Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32232 Trifolium pratense HOM05D000009 ORTHO05D000008 2.2e-63 245.7 149 100.0
Medtr7g021000 Medicago truncatula HOM05D000009 ORTHO05D000008 2.6e-32 142.5 121 64.5
Medtr3g027250 Medicago truncatula HOM05D000009 ORTHO05D000008 1.1e-30 137.1 123 70.7
Medtr3g022790 Medicago truncatula HOM05D000009 ORTHO05D000008 2.1e-29 132.9 128 58.6
Medtr3g027420 Medicago truncatula HOM05D000009 ORTHO05D000008 1.1e-27 127.1 136 55.1
TPR.G18811 Trifolium pratense HOM05D000009 ORTHO05D000008 5.6e-27 124.8 110 61.8
TPR.G5894 Trifolium pratense HOM05D000009 ORTHO05D000008 2.1e-26 122.9 112 76.8
Medtr3g015260 Medicago truncatula HOM05D000009 ORTHO05D000008 3.3e-19 99.0 145 43.4
Medtr3g018980 Medicago truncatula HOM05D000009 ORTHO05D000008 1.3e-18 97.1 147 42.2
Medtr3g021100 Medicago truncatula HOM05D000009 ORTHO05D000008 1.3e-18 97.1 104 49.0
Medtr3g019040 Medicago truncatula HOM05D000009 ORTHO05D000008 2.1e-18 96.3 146 41.8
Medtr3g022940 Medicago truncatula HOM05D000009 ORTHO05D000008 3.6e-18 95.5 107 50.5
Medtr3g018930 Medicago truncatula HOM05D000009 ORTHO05D000008 8.1e-18 94.4 147 42.2
Medtr3g035810 Medicago truncatula HOM05D000009 ORTHO05D000008 3.1e-17 92.4 99 50.5
Medtr3g021340 Medicago truncatula HOM05D000009 ORTHO05D000008 4.0e-17 92.0 111 47.7
Medtr3g021170 Medicago truncatula HOM05D000009 ORTHO05D000008 6.9e-17 91.3 118 44.9
Medtr3g022400 Medicago truncatula HOM05D000009 ORTHO05D000008 2.0e-16 89.7 109 44.0
Medtr3g021380 Medicago truncatula HOM05D000009 ORTHO05D000008 2.6e-16 89.4 112 47.3
TPR.G33671 Trifolium pratense HOM05D000009 ORTHO05D000008 3.4e-16 89.0 146 39.7
Medtr3g025360 Medicago truncatula HOM05D000009 ORTHO05D000008 7.6e-16 87.8 109 44.0
TPR.G29626 Trifolium pratense HOM05D000009 ORTHO05D000008 7.6e-16 87.8 57 78.9
Medtr3g019000 Medicago truncatula HOM05D000009 ORTHO05D000008 3.8e-15 85.5 124 41.1
TPR.G36031 Trifolium pratense HOM05D000009 ORTHO05D000008 1.1e-14 84.0 110 42.7
TPR.G9874 Trifolium pratense HOM05D000009 ORTHO05D000008 1.4e-14 83.6 129 41.1
TPR.G33691 Trifolium pratense HOM05D000009 ORTHO05D000008 1.9e-14 83.2 113 42.5
TPR.G33622 Trifolium pratense HOM05D000009 ORTHO05D000008 3.2e-14 82.4 110 44.5
TPR.G25552 Trifolium pratense HOM05D000009 ORTHO05D000008 4.2e-14 82.0 127 41.7
TPR.G32257 Trifolium pratense HOM05D000009 ORTHO05D000008 1.6e-13 80.1 138 39.9
TPR.G567 Trifolium pratense HOM05D000009 ORTHO05D000008 1.6e-13 80.1 147 39.5
Medtr3g021400 Medicago truncatula HOM05D000009 ORTHO05D000008 2.7e-13 79.3 107 47.7
Medtr3g027200 Medicago truncatula HOM05D000009 ORTHO05D000008 1.0e-12 77.4 134 38.8
TPR.G18813 Trifolium pratense HOM05D000009 ORTHO05D000008 1.0e-12 77.4 107 43.0
TPR.G38970 Trifolium pratense HOM05D000009 ORTHO05D000008 1.0e-12 77.4 147 38.1
Glyma.16G079400 Glycine max HOM05D000009 ORTHO05D000008 1.3e-12 77.0 142 33.8
Medtr3g022300 Medicago truncatula HOM05D000009 ORTHO05D000008 2.3e-12 76.3 147 38.8
TPR.G3823 Trifolium pratense HOM05D000009 ORTHO05D000008 3.0e-12 75.9 138 39.1
Psat5g213640 Pisum sativum HOM05D000009 ORTHO05D000008 5.1e-12 75.1 120 40.8
Medtr0425s0020 Medicago truncatula HOM05D000009 ORTHO05D000008 1.1e-11 73.9 147 38.1
