Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32464 Trifolium pratense HOM05D007017 ORTHO05D008784 1.2e-56 223.0 105 100.0
TPR.G16968 Trifolium pratense HOM05D007017 ORTHO05D008784 6.6e-39 164.1 78 97.4
TPR.G32456 Trifolium pratense HOM05D007017 ORTHO05D008784 8.9e-20 100.5 47 97.9
Ca_27453_v3 Cicer arietinum L. HOM05D007017 ORTHO05D008784 2.0e-19 99.4 47 95.7
Medtr0024s0260 Medicago truncatula HOM05D007017 ORTHO05D008784 2.6e-19 99.0 47 95.7
Lalb_Chr02g0158301 Lupinus albus HOM05D007017 ORTHO05D008784 1.3e-18 96.7 46 95.7
Psat1g080240 Pisum sativum HOM05D007017 ORTHO05D008784 1.7e-18 96.3 47 91.5
Migut.H00202 Erythranthe guttata HOM05D007017 ORTHO05D008784 3.7e-18 95.1 47 87.2
Lj2g0026211 Lotus japonicus HOM05D007017 ORTHO05D008784 3.7e-18 95.1 47 87.2
arahy.Tifrunner.gnm1.ann1.Q5MPVN Arachis hypogaea HOM05D007017 ORTHO05D008784 6.4e-18 94.4 47 89.4
arahy.Tifrunner.gnm1.ann1.SDSH2P Arachis hypogaea HOM05D007017 ORTHO05D008784 6.4e-18 94.4 47 89.4
Cc07_g08970 Coffea canephora HOM05D007017 ORTHO05D008784 8.3e-18 94.0 47 89.4
CiPaw.03G060000 Carya illinoinensis HOM05D007017 ORTHO05D008784 1.1e-17 93.6 47 85.1
Thecc.04G137100 Theobroma cacao HOM05D007017 ORTHO05D008784 1.4e-17 93.2 46 87.0
Hma1.2p1_0136F.1_g062120 Hydrangea macrophylla HOM05D007017 ORTHO05D008784 1.9e-17 92.8 46 89.1
MSTRG.2776 Avicennia marina HOM05D007017 ORTHO05D008784 2.4e-17 92.4 71 66.2
Eucgr.J01471 Eucalyptus grandis HOM05D007017 ORTHO05D008784 2.4e-17 92.4 47 80.9
COL.COLO4_16189 Corchorus olitorius HOM05D007017 ORTHO05D008784 4.1e-17 91.7 47 80.9
CsaV3_4G008810 Cucumis sativus L. HOM05D007017 ORTHO05D008784 4.1e-17 91.7 47 85.1
Lsat_1_v5_gn_2_79721 Lactuca sativa HOM05D007017 ORTHO05D008784 4.1e-17 91.7 47 85.1
Atru.chr8.853 Acer truncatum HOM05D007017 ORTHO05D008784 5.4e-17 91.3 47 83.0
Glyma.13G046700 Glycine max HOM05D007017 ORTHO05D008784 5.4e-17 91.3 47 87.2
MD09G1085700 Malus domestica HOM05D007017 ORTHO05D008784 5.4e-17 91.3 47 80.9
Nn4g23751 Nelumbo nucifera HOM05D007017 ORTHO05D008784 5.4e-17 91.3 47 83.0
Potri.017G112900 Populus trichocarpa HOM05D007017 ORTHO05D008784 5.4e-17 91.3 47 83.0
Sabra17G0093600 Salix brachista HOM05D007017 ORTHO05D008784 5.4e-17 91.3 47 83.0
ClCG07G016280 Citrullus lanatus HOM05D007017 ORTHO05D008784 7.0e-17 90.9 47 85.1
Ciclev10011658m.g Citrus clementina HOM05D007017 ORTHO05D008784 7.0e-17 90.9 47 83.0
MELO3C018937.2 Cucumis melo HOM05D007017 ORTHO05D008784 7.0e-17 90.9 47 85.1
Aqoxy3G00357 Aquilegia oxysepala HOM05D007017 ORTHO05D008784 9.2e-17 90.5 47 80.9
ECA238G4322 Erigeron canadensis HOM05D007017 ORTHO05D008784 9.2e-17 90.5 45 88.9
Duzib268G1766 Durio zibethinus HOM05D007017 ORTHO05D008784 1.2e-16 90.1 47 80.9
Prupe.3G239300 Prunus persica HOM05D007017 ORTHO05D008784 1.6e-16 89.7 47 76.6
QL02p051504 Quercus lobata HOM05D007017 ORTHO05D008784 1.6e-16 89.7 47 80.9
