Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 2.3e-271 938.3 496 100.0
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 3.4e-238 828.2 496 87.7
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 2.9e-237 825.1 497 87.3
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 4.2e-220 768.1 496 82.7
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 1.7e-208 729.6 497 76.7
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 5.5e-204 714.5 496 76.4
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 2.3e-202 709.1 496 73.8
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 4.8e-200 701.4 496 75.0
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 9.1e-199 697.2 496 74.2
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 7.7e-198 694.1 504 73.4
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 4.5e-190 668.3 498 73.3
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 2.9e-189 665.6 498 73.5
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 9.8e-177 624.0 501 69.5
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 2.9e-176 622.5 499 67.9
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 4.9e-176 621.7 497 65.6
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 7.0e-175 617.8 498 66.5
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 8.6e-173 610.9 501 65.7
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 1.2e-169 600.5 499 65.9
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 1.7e-168 596.7 495 64.6
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 3.7e-168 595.5 497 64.2
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 3.7e-168 595.5 501 65.1
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 8.3e-168 594.3 497 65.4
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 5.4e-167 591.7 502 65.7
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 2.0e-166 589.7 502 65.1
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 6.0e-166 588.2 499 64.9
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 1.3e-165 587.0 500 62.0
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 8.6e-165 584.3 497 62.8
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 1.5e-164 583.6 510 62.7
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 2.5e-164 582.8 497 63.2
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 1.6e-163 580.1 499 63.7
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 1.6e-163 580.1 498 61.8
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 2.8e-163 579.3 501 64.1
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 3.6e-163 578.9 499 63.3
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 1.4e-162 577.0 495 63.6
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 3.1e-162 575.9 497 63.0
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 6.8e-162 574.7 499 63.1
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 6.8e-162 574.7 499 63.1
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 1.2e-161 573.9 499 63.7
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 1.5e-161 573.5 499 63.3
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 7.5e-161 571.2 495 63.0
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 4.9e-160 568.5 500 63.4
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 8.3e-160 567.8 498 60.6
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 1.2e-158 563.9 489 62.4
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 3.5e-158 562.4 496 62.5
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 6.0e-158 561.6 497 61.8
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 5.1e-157 558.5 515 60.6
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 1.1e-156 557.4 500 61.2
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 1.6e-155 553.5 497 59.6
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 4.7e-155 552.0 500 59.4
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 4.0e-154 548.9 500 59.6
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 8.9e-154 547.7 508 59.3
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 2.6e-153 546.2 505 60.8
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 4.9e-152 542.0 514 57.4
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 8.4e-152 541.2 495 60.6
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 2.1e-150 536.6 523 58.9
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 1.3e-149 533.9 498 58.6
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 6.6e-149 531.6 551 55.4
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 1.1e-148 530.8 508 58.5
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 1.5e-148 530.4 500 59.6
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 1.1e-146 524.2 516 57.8
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 1.1e-146 524.2 526 57.2
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 1.4e-146 523.9 520 60.2
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 1.2e-145 520.8 518 57.1
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 3.8e-144 515.8 518 56.2
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 1.9e-143 513.5 516 57.6
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 2.1e-142 510.0 513 54.0
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 1.0e-141 507.7 501 59.7
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 3.0e-141 506.1 511 57.5
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 8.7e-141 504.6 509 55.2
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 1.1e-140 504.2 509 57.2
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 4.8e-139 498.8 511 56.0
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 1.4e-138 497.3 512 57.0
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 9.0e-138 494.6 526 54.9
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 1.5e-137 493.8 512 54.7
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 3.8e-136 489.2 506 54.9
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 1.4e-135 487.3 546 52.7
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 1.4e-135 487.3 495 57.0
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 4.2e-135 485.7 516 55.0
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 9.3e-135 484.6 510 54.1
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 1.5e-132 477.2 512 55.1
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 1.6e-131 473.8 511 55.2
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 2.1e-131 473.4 504 53.6
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 6.9e-130 468.4 511 54.4
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 2.6e-129 466.5 509 54.8
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 5.8e-129 465.3 508 53.7
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 2.2e-128 463.4 511 55.8
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 2.2e-128 463.4 408 60.3
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 3.8e-128 462.6 511 55.6
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 1.5e-124 450.7 503 53.3
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 5.8e-121 438.7 501 54.5
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 4.9e-120 435.6 345 63.5
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 9.3e-119 431.4 359 66.3
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 1.3e-117 427.6 364 65.9
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 1.8e-117 427.2 499 52.3
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 6.7e-117 425.2 513 50.1
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 1.6e-102 377.5 331 63.4
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 5.0e-96 355.9 520 43.5
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 2.3e-93 347.1 520 42.5
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.7e-91 340.9 504 42.7
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 1.5e-84 317.8 353 54.7
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 4.4e-84 316.2 578 38.1
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 1.5e-63 248.1 190 66.3
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 1.7e-59 234.6 364 43.1
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 1.1e-58 231.9 557 34.1
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 3.0e-40 170.6 188 53.2
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 5.6e-31 139.8 147 51.7
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 6.4e-27 126.3 322 34.2
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 2.7e-25 120.9 108 61.1
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 3.0e-16 90.9 329 30.1
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 3.9e-16 90.5 150 38.0
CANSAT11G2415 Cannabis sativa HOM05D004574 ORTHO05D005612 4.3e-07 60.5 65 49.2
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 2.8e-06 57.8 62 46.8
Oeu040778.1 Olea europaea HOM05D004574 ORTHO05D005612 3.7e-06 57.4 85 42.4
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 6.2e-06 56.6 69 43.5
Glyma.17G104500 Glycine max HOM05D004574 ORTHO05D005612 8.2e-06 56.2 64 51.6
Lalb_Chr12g0198521 Lupinus albus HOM05D004574 ORTHO05D005612 8.2e-06 56.2 52 55.8
MD02G1012700 Malus domestica HOM05D004574 ORTHO05D005612 8.2e-06 56.2 63 42.9


User provided reference genes

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