Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32262 Trifolium pratense HOM05D000051 ORTHO05D000015 1.8e-139 499.2 244 100.0
TPR.G32234 Trifolium pratense HOM05D000051 ORTHO05D000015 9.0e-91 337.4 269 70.6
Medtr8g445780 Medicago truncatula HOM05D000051 ORTHO05D000015 6.1e-63 245.0 263 54.0
Medtr8g014260 Medicago truncatula HOM05D000051 ORTHO05D000015 1.4e-51 207.2 258 48.4
TPR.G32225 Trifolium pratense HOM05D000051 ORTHO05D000015 4.2e-40 169.1 263 42.2
Medtr8g058970 Medicago truncatula HOM05D000051 ORTHO05D000015 4.0e-38 162.5 258 39.5
Medtr4g024745 Medicago truncatula HOM05D000051 ORTHO05D000015 1.5e-37 160.6 206 47.6
Medtr4g024710 Medicago truncatula HOM05D000051 ORTHO05D000015 6.3e-36 155.2 201 47.8
Ca_22828_v3 Cicer arietinum L. HOM05D000051 ORTHO05D000015 1.7e-33 147.1 239 41.8
Medtr8g468840 Medicago truncatula HOM05D000051 ORTHO05D000015 2.3e-33 146.7 254 37.0
Medtr8g077460 Medicago truncatula HOM05D000051 ORTHO05D000015 6.6e-33 145.2 231 42.4
Medtr8g062270 Medicago truncatula HOM05D000051 ORTHO05D000015 8.6e-33 144.8 245 38.8
Medtr8g468810 Medicago truncatula HOM05D000051 ORTHO05D000015 8.6e-33 144.8 256 39.1
Medtr8g468760 Medicago truncatula HOM05D000051 ORTHO05D000015 4.3e-32 142.5 223 40.8
Medtr8g467800 Medicago truncatula HOM05D000051 ORTHO05D000015 5.6e-32 142.1 264 36.4
Medtr2g083840 Medicago truncatula HOM05D000051 ORTHO05D000015 1.6e-31 140.6 253 38.3
Medtr5g092960 Medicago truncatula HOM05D000051 ORTHO05D000015 1.6e-31 140.6 262 37.8
Medtr4g032730 Medicago truncatula HOM05D000051 ORTHO05D000015 4.4e-29 132.5 260 37.3
Lj3g0007127 Lotus japonicus HOM05D000051 ORTHO05D000015 9.8e-29 131.3 255 40.8
TPR.G36318 Trifolium pratense HOM05D000051 ORTHO05D000015 9.8e-29 131.3 184 47.8
Medtr8g014210 Medicago truncatula HOM05D000051 ORTHO05D000015 4.6e-26 122.5 142 50.0
Lj3g0008460 Lotus japonicus HOM05D000051 ORTHO05D000015 2.3e-25 120.2 244 38.5
Ca_26129_v3 Cicer arietinum L. HOM05D000051 ORTHO05D000015 3.0e-25 119.8 250 36.4
Ca_27176_v3 Cicer arietinum L. HOM05D000051 ORTHO05D000015 1.1e-22 111.3 238 36.1
Medtr4g050250 Medicago truncatula HOM05D000051 ORTHO05D000015 5.2e-22 109.0 269 34.2
Medtr8g014160 Medicago truncatula HOM05D000051 ORTHO05D000015 8.9e-22 108.2 181 40.3
arahy.Tifrunner.gnm1.ann1.YA0WF3 Arachis hypogaea HOM05D000051 ORTHO05D000015 1.1e-19 101.3 267 32.6
arahy.Tifrunner.gnm1.ann1.3LX766 Arachis hypogaea HOM05D000051 ORTHO05D000015 1.9e-19 100.5 250 31.2
arahy.Tifrunner.gnm1.ann1.DTPT92 Arachis hypogaea HOM05D000051 ORTHO05D000015 5.4e-19 99.0 250 31.2