MD17G1074600 Malus domestica HOM05D007017 ORTHO05D008784 2.1e-16 89.4 47 78.7
Phvul.004G063600 Phaseolus vulgaris HOM05D007017 ORTHO05D008784 2.7e-16 89.0 47 85.1
GSVIVG01031073001 Vitis vinifera HOM05D007017 ORTHO05D008784 2.7e-16 89.0 47 83.0
Cfa007942 Carpinus fangiana HOM05D007017 ORTHO05D008784 4.6e-16 88.2 46 84.8
Haze_14133 Corylus avellana HOM05D007017 ORTHO05D008784 4.6e-16 88.2 46 84.8
Manes.02G066900 Manihot esculenta HOM05D007017 ORTHO05D008784 4.6e-16 88.2 47 76.6
VMungo0464G1783 Vigna mungo HOM05D007017 ORTHO05D008784 4.6e-16 88.2 47 83.0
CANSAT64G2504 Cannabis sativa HOM05D007017 ORTHO05D008784 6.0e-16 87.8 47 76.6
RcHm_v2.0_Chr2g0163101 Rosa chinensis HOM05D007017 ORTHO05D008784 6.0e-16 87.8 47 74.5
Lj2A446T49 Lonicera japonica HOM05D007017 ORTHO05D008784 7.8e-16 87.4 45 86.7
Nitab4.5_0004118g0120 Nicotiana tabacum HOM05D007017 ORTHO05D008784 7.8e-16 87.4 47 76.6
FAN05G2172 Fragaria x ananassa HOM05D007017 ORTHO05D008784 1.0e-15 87.0 47 74.5
Peaxi162Scf01327g00137 Petunia axillaris HOM05D007017 ORTHO05D008784 1.0e-15 87.0 47 74.5
PGR042G1577 Punica granatum HOM05D007017 ORTHO05D008784 1.0e-15 87.0 47 76.6
Nitab4.5_0008781g0010 Nicotiana tabacum HOM05D007017 ORTHO05D008784 1.3e-15 86.7 47 76.6
Rhsim08G0081400 Rhododendron simsii HOM05D007017 ORTHO05D008784 1.3e-15 86.7 47 80.9
Sed0020279 Sechium edule HOM05D007017 ORTHO05D008784 1.3e-15 86.7 47 80.9
FvH4_6g45321 Fragaria vesca HOM05D007017 ORTHO05D008784 1.7e-15 86.3 47 74.5
FAN14G1925 Fragaria x ananassa HOM05D007017 ORTHO05D008784 1.7e-15 86.3 47 74.5
vmacro18085 Vaccinium macrocarpon HOM05D007017 ORTHO05D008784 1.7e-15 86.3 47 76.6
Actinidia26295 Actinidia chinensis HOM05D007017 ORTHO05D008784 2.3e-15 85.9 47 78.7
Glyma.19G045800 Glycine max HOM05D007017 ORTHO05D008784 2.3e-15 85.9 47 83.0
Solyc02g085760.2 Solanum lycopersicum HOM05D007017 ORTHO05D008784 2.3e-15 85.9 47 74.5
PGSC0003DMG400012677 Solanum tuberosum HOM05D007017 ORTHO05D008784 2.3e-15 85.9 47 74.5
MBI09_g05205_MAGBIO Magnolia biondii HOM05D007017 ORTHO05D008784 3.0e-15 85.5 47 74.5
TWI53G1784 Tripterygium wilfordii HOM05D007017 ORTHO05D008784 3.0e-15 85.5 46 80.4
TAR371G1142 Trochodendron aralioides HOM05D007017 ORTHO05D008784 3.9e-15 85.1 47 78.7
unitig_65.g29881 Utricularia gibba HOM05D007017 ORTHO05D008784 3.9e-15 85.1 47 76.6
Gorai.007G180600 Gossypium raimondii HOM05D007017 ORTHO05D008784 6.6e-15 84.3 47 76.6
BcaC02g09651 Brassica carinata HOM05D007017 ORTHO05D008784 8.6e-15 84.0 52 73.1
A04p11460 Brassica napus HOM05D007017 ORTHO05D008784 8.6e-15 84.0 52 73.1
BraA04t16811Z Brassica rapa HOM05D007017 ORTHO05D008784 8.6e-15 84.0 52 73.1
CDE08G0058 Ceratophyllum demersum HOM05D007017 ORTHO05D008784 8.6e-15 84.0 47 74.5
AUR62014535 Chenopodium quinoa HOM05D007017 ORTHO05D008784 8.6e-15 84.0 47 74.5
Gohir.A11G162600 Gossypium hirsutum HOM05D007017 ORTHO05D008784 8.6e-15 84.0 47 76.6