Medtr3g022230 Medicago truncatula HOM05D000009 ORTHO05D000008 2.5e-11 72.8 147 37.4
Medtr3g022600 Medicago truncatula HOM05D000009 ORTHO05D000008 7.4e-11 71.2 147 36.7
TPR.G18809 Trifolium pratense HOM05D000009 ORTHO05D000008 1.3e-10 70.5 124 36.3
Prupe.2G046000 Prunus persica HOM05D000009 ORTHO05D000008 1.6e-10 70.1 124 38.7
Duzib168G0273 Durio zibethinus HOM05D000009 ORTHO05D000008 2.1e-10 69.7 105 39.0
Phvul.005G031200 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.1e-10 69.7 146 32.2
Medtr3g022920 Medicago truncatula HOM05D000009 ORTHO05D000008 3.7e-10 68.9 113 40.7
Medtr3g023030 Medicago truncatula HOM05D000009 ORTHO05D000008 8.1e-10 67.8 133 39.1
Prupe.2G046400 Prunus persica HOM05D000009 ORTHO05D000008 3.1e-09 65.9 126 35.7
Prupe.2G046900 Prunus persica HOM05D000009 ORTHO05D000008 5.3e-09 65.1 148 35.1
QL10p045481 Quercus lobata HOM05D000009 ORTHO05D000008 5.3e-09 65.1 131 35.1
TPR.G36882 Trifolium pratense HOM05D000009 ORTHO05D000008 6.9e-09 64.7 145 33.1
CiPaw.14G097400 Carya illinoinensis HOM05D000009 ORTHO05D000008 1.2e-08 63.9 125 34.4
TPR.G15455 Trifolium pratense HOM05D000009 ORTHO05D000008 1.2e-08 63.9 62 56.5
Prupe.2G046700 Prunus persica HOM05D000009 ORTHO05D000008 1.5e-08 63.5 126 34.9
Thecc.09G233700 Theobroma cacao HOM05D000009 ORTHO05D000008 1.5e-08 63.5 130 32.3
CiPaw.14G097300 Carya illinoinensis HOM05D000009 ORTHO05D000008 2.0e-08 63.2 115 33.9
TPR.G9868 Trifolium pratense HOM05D006558 ORTHO05D008424 2.6e-08 62.8 59 52.5
VMungo1080G1599 Vigna mungo HOM05D000009 ORTHO05D000008 2.6e-08 62.8 138 30.4
TPR.G3847 Trifolium pratense HOM05D000009 ORTHO05D000008 4.5e-08 62.0 124 39.5
Medtr8g038570 Medicago truncatula HOM05D000009 ORTHO05D000008 7.6e-08 61.2 116 34.5
CiPaw.14G124500 Carya illinoinensis HOM05D000009 ORTHO05D000008 1.3e-07 60.5 134 30.6
QL04p014440 Quercus lobata HOM05D000009 ORTHO05D000008 1.3e-07 60.5 114 33.3
MD03G1031800 Malus domestica HOM05D000009 ORTHO05D000008 2.2e-07 59.7 128 34.4
Medtr3g022130 Medicago truncatula HOM05D000009 ORTHO05D000008 3.8e-07 58.9 71 50.7
Sabra16G0250100 Salix brachista HOM05D000009 ORTHO05D000008 3.8e-07 58.9 149 33.6
Glyma.03G034800 Glycine max HOM05D000009 ORTHO05D000008 4.9e-07 58.5 118 33.9
Hma1.2p1_0597F.1_g186360 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 4.9e-07 58.5 131 34.4
Hma1.2p1_1187F.1_g265200 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 4.9e-07 58.5 131 34.4
Prupe.6G130000 Prunus persica HOM05D000009 ORTHO05D000008 4.9e-07 58.5 115 30.4
FAN10G3083 Fragaria x ananassa HOM05D000009 ORTHO05D000008 8.4e-07 57.8 48 54.2
FAN10G3239 Fragaria x ananassa HOM05D000009 ORTHO05D000008 8.4e-07 57.8 48 54.2
MD00G1203700 Malus domestica HOM05D000009 ORTHO05D000008 8.4e-07 57.8 123 34.1
FAN03G2074 Fragaria x ananassa HOM05D001474 ORTHO05D001461 1.1e-06 57.4 48 54.2
RcHm_v2.0_Chr5g0045901 Rosa chinensis HOM05D000009 ORTHO05D000008 1.1e-06 57.4 113 31.0
Cpa.g.sc10.207 Carica papaya HOM05D000009 ORTHO05D000008 1.4e-06 57.0 131 32.1
MD07G1050700 Malus domestica HOM05D000009 ORTHO05D000008 1.4e-06 57.0 142 30.3
MD07G1056600 Malus domestica HOM05D000009 ORTHO05D000008 1.4e-06 57.0 127 30.7
