Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 1.8e-92 342.8 210 100.0
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 5.4e-60 235.0 210 71.4
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 6.6e-50 201.4 214 70.6
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 3.3e-49 199.1 207 68.1
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 2.9e-45 186.0 212 57.1
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 1.2e-43 180.6 212 56.6
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 2.3e-42 176.4 208 55.8
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 3.3e-41 172.6 210 54.8
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 1.2e-38 164.1 200 54.0
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 1.2e-38 164.1 183 63.4
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 2.5e-36 156.4 166 73.5
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 4.3e-33 145.6 186 57.0
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 1.6e-32 143.7 183 51.4
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 2.1e-32 143.3 197 53.3
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 2.8e-32 142.9 184 55.4
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 1.1e-31 141.0 204 52.0
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 1.4e-31 140.6 202 48.5
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 1.4e-31 140.6 204 49.0
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 2.4e-31 139.8 203 52.7
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 3.1e-31 139.4 201 47.8
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 3.4e-30 136.0 204 45.1
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 4.5e-30 135.6 200 48.0
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 1.3e-29 134.0 204 46.6
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 1.3e-29 134.0 191 46.1
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 2.2e-29 133.3 181 50.8
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 3.8e-29 132.5 206 45.1
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 6.5e-29 131.7 207 49.8
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 6.5e-29 131.7 208 45.2
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 2.5e-28 129.8 205 50.2
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 4.2e-28 129.0 215 47.9
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 4.2e-28 129.0 184 56.0
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 5.5e-28 128.6 186 47.3
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 9.3e-28 127.9 197 45.7
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 1.0e-26 124.4 193 44.0
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 1.3e-26 124.0 190 44.7
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 1.3e-26 124.0 184 52.2
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 1.8e-26 123.6 199 45.7
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 2.3e-26 123.2 190 44.7
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 3.0e-26 122.9 187 46.5
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 3.9e-26 122.5 204 41.7
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 5.1e-26 122.1 219 45.2
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 6.7e-26 121.7 187 46.0
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 6.7e-26 121.7 187 46.0
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 6.7e-26 121.7 196 46.9
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 2.5e-25 119.8 200 45.5
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 3.3e-25 119.4 170 48.8
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 3.3e-25 119.4 209 52.6
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 3.3e-25 119.4 202 49.0
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 4.3e-25 119.0 185 43.8
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 4.3e-25 119.0 167 49.7
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 5.7e-25 118.6 206 48.5
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 5.7e-25 118.6 199 47.2
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 1.6e-24 117.1 210 42.4
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 1.6e-24 117.1 228 43.9
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 1.6e-24 117.1 222 39.6
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 2.2e-24 116.7 172 45.9
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 8.2e-24 114.8 214 44.4
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 1.1e-23 114.4 187 46.0
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 1.8e-23 113.6 198 50.5
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 2.4e-23 113.2 207 42.5
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 2.4e-23 113.2 176 44.9
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 4.1e-23 112.5 179 50.3
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 5.3e-23 112.1 187 44.9
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 6.9e-23 111.7 204 40.7
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 1.2e-22 110.9 204 50.0
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 1.2e-22 110.9 204 50.0
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 2.0e-22 110.2 204 40.7
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 3.4e-22 109.4 172 45.3
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 4.5e-22 109.0 225 40.0
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 5.9e-22 108.6 205 40.5
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 5.9e-22 108.6 182 42.9
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 7.7e-22 108.2 211 43.1
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 1.0e-21 107.8 204 38.7
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 1.0e-21 107.8 202 40.6
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 1.3e-21 107.5 213 45.5
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 1.7e-21 107.1 182 45.6
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 5.0e-21 105.5 181 39.2
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 6.5e-21 105.1 204 37.3
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 8.5e-21 104.8 198 39.4
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 1.1e-20 104.4 204 48.5
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 1.4e-20 104.0 204 38.7
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 1.9e-20 103.6 246 36.2
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 1.9e-20 103.6 194 41.8
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 2.5e-20 103.2 198 38.9
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 7.2e-20 101.7 204 37.7
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 7.2e-20 101.7 245 35.9
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 1.2e-19 100.9 204 48.5
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 1.2e-19 100.9 204 48.0
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 2.1e-19 100.1 159 49.7
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 2.7e-19 99.8 204 40.2
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 6.1e-19 98.6 191 45.5
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 1.8e-18 97.1 165 47.3
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 1.5e-17 94.0 202 41.1
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 3.3e-17 92.8 200 38.5
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 3.3e-17 92.8 194 38.1
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 4.3e-17 92.4 161 41.6
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 1.3e-16 90.9 163 42.9
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 1.4e-15 87.4 204 42.2
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 1.4e-15 87.4 124 50.0
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 6.9e-15 85.1 179 43.0
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 3.4e-14 82.8 165 39.4
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 5.9e-14 82.0 205 40.5
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 1.3e-13 80.9 188 45.7
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 1.1e-12 77.8 166 41.0
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 4.2e-12 75.9 166 45.8
BcaB05g22921 Brassica carinata HOM05D001082 ORTHO05D008291 1.6e-11 73.9 173 46.2
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 2.1e-11 73.6 203 41.9
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 3.6e-11 72.8 159 37.7
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 1.0e-10 71.2 166 35.5
Actinidia21075 Actinidia chinensis HOM05D006618 ORTHO05D008291 1.4e-10 70.9 54 70.4
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 1.8e-10 70.5 138 44.9
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 1.1e-09 67.8 127 43.3
SHI15557 Sapria himalayana HOM05D006618 ORTHO05D008291 1.7e-08 63.9 62 59.7
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 2.2e-08 63.5 128 38.3
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 4.8e-08 62.4 114 43.0
SEGI_31360 Sequoiadendron giganteum HOM05D006618 ORTHO05D008291 2.4e-07 60.1 47 70.2
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 4.1e-07 59.3 69 46.4


User provided reference genes

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