Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 3.6e-45 184.5 91 100.0
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 8.7e-39 163.3 92 88.0
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 8.1e-37 156.8 89 86.5
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 4.5e-35 151.0 85 88.2
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 6.9e-28 127.1 91 74.7
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 6.9e-28 127.1 91 74.7
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 1.2e-27 126.3 91 71.4
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 4.5e-27 124.4 89 70.8
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 6.0e-24 114.0 86 69.8
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 7.9e-24 113.6 85 63.5
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 1.0e-23 113.2 87 64.4
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 1.8e-23 112.5 87 64.4
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 8.7e-23 110.2 92 59.8
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.1e-22 109.8 83 67.5
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 1.5e-22 109.4 83 65.1
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 1.5e-22 109.4 88 64.8
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 2.5e-22 108.6 84 67.9
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 2.5e-22 108.6 86 65.1
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 3.3e-22 108.2 82 69.5
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 3.3e-22 108.2 82 69.5
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 5.7e-22 107.5 88 64.8
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 5.7e-22 107.5 87 64.4
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 5.7e-22 107.5 87 64.4
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 1.3e-21 106.3 62 77.4
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 1.6e-21 105.9 90 61.1
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 1.6e-21 105.9 84 64.3
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 2.2e-21 105.5 82 67.1
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 2.2e-21 105.5 61 80.3
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 3.7e-21 104.8 88 63.6
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 3.7e-21 104.8 96 57.3
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 3.7e-21 104.8 83 63.9
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 3.7e-21 104.8 91 60.4
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 8.2e-21 103.6 82 63.4
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 8.2e-21 103.6 88 62.5
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 8.2e-21 103.6 88 62.5
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 1.1e-20 103.2 89 60.7
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 1.4e-20 102.8 86 64.0
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 1.4e-20 102.8 86 64.0
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 1.4e-20 102.8 89 60.7
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 1.8e-20 102.4 89 62.9
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 2.4e-20 102.1 82 65.9
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 2.4e-20 102.1 60 76.7
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 2.4e-20 102.1 83 61.4
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 3.1e-20 101.7 83 62.7
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 3.1e-20 101.7 86 66.3
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 3.1e-20 101.7 75 68.0
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 4.1e-20 101.3 83 65.1
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 4.1e-20 101.3 83 65.1
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 4.1e-20 101.3 87 62.1
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 5.3e-20 100.9 89 60.7
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 5.3e-20 100.9 63 77.8
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 9.0e-20 100.1 90 61.1
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 9.0e-20 100.1 82 64.6
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 9.0e-20 100.1 93 61.3
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 9.0e-20 100.1 60 78.3
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 9.0e-20 100.1 60 78.3
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 9.0e-20 100.1 82 65.9
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 1.2e-19 99.8 82 69.5
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 1.2e-19 99.8 91 61.5
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 1.2e-19 99.8 82 62.2
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 1.5e-19 99.4 95 57.9
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 1.5e-19 99.4 90 60.0
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 1.5e-19 99.4 96 55.2
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.5e-19 99.4 55 81.8
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 1.5e-19 99.4 87 60.9
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 2.0e-19 99.0 85 62.4
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 2.0e-19 99.0 82 65.9
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 2.6e-19 98.6 87 59.8
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 2.6e-19 98.6 81 63.0
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 4.5e-19 97.8 93 59.1
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 4.5e-19 97.8 93 59.1
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 4.5e-19 97.8 86 60.5
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 1.0e-18 96.7 93 58.1
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 1.0e-18 96.7 54 81.5
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 1.7e-18 95.9 69 65.2
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 1.7e-18 95.9 86 61.6
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 1.7e-18 95.9 69 65.2
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 1.7e-18 95.9 69 65.2
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 3.8e-18 94.7 92 57.6
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 3.8e-18 94.7 86 60.5
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 3.8e-18 94.7 55 78.2
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 1.4e-17 92.8 87 54.0
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 1.6e-16 89.4 55 72.7
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 2.1e-16 89.0 55 70.9
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 6.1e-16 87.4 81 59.3
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 3.0e-15 85.1 83 56.6
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 3.9e-15 84.7 76 60.5
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 8.8e-15 83.6 76 59.2
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 1.5e-14 82.8 78 59.0
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 1.9e-14 82.4 74 56.8
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 2.5e-14 82.0 70 60.0
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 7.4e-14 80.5 53 73.6
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 7.4e-14 80.5 77 57.1
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 9.7e-14 80.1 76 56.6
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 4.8e-13 77.8 71 59.2
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 6.3e-13 77.4 71 56.3
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 1.4e-12 76.3 52 69.2
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 1.8e-12 75.9 71 57.7
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 3.1e-12 75.1 49 71.4
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 4.1e-12 74.7 78 55.1
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 5.3e-12 74.3 53 71.7
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 2.6e-11 72.0 50 74.0
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 2.6e-11 72.0 74 54.1
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 2.6e-11 72.0 64 56.2
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 3.4e-11 71.6 42 76.2
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 1.0e-10 70.1 78 51.3
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 3.8e-10 68.2 53 60.4
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 6.5e-10 67.4 56 58.9
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 6.5e-10 67.4 77 51.9
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 3.0e-07 58.5 43 69.8
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 3.0e-07 58.5 43 69.8


User provided reference genes

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