Ca_02474_v3 Cicer arietinum L. HOM05D000051 ORTHO05D000015 1.2e-18 97.8 176 35.2
arahy.Tifrunner.gnm1.ann1.66QM7D Arachis hypogaea HOM05D000051 ORTHO05D000015 1.6e-18 97.4 274 31.4
Medtr8g058965 Medicago truncatula HOM05D000051 ORTHO05D000015 1.6e-18 97.4 277 33.6
Ca_22826_v3 Cicer arietinum L. HOM05D000051 ORTHO05D000015 6.0e-18 95.5 218 32.1
Ca_22827_v3 Cicer arietinum L. HOM05D000051 ORTHO05D000015 6.0e-18 95.5 218 32.1
arahy.Tifrunner.gnm1.ann1.IJ2J33 Arachis hypogaea HOM05D000051 ORTHO05D000015 1.0e-17 94.7 253 30.4
arahy.Tifrunner.gnm1.ann1.3S1UCG Arachis hypogaea HOM05D000051 ORTHO05D000015 8.6e-17 91.7 261 31.8
Psat4g128920 Pisum sativum HOM05D000051 ORTHO05D000015 8.6e-17 91.7 231 34.2
arahy.Tifrunner.gnm1.ann1.JKK1Y1 Arachis hypogaea HOM05D000051 ORTHO05D000015 1.1e-16 91.3 261 31.4
TPR.G29198 Trifolium pratense HOM05D000051 ORTHO05D000015 1.1e-16 91.3 121 47.9
arahy.Tifrunner.gnm1.ann1.CSTZ0U Arachis hypogaea HOM05D000051 ORTHO05D000015 1.5e-16 90.9 242 31.4
arahy.Tifrunner.gnm1.ann1.KT489S Arachis hypogaea HOM05D000051 ORTHO05D000015 1.5e-16 90.9 231 33.8
arahy.Tifrunner.gnm1.ann1.HEIP7N Arachis hypogaea HOM05D000051 ORTHO05D000015 1.9e-16 90.5 258 31.0
Medtr8g469020 Medicago truncatula HOM05D000051 ORTHO05D000015 3.3e-16 89.7 255 31.0
arahy.Tifrunner.gnm1.ann1.TWR7CT Arachis hypogaea HOM05D000051 ORTHO05D000015 5.6e-16 89.0 268 32.8
Medtr8g467790 Medicago truncatula HOM05D000051 ORTHO05D000015 7.3e-16 88.6 225 34.7
arahy.Tifrunner.gnm1.ann1.G4DFGN Arachis hypogaea HOM05D000051 ORTHO05D000015 9.5e-16 88.2 269 31.6
arahy.Tifrunner.gnm1.ann1.PAB42J Arachis hypogaea HOM05D000051 ORTHO05D000015 9.5e-16 88.2 271 29.9
arahy.Tifrunner.gnm1.ann1.K2HCDK Arachis hypogaea HOM05D000051 ORTHO05D000015 2.1e-15 87.0 221 35.7
arahy.Tifrunner.gnm1.ann1.KTI1GQ Arachis hypogaea HOM05D000051 ORTHO05D000015 3.6e-15 86.3 235 32.8
arahy.Tifrunner.gnm1.ann1.VGF4U8 Arachis hypogaea HOM05D000051 ORTHO05D000015 8.1e-15 85.1 262 32.1
arahy.Tifrunner.gnm1.ann1.C55YK9 Arachis hypogaea HOM05D000051 ORTHO05D000015 4.0e-14 82.8 265 30.6
arahy.Tifrunner.gnm1.ann1.LJ2QE1 Arachis hypogaea HOM05D000051 ORTHO05D000015 6.8e-14 82.0 250 31.2
arahy.Tifrunner.gnm1.ann1.U6KKX5 Arachis hypogaea HOM05D000051 ORTHO05D000015 6.8e-14 82.0 265 31.3
arahy.Tifrunner.gnm1.ann1.NAT98D Arachis hypogaea HOM05D000051 ORTHO05D000015 8.9e-14 81.6 264 31.1
arahy.Tifrunner.gnm1.ann1.YH6MC2 Arachis hypogaea HOM05D000051 ORTHO05D000015 8.9e-14 81.6 244 31.6
