Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32219 Trifolium pratense HOM05D004463 ORTHO05D004724 1.4e-60 237.3 273 100.0
ClCG02G004610 Citrullus lanatus HOM05D004463 ORTHO05D004724 2.3e-42 176.8 280 83.9
arahy.Tifrunner.gnm1.ann1.0JY1T4 Arachis hypogaea HOM05D004463 ORTHO05D004724 3.9e-42 176.0 274 85.0
arahy.Tifrunner.gnm1.ann1.2L6AT5 Arachis hypogaea HOM05D004463 ORTHO05D004724 3.9e-42 176.0 274 85.0
MELO3C013423.2 Cucumis melo HOM05D004463 ORTHO05D004724 1.9e-41 173.7 280 83.6
CsaV3_7G000350 Cucumis sativus L. HOM05D004463 ORTHO05D004724 2.5e-41 173.3 280 83.6
QL11p046341 Quercus lobata HOM05D004463 ORTHO05D004724 3.6e-40 169.5 275 82.2
Ca_15338_v3 Cicer arietinum L. HOM05D004463 ORTHO05D004724 8.1e-40 168.3 279 83.5
Sed0022229 Sechium edule HOM05D004463 ORTHO05D004724 1.1e-39 167.9 260 83.8
Glyma.04G008700 Glycine max HOM05D004463 ORTHO05D004724 3.1e-39 166.4 276 79.0
Glyma.06G008500 Glycine max HOM05D004463 ORTHO05D004724 6.9e-39 165.2 279 81.4
Lalb_Chr23g0265191 Lupinus albus HOM05D004463 ORTHO05D004724 1.2e-38 164.5 278 82.0
VMungo1309G0843 Vigna mungo HOM05D000018 ORTHO05D001040 1.5e-38 164.1 277 80.5
Lj1g0018700 Lotus japonicus HOM05D004463 ORTHO05D004724 2.0e-38 163.7 282 80.5
Gohir.A03G199000 Gossypium hirsutum HOM05D004463 ORTHO05D004724 4.4e-38 162.5 259 81.1
Phvul.009G003600 Phaseolus vulgaris HOM05D004463 ORTHO05D004724 7.6e-38 161.8 282 80.1
Potri.004G161800 Populus trichocarpa HOM05D004463 ORTHO05D004724 2.2e-37 160.2 272 79.0
Gohir.D02G220400 Gossypium hirsutum HOM05D004463 ORTHO05D004724 2.9e-37 159.8 255 82.4
Duzib248G1389 Durio zibethinus HOM05D004463 ORTHO05D004724 3.8e-37 159.5 273 81.0
MD10G1063900 Malus domestica HOM05D004463 ORTHO05D004724 4.9e-37 159.1 274 84.7
COL.COLO4_26036 Corchorus olitorius HOM05D004463 ORTHO05D004724 9.3e-36 154.8 273 80.2
Gorai.005G248300 Gossypium raimondii HOM05D004463 ORTHO05D004724 9.3e-36 154.8 263 70.7
Atru.chr5.3137 Acer truncatum HOM05D004463 ORTHO05D004724 3.5e-35 152.9 253 81.0
CANSAT11G2458 Cannabis sativa HOM05D004463 ORTHO05D004724 7.8e-35 151.8 280 78.2
PGR042G1049 Punica granatum HOM05D004463 ORTHO05D004724 7.8e-35 151.8 259 81.1
Cpa.g.sc150.22 Carica papaya HOM05D004463 ORTHO05D004724 1.1e-33 147.9 274 78.5
Ciclev10029089m.g Citrus clementina HOM05D004463 ORTHO05D004724 1.9e-33 147.1 263 77.9
MD00G1040200 Malus domestica HOM05D004463 ORTHO05D004724 1.9e-33 147.1 282 77.3
RcHm_v2.0_Chr6g0267601 Rosa chinensis HOM05D004463 ORTHO05D004724 1.3e-32 144.4 275 78.5
TWI31G1301 Tripterygium wilfordii HOM05D004463 ORTHO05D004724 2.8e-32 143.3 276 75.7
Prupe.8G085500 Prunus persica HOM05D004463 ORTHO05D004724 1.4e-31 141.0 281 70.1