BcaB02g08005 Brassica carinata HOM05D007017 ORTHO05D008784 1.1e-14 83.6 47 76.6
Cpa.g.sc179.20 Carica papaya HOM05D007017 ORTHO05D008784 1.1e-14 83.6 45 82.2
AUR62008968 Chenopodium quinoa HOM05D007017 ORTHO05D008784 1.1e-14 83.6 47 74.5
Thhalv10027755m.g Eutrema salsugineum HOM05D007017 ORTHO05D008784 1.1e-14 83.6 52 73.1
Sp7g03560 Schrenkiella parvula HOM05D007017 ORTHO05D008784 1.5e-14 83.2 52 71.2
Actinidia17627 Actinidia chinensis HOM05D007017 ORTHO05D008784 1.9e-14 82.8 47 76.6
CARHR213910 Cardamine hirsuta HOM05D007017 ORTHO05D008784 1.9e-14 82.8 47 76.6
EL10Ac2g04602 Beta vulgaris HOM05D007017 ORTHO05D008784 3.3e-14 82.0 46 69.6
THA.LOC104823866 Tarenaya hassleriana HOM05D007017 ORTHO05D008784 3.3e-14 82.0 47 74.5
HanXRQChr14g0440971 Helianthus annuus HOM05D007017 ORTHO05D008784 4.3e-14 81.6 44 81.8
SalBow3G2350 Salvia bowleyana HOM05D007017 ORTHO05D008784 4.3e-14 81.6 47 68.1
CAN.G358.138 Capsicum annuum HOM05D007017 ORTHO05D008784 5.6e-14 81.3 47 72.3
Aa31LG9G17040 Aethionema arabicum HOM05D007017 ORTHO05D008784 9.5e-14 80.5 52 69.2
Hund13731 Selenicereus undatus HOM05D007017 ORTHO05D008784 9.5e-14 80.5 46 71.7
AL7G52060 Arabidopsis lyrata HOM05D007017 ORTHO05D008784 1.6e-13 79.7 52 69.2
AT5G38510 Arabidopsis thaliana HOM05D007017 ORTHO05D008784 1.6e-13 79.7 52 69.2
BcaC08g44383 Brassica carinata HOM05D007017 ORTHO05D008784 1.6e-13 79.7 47 74.5
A07p19740 Brassica napus HOM05D007017 ORTHO05D008784 1.6e-13 79.7 47 74.5
C06p18160 Brassica napus HOM05D007017 ORTHO05D008784 1.6e-13 79.7 47 74.5
BolC6t37025H Brassica oleracea HOM05D007017 ORTHO05D008784 1.6e-13 79.7 47 74.5
BraA07t29674Z Brassica rapa HOM05D007017 ORTHO05D008784 1.6e-13 79.7 47 74.5
C04p45150 Brassica napus HOM05D007017 ORTHO05D008784 2.1e-13 79.3 52 71.2
BolC4t26095H Brassica oleracea HOM05D007017 ORTHO05D008784 2.1e-13 79.3 52 71.2
BcaB06g27227 Brassica carinata HOM05D007017 ORTHO05D008784 8.1e-13 77.4 43 83.7
Zm00001eb204300 Zea mays HOM05D007017 ORTHO05D008784 1.1e-12 77.0 47 70.2
DCAR_017209 Daucus carota HOM05D007017 ORTHO05D008784 1.5e-11 73.2 47 63.8
Pp3c19_20960 Physcomitrium patens HOM05D007017 ORTHO05D008784 5.8e-11 71.2 46 58.7
Pp3c22_8560 Physcomitrium patens HOM05D007017 ORTHO05D008784 5.8e-11 71.2 47 57.4
Mapoly0336s0001 Marchantia polymorpha HOM05D007017 ORTHO05D008784 1.1e-09 67.0 47 53.2
SMO361G0689 Selaginella moellendorffii HOM05D007017 ORTHO05D008784 1.4e-09 66.6 44 59.1
SMO361G0424 Selaginella moellendorffii HOM05D007017 ORTHO05D008784 1.9e-09 66.2 44 56.8
SMO147G0046 Selaginella moellendorffii HOM05D007017 ORTHO05D008784 3.2e-09 65.5 47 57.4
unitig_62.g23452 Utricularia gibba HOM05D007017 ORTHO05D008784 4.6e-08 61.6 83 43.4
Dinv34844 Davidia involucrata HOM05D007017 ORTHO05D008784 2.5e-06 55.8 32 78.1


User provided reference genes

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