arahy.Tifrunner.gnm1.ann1.IT8ZEZ Arachis hypogaea HOM05D000051 ORTHO05D000015 1.5e-13 80.9 258 32.9
arahy.Tifrunner.gnm1.ann1.SVZ6B5 Arachis hypogaea HOM05D000051 ORTHO05D000015 1.5e-13 80.9 230 33.5
arahy.Tifrunner.gnm1.ann1.F8VKIT Arachis hypogaea HOM05D000051 ORTHO05D000015 2.6e-13 80.1 254 32.3
arahy.Tifrunner.gnm1.ann1.YD2F3W Arachis hypogaea HOM05D000051 ORTHO05D000015 3.4e-13 79.7 253 31.6
Psat4g128960 Pisum sativum HOM05D000051 ORTHO05D000015 3.4e-13 79.7 174 34.5
arahy.Tifrunner.gnm1.ann1.X1Z13X Arachis hypogaea HOM05D000051 ORTHO05D000015 9.9e-13 78.2 243 29.6
arahy.Tifrunner.gnm1.ann1.P3E2E5 Arachis hypogaea HOM05D000051 ORTHO05D000015 1.3e-12 77.8 250 32.4
arahy.Tifrunner.gnm1.ann1.U73ZSE Arachis hypogaea HOM05D000051 ORTHO05D000015 2.2e-12 77.0 258 32.9
Medtr8g062010 Medicago truncatula HOM05D000051 ORTHO05D000015 2.2e-12 77.0 235 33.6
Medtr8g070950 Medicago truncatula HOM05D000051 ORTHO05D000015 2.2e-12 77.0 249 31.7
arahy.Tifrunner.gnm1.ann1.7698CX Arachis hypogaea HOM05D000051 ORTHO05D000015 3.7e-12 76.3 258 32.6
Medtr4g113810 Medicago truncatula HOM05D000051 ORTHO05D000015 3.7e-12 76.3 167 33.5
arahy.Tifrunner.gnm1.ann1.X5RC0X Arachis hypogaea HOM05D000051 ORTHO05D000015 6.4e-12 75.5 263 30.4
PSO478G5315 Papaver somniferum HOM05D000051 ORTHO05D000015 8.3e-12 75.1 162 34.0
TPR.G22627 Trifolium pratense HOM05D000051 ORTHO05D000015 1.4e-11 74.3 181 32.6
arahy.Tifrunner.gnm1.ann1.M4CXNN Arachis hypogaea HOM05D000051 ORTHO05D000015 2.4e-11 73.6 247 30.4
arahy.Tifrunner.gnm1.ann1.63SVYK Arachis hypogaea HOM05D000051 ORTHO05D000015 3.2e-11 73.2 261 29.1
arahy.Tifrunner.gnm1.ann1.X93TV7 Arachis hypogaea HOM05D000051 ORTHO05D000015 5.4e-11 72.4 263 30.0
arahy.Tifrunner.gnm1.ann1.35WN1A Arachis hypogaea HOM05D000051 ORTHO05D000015 9.2e-11 71.6 249 29.3
Dinv20164 Davidia involucrata HOM05D000051 ORTHO05D000015 9.2e-11 71.6 181 34.3
arahy.Tifrunner.gnm1.ann1.E2QB0L Arachis hypogaea HOM05D000051 ORTHO05D000015 1.2e-10 71.2 265 29.4
HanXRQChr04g0116071 Helianthus annuus HOM05D001396 ORTHO05D000493 1.2e-10 71.2 243 25.5
arahy.Tifrunner.gnm1.ann1.5FA8WQ Arachis hypogaea HOM05D000051 ORTHO05D000015 2.7e-10 70.1 260 29.6
Psat4g128720 Pisum sativum HOM05D000051 ORTHO05D000015 2.7e-10 70.1 260 29.6
Carub.0005s2678 Capsella rubella HOM05D000689 ORTHO05D000015 3.5e-10 69.7 163 36.2
PSO782G3502 Papaver somniferum HOM05D000051 ORTHO05D000015 4.6e-10 69.3 155 34.8
arahy.Tifrunner.gnm1.ann1.J3P11A Arachis hypogaea HOM05D000051 ORTHO05D000015 6.0e-10 68.9 275 30.5