CiPaw.13G045000 Carya illinoinensis HOM05D004463 ORTHO05D004724 1.5e-30 137.5 255 79.6
CiPaw.14G035900 Carya illinoinensis HOM05D004463 ORTHO05D004724 9.9e-30 134.8 252 79.4
Sabra04G0108800 Salix brachista HOM05D004463 ORTHO05D004724 2.9e-29 133.3 252 75.8
Psat5g004520 Pisum sativum HOM05D004463 ORTHO05D004724 4.9e-29 132.5 276 53.6
Psat5g004400 Pisum sativum HOM05D004463 ORTHO05D004724 1.1e-28 131.3 274 62.4
Eucgr.I01324 Eucalyptus grandis HOM05D004463 ORTHO05D004724 1.9e-28 130.6 255 83.5
CAN.G95.2 Capsicum annuum HOM05D004463 ORTHO05D004724 1.2e-27 127.9 286 72.4
Manes.15G189900 Manihot esculenta HOM05D004463 ORTHO05D004724 2.1e-27 127.1 273 71.8
Hund26868 Selenicereus undatus HOM05D004463 ORTHO05D004724 3.5e-27 126.3 284 79.2
Thecc.02G075900 Theobroma cacao HOM05D004463 ORTHO05D004724 1.0e-26 124.8 273 76.6
Hund00218 Selenicereus undatus HOM05D004463 ORTHO05D004724 6.7e-26 122.1 251 70.1
Dinv42004 Davidia involucrata HOM05D004463 ORTHO05D004724 5.6e-25 119.0 273 76.2
CiPaw.06G128800 Carya illinoinensis HOM05D004463 ORTHO05D004724 2.1e-24 117.1 257 75.5
Manes.17G001400 Manihot esculenta HOM05D004463 ORTHO05D004724 2.1e-24 117.1 273 72.5
THA.LOC104807766 Tarenaya hassleriana HOM05D004463 ORTHO05D004724 2.8e-24 116.7 256 75.8
Cc02_g16980 Coffea canephora HOM05D004463 ORTHO05D004724 8.1e-24 115.2 275 73.8
Actinidia27858 Actinidia chinensis HOM05D000578 ORTHO05D000422 1.1e-23 114.8 281 70.8
Duzib052G0336 Durio zibethinus HOM05D004463 ORTHO05D004724 1.8e-23 114.0 255 74.9
Nitab4.5_0001317g0040 Nicotiana tabacum HOM05D004463 ORTHO05D004724 2.6e-22 110.2 248 73.4
Actinidia00571 Actinidia chinensis HOM05D004463 ORTHO05D004724 3.4e-22 109.8 262 71.8
Haze_03437 Corylus avellana HOM05D004463 ORTHO05D004724 4.5e-22 109.4 248 75.0
GSVIVG01024180001 Vitis vinifera HOM05D004463 ORTHO05D004724 5.8e-22 109.0 252 74.2
Dinv39485 Davidia involucrata HOM05D004463 ORTHO05D004724 7.6e-22 108.6 239 62.3
Sed0016215 Sechium edule HOM05D004463 ORTHO05D004724 1.0e-21 108.2 255 78.4
Oeu036635.1 Olea europaea HOM05D004463 ORTHO05D004724 1.7e-21 107.5 273 73.3
ECA232G1454 Erigeron canadensis HOM05D004463 ORTHO05D004724 8.4e-21 105.1 256 73.4
Sopen10g024240 Solanum pennellii HOM05D004463 ORTHO05D004724 1.4e-20 104.4 267 68.9
HanXRQChr05g0143421 Helianthus annuus HOM05D004463 ORTHO05D004724 5.5e-20 102.4 134 87.3
Oeu055628.1 Olea europaea HOM05D004463 ORTHO05D004724 5.5e-20 102.4 254 72.8
Solyc10g054330.3 Solanum lycopersicum HOM05D004463 ORTHO05D004724 5.5e-20 102.4 270 68.5
PGSC0003DMG400026665 Solanum tuberosum HOM05D004463 ORTHO05D004724 7.1e-20 102.1 271 68.3
Dinv23459 Davidia involucrata HOM05D004463 ORTHO05D004724 2.1e-19 100.5 273 74.4