RcHm_v2.0_Chr5g0044001 Rosa chinensis HOM05D000009 ORTHO05D000008 1.4e-06 57.0 111 32.4
FvH4_7g11380 Fragaria vesca HOM05D000009 ORTHO05D000008 1.9e-06 56.6 48 54.2
FAN06G1317 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.9e-06 56.6 48 54.2
FAN06G4417 Fragaria x ananassa HOM05D000009 ORTHO05D001461 1.9e-06 56.6 48 54.2
Glyma.03G034900 Glycine max HOM05D000009 ORTHO05D000008 1.9e-06 56.6 63 52.4
Glyma.03G037000 Glycine max HOM05D000009 ORTHO05D000008 1.9e-06 56.6 63 50.8
Lj3g0007540 Lotus japonicus HOM05D000009 ORTHO05D000008 1.9e-06 56.6 141 29.8
Medtr3g022570 Medicago truncatula HOM05D000009 ORTHO05D000008 1.9e-06 56.6 128 35.2
QL04p010600 Quercus lobata HOM05D000009 ORTHO05D000008 1.9e-06 56.6 97 33.0
RcHm_v2.0_Chr5g0044571 Rosa chinensis HOM05D000009 ORTHO05D000008 1.9e-06 56.6 134 30.6
arahy.Tifrunner.gnm1.ann1.4IV72F Arachis hypogaea HOM05D000009 ORTHO05D000008 2.4e-06 56.2 103 33.0
arahy.Tifrunner.gnm1.ann1.UGP9YM Arachis hypogaea HOM05D000009 ORTHO05D000008 2.4e-06 56.2 103 34.0
Cpa.g.sc10.213 Carica papaya HOM05D000009 ORTHO05D000008 2.4e-06 56.2 113 33.6
CiPaw.14G013600 Carya illinoinensis HOM05D000009 ORTHO05D000008 2.4e-06 56.2 108 31.5
MD07G1057200 Malus domestica HOM05D000009 ORTHO05D000008 2.4e-06 56.2 128 43.0
Potri.001G379700 Populus trichocarpa HOM05D000009 ORTHO05D000008 2.4e-06 56.2 80 47.5
Potri.017G015300 Populus trichocarpa HOM05D000009 ORTHO05D000008 2.4e-06 56.2 43 62.8
CANSAT80G0663 Cannabis sativa HOM05D000009 ORTHO05D000008 3.2e-06 55.8 146 28.8
Glyma.03G039218 Glycine max HOM05D000009 ORTHO05D000008 3.2e-06 55.8 118 33.1
MD07G1057100 Malus domestica HOM05D000009 ORTHO05D000008 3.2e-06 55.8 127 30.7
Glyma.03G037300 Glycine max HOM05D000009 ORTHO05D000008 4.2e-06 55.5 118 33.1
Glyma.03G038800 Glycine max HOM05D000009 ORTHO05D000008 4.2e-06 55.5 63 50.8
TPR.G36958 Trifolium pratense HOM05D000009 ORTHO05D000008 4.2e-06 55.5 112 32.1
CiPaw.14G109700 Carya illinoinensis HOM05D000009 ORTHO05D000008 5.5e-06 55.1 109 35.8
FAN01G1996 Fragaria x ananassa HOM05D000009 ORTHO05D001461 5.5e-06 55.1 48 52.1
MD03G1016000 Malus domestica HOM05D000009 ORTHO05D000008 5.5e-06 55.1 126 32.5
Glyma.13G194500 Glycine max HOM05D000009 ORTHO05D000008 7.1e-06 54.7 129 30.2
Glyma.U031103 Glycine max HOM05D000009 ORTHO05D000008 7.1e-06 54.7 63 50.8
Medtr8g038590 Medicago truncatula HOM05D000009 ORTHO05D000008 7.1e-06 54.7 129 29.5
VMungo1127G0909 Vigna mungo HOM05D000009 ORTHO05D000008 7.1e-06 54.7 145 29.7
CiPaw.14G107400 Carya illinoinensis HOM05D000009 ORTHO05D000008 9.3e-06 54.3 130 28.5
Ca_23944_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 9.3e-06 54.3 141 29.1
Glyma.03G039300 Glycine max HOM05D000009 ORTHO05D000008 9.3e-06 54.3 118 33.1
Glyma.13G184800 Glycine max HOM05D000009 ORTHO05D000008 9.3e-06 54.3 107 31.8
Lj3g0023701 Lotus japonicus HOM05D000009 ORTHO05D000008 9.3e-06 54.3 141 29.1
Potri.001G029300 Populus trichocarpa HOM05D000009 ORTHO05D000008 9.3e-06 54.3 140 28.6
QL04p014006 Quercus lobata HOM05D000009 ORTHO05D000008 9.3e-06 54.3 106 34.9
RcHm_v2.0_Chr5g0044661 Rosa chinensis HOM05D000009 ORTHO05D000008 9.3e-06 54.3 113 31.0


User provided reference genes

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