BolC9t57625H Brassica oleracea HOM05D000051 ORTHO05D000015 6.0e-10 68.9 150 37.3
arahy.Tifrunner.gnm1.ann1.6V8N23 Arachis hypogaea HOM05D000051 ORTHO05D000015 7.8e-10 68.6 252 28.6
arahy.Tifrunner.gnm1.ann1.GL93TL Arachis hypogaea HOM05D000051 ORTHO05D000015 1.0e-09 68.2 263 28.5
arahy.Tifrunner.gnm1.ann1.DNVT9B Arachis hypogaea HOM05D000051 ORTHO05D000015 1.3e-09 67.8 227 30.8
Psat4g128640 Pisum sativum HOM05D000051 ORTHO05D000015 1.7e-09 67.4 159 37.1
AT4G26340 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 6.6e-09 65.5 138 36.2
Lsat_1_v5_gn_7_24461 Lactuca sativa HOM05D001396 ORTHO05D000493 6.6e-09 65.5 183 29.0
Medtr5g021550 Medicago truncatula HOM05D000051 ORTHO05D000015 1.1e-08 64.7 63 54.0
Medtr8g062080 Medicago truncatula HOM05D000051 ORTHO05D000015 1.5e-08 64.3 262 29.8
BcaC04g20097 Brassica carinata HOM05D000051 ORTHO05D000015 4.3e-08 62.8 150 36.7
QL08p020672 Quercus lobata HOM05D000051 ORTHO05D000015 4.3e-08 62.8 173 34.7
GSVIVG01003198001 Vitis vinifera HOM05D001396 ORTHO05D000493 4.3e-08 62.8 188 30.3
arahy.Tifrunner.gnm1.ann1.593TB0 Arachis hypogaea HOM05D000051 ORTHO05D000015 5.6e-08 62.4 256 30.5
BraA10t43468Z Brassica rapa HOM05D000051 ORTHO05D000015 7.3e-08 62.0 152 37.5
arahy.Tifrunner.gnm1.ann1.KU1CJZ Arachis hypogaea HOM05D000051 ORTHO05D000015 9.5e-08 61.6 171 31.0
arahy.Tifrunner.gnm1.ann1.EWQ7EA Arachis hypogaea HOM05D000051 ORTHO05D000015 1.2e-07 61.2 175 32.6
Migut.L00791 Erythranthe guttata HOM05D000051 ORTHO05D000015 1.6e-07 60.8 187 29.4
Migut.N01904 Erythranthe guttata HOM05D000051 ORTHO05D000015 1.6e-07 60.8 234 31.2
QL08p011216 Quercus lobata HOM05D000051 ORTHO05D000015 1.6e-07 60.8 180 32.8
Thecc.07G080800 Theobroma cacao HOM05D000051 ORTHO05D000015 1.6e-07 60.8 210 28.6
Thhalv10006004m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 2.1e-07 60.5 137 35.0
Lsat_1_v5_gn_7_24741 Lactuca sativa HOM05D001396 ORTHO05D000493 2.1e-07 60.5 174 31.0
PSO339G1079 Papaver somniferum HOM05D000051 ORTHO05D000015 2.1e-07 60.5 184 28.8
RcHm_v2.0_Chr2g0115721 Rosa chinensis HOM05D000051 ORTHO05D000015 2.1e-07 60.5 217 29.0
arahy.Tifrunner.gnm1.ann1.CYZ9BB Arachis hypogaea HOM05D000051 ORTHO05D000015 2.8e-07 60.1 256 31.2
MD03G1253200 Malus domestica HOM05D000051 ORTHO05D000015 2.8e-07 60.1 191 29.8
RcHm_v2.0_Chr5g0028411 Rosa chinensis HOM05D000051 ORTHO05D000015 2.8e-07 60.1 242 26.0
BcaB01g00147 Brassica carinata HOM05D000051 ORTHO05D000015 3.6e-07 59.7 206 30.1
C01p32180 Brassica napus HOM05D000689 ORTHO05D000015 3.6e-07 59.7 189 30.7
