Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 7.6e-300 1033.1 541 100.0
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 2.1e-220 769.2 525 79.0
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 8.4e-214 747.3 524 77.1
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 6.0e-204 714.5 524 73.5
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 2.8e-201 705.7 506 74.1
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 2.5e-194 682.6 493 74.8
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 2.5e-194 682.6 493 74.8
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 1.7e-190 669.8 521 69.7
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 2.1e-185 652.9 519 68.4
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 8.5e-182 641.0 512 70.5
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 1.2e-164 583.9 574 58.7
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 1.6e-159 567.0 420 71.2
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 2.2e-153 546.6 534 56.6
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 2.7e-151 539.7 534 56.9
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 1.9e-149 533.5 489 57.5
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 8.0e-148 528.1 528 57.8
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 4.0e-147 525.8 530 55.7
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 3.4e-146 522.7 508 56.3
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 2.2e-145 520.0 507 56.2
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 8.3e-145 518.1 511 56.0
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 3.1e-144 516.2 507 56.0
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 7.0e-144 515.0 501 56.1
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 1.2e-143 514.2 513 55.9
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 2.0e-143 513.5 508 56.7
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 2.7e-143 513.1 506 56.3
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 5.9e-143 511.9 510 55.9
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 7.7e-143 511.5 517 56.9
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 6.5e-142 508.4 504 55.6
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.3e-139 500.0 520 54.0
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 3.1e-136 489.6 531 52.7
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 9.2e-136 488.0 499 55.7
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.2e-135 487.6 544 52.8
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 5.9e-135 485.3 522 52.1
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 1.3e-134 484.2 499 52.3
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 7.3e-133 478.4 455 58.9
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 6.1e-132 475.3 493 55.2
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 3.4e-130 469.5 526 51.3
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 1.3e-129 467.6 554 49.3
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 1.7e-129 467.2 505 53.5
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 4.9e-129 465.7 477 53.7
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 4.9e-129 465.7 536 48.9
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 3.2e-128 463.0 511 49.9
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 2.0e-127 460.3 518 50.4
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 3.5e-127 459.5 498 52.4
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 3.5e-127 459.5 506 50.8
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 1.3e-126 457.6 527 50.1
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 1.3e-126 457.6 523 51.4
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 1.1e-125 454.5 520 50.2
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 4.3e-125 452.6 608 46.1
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 5.6e-125 452.2 490 51.0
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 1.2e-124 451.1 518 49.8
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 2.1e-124 450.3 518 48.3
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 3.1e-123 446.4 535 50.5
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 1.2e-122 444.5 545 47.7
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 2.6e-122 443.4 507 49.3
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 5.8e-122 442.2 505 49.3
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 7.5e-122 441.8 494 51.4
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 1.3e-121 441.0 500 49.2
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 1.7e-121 440.7 495 49.1
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 1.7e-121 440.7 505 49.5
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 2.2e-121 440.3 513 50.7
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 3.7e-121 439.5 486 50.4
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 8.3e-121 438.3 500 49.2
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 1.4e-120 437.6 484 49.6
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 3.2e-120 436.4 477 51.2
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 7.0e-120 435.3 509 50.3
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 1.2e-119 434.5 492 50.8
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 1.6e-119 434.1 513 48.7
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 2.0e-119 433.7 494 50.2
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 2.0e-119 433.7 502 48.2
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 2.7e-119 433.3 526 47.9
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 1.3e-118 431.0 508 47.4
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 1.1e-117 427.9 499 49.1
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 1.5e-117 427.6 503 48.7
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 4.7e-116 422.5 406 56.7
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 1.4e-115 421.0 509 48.5
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 3.1e-115 419.9 469 50.5
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 1.5e-114 417.5 514 47.5
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 2.0e-114 417.2 472 50.4
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 1.2e-111 407.9 571 44.8
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 6.0e-111 405.6 473 48.0
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 2.3e-110 403.7 500 47.6
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 3.9e-110 402.9 501 48.7
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 1.1e-107 394.8 454 51.5
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 4.0e-107 392.9 525 44.4
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 1.2e-106 391.3 532 44.9
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 7.6e-106 388.7 366 58.2
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 3.3e-101 373.2 496 45.0
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 3.3e-101 373.2 536 44.0
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 5.8e-98 362.5 346 58.7
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 4.2e-96 356.3 561 41.0
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 6.2e-92 342.4 433 46.2
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 5.3e-91 339.3 212 83.0
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 1.9e-85 320.9 427 48.5
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 6.2e-84 315.8 388 46.6
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 1.1e-83 315.1 556 37.8
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 4.5e-82 309.7 552 37.1
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 2.4e-75 287.3 490 40.0
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 2.9e-73 280.4 440 41.1
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 2.2e-68 264.2 194 70.1
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 2.2e-65 254.2 383 36.8
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 7.2e-64 249.2 336 41.1
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 3.9e-62 243.4 502 33.5
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 9.1e-59 232.3 372 39.0
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 4.7e-55 219.9 186 60.2
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 1.8e-54 218.0 301 38.9
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 7.7e-50 202.6 273 46.9
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 1.6e-47 194.9 200 54.5
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 1.5e-40 171.8 229 45.4
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 3.2e-40 170.6 151 59.6
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 1.8e-30 138.3 164 48.8
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 3.0e-30 137.5 255 36.9
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 3.7e-20 104.0 502 25.3
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 2.0e-18 98.2 143 43.4
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 3.0e-14 84.3 67 58.2
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 6.0e-10 70.1 70 50.0
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 5.0e-09 67.0 131 35.9
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 5.0e-09 67.0 113 34.5
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 8.6e-09 66.2 54 61.1
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 3.3e-08 64.3 52 63.5
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 2.3e-06 58.2 97 40.2
SEGI_37044 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 3.1e-06 57.8 89 36.0


User provided reference genes

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