TWI75G1243 Tripterygium wilfordii HOM05D004463 ORTHO05D004724 2.1e-19 100.5 273 66.3
FAN15G3389 Fragaria x ananassa HOM05D004463 ORTHO05D004724 6.0e-19 99.0 276 75.0
FAN24G1814 Fragaria x ananassa HOM05D004463 ORTHO05D004724 6.0e-19 99.0 257 76.7
Zm00001eb393940 Zea mays HOM05D004463 ORTHO05D004724 1.0e-18 98.2 256 66.0
FAN27G0878 Fragaria x ananassa HOM05D004463 ORTHO05D004724 1.8e-18 97.4 273 75.1
Oeu046135.1 Olea europaea HOM05D004463 ORTHO05D004724 2.3e-18 97.1 253 73.1
TPR.G32170 Trifolium pratense HOM05D004463 ORTHO05D004724 2.3e-18 97.1 69 81.2
DCAR_022913 Daucus carota HOM05D004463 ORTHO05D004724 3.0e-18 96.7 189 82.0
FvH4_2g10323 Fragaria vesca HOM05D004463 ORTHO05D004724 3.0e-18 96.7 257 75.9
FAN20G1990 Fragaria x ananassa HOM05D004463 ORTHO05D004724 3.9e-18 96.3 273 73.6
Rhsim05G0068600 Rhododendron simsii HOM05D004463 ORTHO05D004724 5.1e-18 95.9 260 71.5
Peaxi162Scf00538g00125 Petunia axillaris HOM05D004463 ORTHO05D004724 8.7e-18 95.1 261 37.9
THA.LOC104813804 Tarenaya hassleriana HOM05D004463 ORTHO05D004724 8.7e-18 95.1 255 73.3
GSVIVG01009823001 Vitis vinifera HOM05D004463 ORTHO05D004724 1.3e-16 91.3 69 78.3
Manes.05G152600 Manihot esculenta HOM05D004463 ORTHO05D004724 1.6e-16 90.9 231 74.0
Duzib132G0628 Durio zibethinus HOM05D004463 ORTHO05D004724 4.8e-16 89.4 228 76.8
A06p48750 Brassica napus HOM05D004463 ORTHO05D004724 4.1e-15 86.3 134 81.3
C07p63410 Brassica napus HOM05D004463 ORTHO05D004724 4.1e-15 86.3 134 81.3
BolC7t46753H Brassica oleracea HOM05D004463 ORTHO05D004724 4.1e-15 86.3 134 81.3
Sc25g0002840 Simmondsia chinensis HOM05D004463 ORTHO05D004724 4.1e-15 86.3 50 76.0
Os10g0545300 Oryza sativa ssp. japonica HOM05D004463 ORTHO05D004724 9.0e-15 85.1 256 69.1
Thecc.08G037600 Theobroma cacao HOM05D004463 ORTHO05D004724 9.0e-15 85.1 51 74.5
Hma1.2p1_0066F.1_g035800 Hydrangea macrophylla HOM05D004463 ORTHO05D004724 1.5e-14 84.3 214 76.6
Atru.chr13.360 Acer truncatum HOM05D004463 ORTHO05D004724 2.6e-14 83.6 50 74.0
Migut.B00180 Erythranthe guttata HOM05D004463 ORTHO05D004724 4.5e-14 82.8 180 82.2
AL7G10930 Arabidopsis lyrata HOM05D004463 ORTHO05D004724 5.8e-14 82.4 217 71.4
EL10Ac1g00556 Beta vulgaris HOM05D004463 ORTHO05D004724 7.6e-14 82.0 333 61.3
BraA06t27741Z Brassica rapa HOM05D004463 ORTHO05D004724 1.0e-13 81.6 135 80.7
CSS0016875 Camellia sinensis var. sinensis HOM05D004463 ORTHO05D004724 3.8e-13 79.7 227 75.3
HPP92_007060 Vanilla planifolia HOM05D004463 ORTHO05D004724 3.8e-13 79.7 255 70.6
THA.LOC104804116 Tarenaya hassleriana HOM05D004463 ORTHO05D004724 5.0e-13 79.3 50 70.0
A07p41130 Brassica napus HOM05D004463 ORTHO05D004724 6.5e-13 79.0 71 66.2