Medtr8g014290 Medicago truncatula HOM05D000051 ORTHO05D000015 3.6e-07 59.7 62 53.2
PSO675G4294 Papaver somniferum HOM05D000051 ORTHO05D009405 3.6e-07 59.7 181 26.0
arahy.Tifrunner.gnm1.ann1.ZPPD60 Arachis hypogaea HOM05D000051 ORTHO05D000015 6.2e-07 58.9 201 31.3
Medtr8g062300 Medicago truncatula HOM05D000051 ORTHO05D000015 6.2e-07 58.9 286 25.2
PSO478G2386 Papaver somniferum HOM05D000051 ORTHO05D000015 8.1e-07 58.5 105 38.1
Aa31LG3G3950 Aethionema arabicum HOM05D000051 ORTHO05D000015 1.1e-06 58.2 103 35.9
Cc01_g12550 Coffea canephora HOM05D000051 ORTHO05D000015 1.1e-06 58.2 134 38.1
PSO063G3331 Papaver somniferum HOM05D000051 ORTHO05D000015 1.1e-06 58.2 192 26.0
Prupe.4G151700 Prunus persica HOM05D000051 ORTHO05D000015 1.1e-06 58.2 174 30.5
BcaC06g32756 Brassica carinata HOM05D000051 ORTHO05D000015 1.4e-06 57.8 166 31.9
Dinv40490 Davidia involucrata HOM05D001396 ORTHO05D000493 1.8e-06 57.4 172 26.2
Lsat_1_v5_gn_5_151640 Lactuca sativa HOM05D001396 ORTHO05D000493 1.8e-06 57.4 122 33.6
PSO173G0112 Papaver somniferum HOM05D000051 ORTHO05D000015 1.8e-06 57.4 176 29.5
vmacro11749 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 1.8e-06 57.4 189 31.7
BcaB01g02571 Brassica carinata HOM05D000051 ORTHO05D000015 2.4e-06 57.0 169 33.7
TPR.G7296 Trifolium pratense HOM05D000051 ORTHO05D000015 2.4e-06 57.0 49 59.2
TAR624G0459 Trochodendron aralioides HOM05D001396 ORTHO05D000493 2.4e-06 57.0 161 31.1
Migut.M00541 Erythranthe guttata HOM05D000051 ORTHO05D000015 3.1e-06 56.6 229 27.1
Migut.M00831 Erythranthe guttata HOM05D000051 ORTHO05D000015 3.1e-06 56.6 171 30.4
Sp5g33780 Schrenkiella parvula HOM05D000051 ORTHO05D000015 3.1e-06 56.6 169 31.4
SGA_v2.0_scaffold15G07283 Striga asiatica HOM05D000051 ORTHO05D000015 3.1e-06 56.6 183 27.9
Dinv38187 Davidia involucrata HOM05D000051 ORTHO05D000015 4.0e-06 56.2 199 32.7
AL5G30872 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.2e-06 55.8 206 29.1
AL7G26600 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.2e-06 55.8 154 31.2
Thhalv10005988m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 5.2e-06 55.8 138 34.1
AL8G32070 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.8e-06 55.5 147 36.7
PSO339G1005 Papaver somniferum HOM05D000051 ORTHO05D000015 6.8e-06 55.5 163 30.7
PSO675G8004 Papaver somniferum HOM05D000051 ORTHO05D000015 6.8e-06 55.5 171 31.0
PSO832G2501 Papaver somniferum HOM05D000051 ORTHO05D000015 8.9e-06 55.1 178 29.8


User provided reference genes

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