221 33.9
CBR_g65298 Chara braunii HOM05D006225 ORTHO05D007676 1.0e-21 108.6 121 42.1
arahy.Tifrunner.gnm1.ann1.GQQ1MZ Arachis hypogaea HOM05D006225 ORTHO05D007676 1.9e-20 104.4 75 72.0
MD07G1125400 Malus domestica HOM05D006225 ORTHO05D007676 3.2e-20 103.6 111 52.3
Eucgr.L03301 Eucalyptus grandis HOM05D006225 ORTHO05D007676 5.5e-20 102.8 79 67.1
Hma1.2p1_0239F.1_g099920 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 9.4e-20 102.1 63 73.0
arahy.Tifrunner.gnm1.ann1.LDE0EK Arachis hypogaea HOM05D006555 ORTHO05D008376 1.4e-12 78.2 277 22.0
Duzib187G0608 Durio zibethinus HOM05D006555 ORTHO05D008376 2.5e-12 77.4 314 23.2
Lsat_1_v5_gn_0_24261 Lactuca sativa HOM05D006555 ORTHO05D008376 2.1e-11 74.3 309 21.7
HanXRQChr15g0474321 Helianthus annuus HOM05D006555 ORTHO05D008376 1.8e-10 71.2 319 20.7
Thecc.04G067100 Theobroma cacao HOM05D006555 ORTHO05D008376 3.0e-10 70.5 315 23.2
Duzib147G0944 Durio zibethinus HOM05D006555 ORTHO05D008376 8.8e-10 68.9 305 23.6
Manes.17G119457 Manihot esculenta HOM05D006555 ORTHO05D008376 9.7e-09 65.5 256 22.7
Sabra05G0090500 Salix brachista HOM05D006555 ORTHO05D008376 1.7e-08 64.7 240 23.8
SEGI_26593 Sequoiadendron giganteum HOM05D006555 ORTHO05D008376 1.7e-08 64.7 147 27.9
Potri.005G110300 Populus trichocarpa HOM05D006555 ORTHO05D008376 6.3e-08 62.8 327 22.6
Glyma.08G102000 Glycine max HOM05D006555 ORTHO05D008376 2.4e-07 60.8 311 22.2
ECA246G4860 Erigeron canadensis HOM05D006555 ORTHO05D008376 3.1e-07 60.5 228 21.5
BcaC04g24063 Brassica carinata HOM05D006225 ORTHO05D007676 4.1e-07 60.1 46 58.7
VMungo0251G3141 Vigna mungo HOM05D006555 ORTHO05D008376 9.1e-07 58.9 249 22.1
Phvul.002G176300 Phaseolus vulgaris HOM05D006555 ORTHO05D008376 1.5e-06 58.2 244 20.1


User provided reference genes

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