Ciclev10002195m.g Citrus clementina HOM05D004463 ORTHO05D004724 6.5e-13 79.0 69 73.9
Rhsim11G0183400 Rhododendron simsii HOM05D000078 ORTHO05D004724 6.5e-13 79.0 51 70.6
TAR369G0673 Trochodendron aralioides HOM05D004463 ORTHO05D004724 8.4e-13 78.6 51 76.5
C06p49550 Brassica napus HOM05D004463 ORTHO05D004724 1.1e-12 78.2 71 73.2
BolC6t39994H Brassica oleracea HOM05D004463 ORTHO05D004724 1.1e-12 78.2 71 73.2
Aqoxy4G02979 Aquilegia oxysepala HOM05D004463 ORTHO05D004724 1.4e-12 77.8 253 69.6
THA.LOC104809337 Tarenaya hassleriana HOM05D004463 ORTHO05D004724 1.9e-12 77.4 225 71.1
CARHR247750 Cardamine hirsuta HOM05D004463 ORTHO05D004724 2.5e-12 77.0 51 60.8
CDE02G2851 Ceratophyllum demersum HOM05D003292 ORTHO05D004237 2.5e-12 77.0 48 72.9
Potri.005G234700 Populus trichocarpa HOM05D004463 ORTHO05D004724 4.2e-12 76.3 56 67.9
AL2G35540 Arabidopsis lyrata HOM05D004463 ORTHO05D004724 5.5e-12 75.9 49 67.3
Carub.0002s2242 Capsella rubella HOM05D004463 ORTHO05D004724 5.5e-12 75.9 49 67.3
PSO384G1624 Papaver somniferum HOM05D004463 ORTHO05D004724 7.1e-12 75.5 250 71.2
PSO339G5998 Papaver somniferum HOM05D004463 ORTHO05D004724 9.3e-12 75.1 50 70.0
PSO648G0094 Papaver somniferum HOM05D004463 ORTHO05D004724 9.3e-12 75.1 50 70.0
Thhalv10019006m.g Eutrema salsugineum HOM05D004463 ORTHO05D004724 1.2e-11 74.7 66 78.8
AUR62014431 Chenopodium quinoa HOM05D004463 ORTHO05D004724 1.6e-11 74.3 43 74.4
Sabra05G0180900 Salix brachista HOM05D004463 ORTHO05D004724 1.6e-11 74.3 56 64.3
HPP92_007058 Vanilla planifolia HOM05D004463 ORTHO05D004724 2.7e-11 73.6 48 68.8
Zm00001eb022680 Zea mays HOM05D004463 ORTHO05D004724 2.7e-11 73.6 263 67.3
SGA_v2.0_scaffold326G48748 Striga asiatica HOM05D004463 ORTHO05D004724 6.1e-11 72.4 69 69.6
TWI36G1578 Tripterygium wilfordii HOM05D004463 ORTHO05D004724 7.9e-11 72.0 51 62.7
Sp5g30690 Schrenkiella parvula HOM05D004463 ORTHO05D004724 1.8e-10 70.9 47 72.3
TAR636G2492 Trochodendron aralioides HOM05D004463 ORTHO05D004724 1.8e-10 70.9 51 68.6
AT1G75560 Arabidopsis thaliana HOM05D004463 ORTHO05D004724 2.3e-10 70.5 51 64.7
Aa31LG4G5800 Aethionema arabicum HOM05D004463 ORTHO05D004724 3.0e-10 70.1 52 61.5
Nn5g29212 Nelumbo nucifera HOM05D004463 ORTHO05D004724 6.7e-10 68.9 152 74.3
PSO339G4128 Papaver somniferum HOM05D004463 ORTHO05D004724 1.9e-09 67.4 48 66.7
COL.COLO4_14964 Corchorus olitorius HOM05D004463 ORTHO05D004724 2.5e-09 67.0 51 64.7
CSS0035906 Camellia sinensis var. sinensis HOM05D004463 ORTHO05D004724 4.3e-09 66.2 51 64.7
AUR62034566 Chenopodium quinoa HOM05D004463 ORTHO05D004724 7.4e-09 65.5 57 56.1
Duzib106G1221 Durio zibethinus HOM05D004463 ORTHO05D004724 7.4e-09 65.5 51 66.7
Lsat_1_v5_gn_8_16561 Lactuca sativa HOM05D004463 ORTHO05D004724 7.4e-09 65.5 50 64.0
Lj9P382T32 Lonicera japonica HOM05D004463 ORTHO05D004724 1.3e-08 64.7 145 73.1
Thecc.10G047100 Theobroma cacao HOM05D004463 ORTHO05D004724 1.3e-08 64.7 51 64.7
Rhsim09G0164600 Rhododendron simsii HOM05D004463 ORTHO05D004724 1.6e-08 64.3 48 64.6
SEGI_31170 Sequoiadendron giganteum HOM05D004463 ORTHO05D004724 1.6e-08 64.3 44 65.9
Dinv25993 Davidia involucrata HOM05D004463 ORTHO05D004724 3.7e-08 63.2 51 62.7
QL08p059074 Quercus lobata HOM05D004463 ORTHO05D004724 3.7e-08 63.2 48 64.6
Cfa001504 Carpinus fangiana HOM05D001680 ORTHO05D001596 6.3e-08 62.4 51 64.7
Haze_17039 Corylus avellana HOM05D001446 ORTHO05D001360 6.3e-08 62.4 51 64.7
MBI19_g03564_MAGBIO Magnolia biondii HOM05D004463 ORTHO05D004724 6.3e-08 62.4 227 72.7
Lj8C86T7 Lonicera japonica HOM05D004463 ORTHO05D004724 8.2e-08 62.0 51 60.8
ECA233G0628 Erigeron canadensis HOM05D001446 ORTHO05D001360 1.1e-07 61.6 49 57.1
Nn6g32238 Nelumbo nucifera HOM05D004463 ORTHO05D004724 1.1e-07 61.6 34 85.3
FAN03G3339 Fragaria x ananassa HOM05D004463 ORTHO05D004724 1.4e-07 61.2 48 66.7
Hma1.2p1_0727F.1_g209210 Hydrangea macrophylla HOM05D004463 ORTHO05D004724 1.4e-07 61.2 51 58.8
Manes.10G032800 Manihot esculenta HOM05D004463 ORTHO05D004724 1.4e-07 61.2 50 58.0
GSVIVG01011366001 Vitis vinifera HOM05D002216 ORTHO05D002011 4.1e-07 59.7 51 58.8
FvH4_7g21972 Fragaria vesca HOM05D004463 ORTHO05D004724 5.3e-07 59.3 48 64.6
FAN01G1741 Fragaria x ananassa HOM05D004463 ORTHO05D004724 5.3e-07 59.3 48 64.6
FAN06G0682 Fragaria x ananassa HOM05D004463 ORTHO05D004724 5.3e-07 59.3 48 64.6
FAN06G1248 Fragaria x ananassa HOM05D004463 ORTHO05D004724 5.3e-07 59.3 48 64.6
Gohir.D10G224732 Gossypium hirsutum HOM05D004463 ORTHO05D004724 5.3e-07 59.3 46 63.0
AUR62010398 Chenopodium quinoa HOM05D004463 ORTHO05D004724 6.9e-07 58.9 109 88.1
Prupe.2G231800 Prunus persica HOM05D004463 ORTHO05D004724 6.9e-07 58.9 48 62.5
RcHm_v2.0_Chr1g0366331 Rosa chinensis HOM05D004463 ORTHO05D004724 6.9e-07 58.9 48 64.6
MD01G1124300 Malus domestica HOM05D004463 ORTHO05D004724 1.5e-06 57.8 48 58.3
Sc20g0004810 Simmondsia chinensis HOM05D004463 ORTHO05D004724 1.5e-06 57.8 35 71.4
FAN10G2262 Fragaria x ananassa HOM05D004463 ORTHO05D004724 2.0e-06 57.4 212 68.9
Peaxi162Scf00684g00132 Petunia axillaris HOM05D004463 ORTHO05D004724 2.0e-06 57.4 75 54.7
GSVIVG01016581001 Vitis vinifera HOM05D004463 ORTHO05D004724 2.0e-06 57.4 51 56.9
Gorai.011G255700 Gossypium raimondii HOM05D004463 ORTHO05D004724 3.4e-06 56.6 46 60.9
AUR62016820 Chenopodium quinoa HOM05D004463 ORTHO05D004724 5.9e-06 55.8 106 88.7


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